RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 CASP3P42574 277 aa12.91□□□□□ -0.34
TPM1-223ENST00000560445 KIR3DL1P43629 444 aa12.91□□□□□ -0.34
TPM1-223ENST00000560445 CDK9P50750 372 aaKnown RBP12.91□□□□□ -0.34
TPM1-223ENST00000560445 ZNF763Q0D2J5 394 aa12.91□□□□□ -0.34
TPM1-223ENST00000560445 RCAN2Q14206 197 aa12.91□□□□□ -0.34
TPM1-223ENST00000560445 UNC50Q53HI1 259 aa12.91□□□□□ -0.34
TPM1-223ENST00000560445 ULK2Q8IYT8 1036 aa12.91□□□□□ -0.34
TPM1-223ENST00000560445 FAM9CQ8IZT9 166 aa12.91□□□□□ -0.34
TPM1-223ENST00000560445 OR1J4Q8NGS1 313 aa12.91□□□□□ -0.34
TPM1-223ENST00000560445 CTHRC1Q96CG8 243 aa12.91□□□□□ -0.34
TPM1-223ENST00000560445 ZNF559Q9BR84 538 aa12.91□□□□□ -0.34
TPM1-223ENST00000560445 OSBPL11Q9BXB4 747 aa12.91□□□□□ -0.34
TPM1-223ENST00000560445 NXF5Q9H1B4 397 aaKnown RBP12.91□□□□□ -0.34
TPM1-223ENST00000560445 RRAGDQ9NQL2 400 aaPredicted RBP12.91□□□□□ -0.34
TPM1-223ENST00000560445 SIRT5Q9NXA8 310 aa12.91□□□□□ -0.34
TPM1-223ENST00000560445 TAS2R9Q9NYW1 312 aa12.91□□□□□ -0.34
TPM1-223ENST00000560445 FOXD3Q9UJU5 478 aaPredicted RBP12.91□□□□□ -0.34
TPM1-223ENST00000560445 DLGAP4Q9Y2H0 992 aa12.91□□□□□ -0.34
TPM1-223ENST00000560445 FAM215AQ9Y5M1 114 aa12.91□□□□□ -0.34
TPM1-223ENST00000560445 INTS1Q8N201 2190 aaKnown RBP12.91□□□□□ -0.34
TPM1-223ENST00000560445 OR6C70A6NIJ9 312 aa12.9□□□□□ -0.34
TPM1-223ENST00000560445 WASHC1A8K0Z3 465 aa12.9□□□□□ -0.34
TPM1-223ENST00000560445 TO15178 435 aa12.9□□□□□ -0.34
TPM1-223ENST00000560445 TOXO94900 526 aa12.9□□□□□ -0.34
TPM1-223ENST00000560445 IL2RAP01589 272 aa12.9□□□□□ -0.34
TPM1-223ENST00000560445 ABCB1P08183 1280 aaPredicted RBP12.9□□□□□ -0.34
TPM1-223ENST00000560445 SBK3P0C264 359 aa12.9□□□□□ -0.34
TPM1-223ENST00000560445 CT62P0C5K7 136 aa12.9□□□□□ -0.34
TPM1-223ENST00000560445 FAM153BP0C7A2 387 aa12.9□□□□□ -0.34
TPM1-223ENST00000560445 IGFBP2P18065 325 aa12.9□□□□□ -0.34
TPM1-223ENST00000560445 NTSP30990 170 aa12.9□□□□□ -0.34
TPM1-223ENST00000560445 DUSP8Q13202 625 aa12.9□□□□□ -0.34
TPM1-223ENST00000560445 MYBPHQ13203 477 aa12.9□□□□□ -0.34
TPM1-223ENST00000560445 CDSNQ15517 529 aa12.9□□□□□ -0.34
TPM1-223ENST00000560445 FAM153CQ494X1 144 aa12.9□□□□□ -0.34
TPM1-223ENST00000560445 NHSL2Q5HYW2 709 aa12.9□□□□□ -0.34
TPM1-223ENST00000560445 SPDYAQ5MJ70 313 aa12.9□□□□□ -0.34
TPM1-223ENST00000560445 TIGD3Q6B0B8 471 aa12.9□□□□□ -0.34
TPM1-223ENST00000560445 ENPP6Q6UWR7 440 aa12.9□□□□□ -0.34
TPM1-223ENST00000560445 ZYG11AQ6WRX3 759 aa12.9□□□□□ -0.34
TPM1-223ENST00000560445 IKBIPQ70UQ0 350 aa12.9□□□□□ -0.34
TPM1-223ENST00000560445 CCDC71Q8IV32 467 aaPredicted RBP12.9□□□□□ -0.34
TPM1-223ENST00000560445 DMRTC2Q8IXT2 367 aaPredicted RBP12.9□□□□□ -0.34
TPM1-223ENST00000560445 CCNYL1Q8N7R7 359 aa12.9□□□□□ -0.34
TPM1-223ENST00000560445 CCDC63Q8NA47 563 aa12.9□□□□□ -0.34
TPM1-223ENST00000560445 OR52R1Q8NGF1 315 aa12.9□□□□□ -0.34
TPM1-223ENST00000560445 DOK4Q8TEW6 326 aa12.9□□□□□ -0.34
TPM1-223ENST00000560445 UBLCP1Q8WVY7 318 aaPredicted RBP12.9□□□□□ -0.34
TPM1-223ENST00000560445 OMA1Q96E52 524 aa12.9□□□□□ -0.34
TPM1-223ENST00000560445 BBS4Q96RK4 519 aa12.9□□□□□ -0.34
TPM1-223ENST00000560445 HBEGFQ99075 208 aa12.9□□□□□ -0.34
TPM1-223ENST00000560445 ITPAQ9BY32 194 aa12.9□□□□□ -0.34
TPM1-223ENST00000560445 ACPTQ9BZG2 426 aa12.9□□□□□ -0.34
TPM1-223ENST00000560445 SLC6A15Q9H2J7 730 aa12.9□□□□□ -0.34
TPM1-223ENST00000560445 MID1IP1Q9NPA3 183 aa12.9□□□□□ -0.34
TPM1-223ENST00000560445 SPRR3Q9UBC9 169 aa12.9□□□□□ -0.34
TPM1-223ENST00000560445 TBK1Q9UHD2 729 aa12.9□□□□□ -0.34
TPM1-223ENST00000560445 ZNF639Q9UID6 485 aa12.9□□□□□ -0.34
TPM1-223ENST00000560445 MRTO4Q9UKD2 239 aaKnown RBP12.9□□□□□ -0.34
TPM1-223ENST00000560445 ANKRD17O75179 2603 aaKnown RBP12.9□□□□□ -0.35
TPM1-223ENST00000560445 NINQ8N4C6 2090 aa12.89□□□□□ -0.35
TPM1-223ENST00000560445 NKX2-6A6NCS4 301 aa12.89□□□□□ -0.35
TPM1-223ENST00000560445 PRAMEF25A6NGN4 478 aa12.89□□□□□ -0.35
TPM1-223ENST00000560445 GOLGA8RI6L899 631 aa12.89□□□□□ -0.35
TPM1-223ENST00000560445 PPP6CO00743 305 aa12.89□□□□□ -0.35
TPM1-223ENST00000560445 CBR3O75828 277 aa12.89□□□□□ -0.35
TPM1-223ENST00000560445 ZWINTO95229 277 aa12.89□□□□□ -0.35
TPM1-223ENST00000560445 EPPINO95925 133 aa12.89□□□□□ -0.35
TPM1-223ENST00000560445 CHEK2O96017 543 aa12.89□□□□□ -0.35
TPM1-223ENST00000560445 IL3P08700 152 aa12.89□□□□□ -0.35
TPM1-223ENST00000560445 ANXA4P09525 319 aaPredicted RBP12.89□□□□□ -0.35
TPM1-223ENST00000560445 RFPL3SP0C7P2 107 aa12.89□□□□□ -0.35
TPM1-223ENST00000560445 S1PR1P21453 382 aa12.89□□□□□ -0.35
TPM1-223ENST00000560445 GCAP28676 217 aa12.89□□□□□ -0.35
TPM1-223ENST00000560445 IL12BP29460 328 aa12.89□□□□□ -0.35
TPM1-223ENST00000560445 TRPC1P48995 793 aa12.89□□□□□ -0.35
TPM1-223ENST00000560445 DNAJB13P59910 316 aa12.89□□□□□ -0.35
TPM1-223ENST00000560445 EEF1A1P68104 462 aaKnown RBP12.89□□□□□ -0.35
TPM1-223ENST00000560445 ZNHIT3Q15649 155 aaPredicted RBP12.89□□□□□ -0.35
TPM1-223ENST00000560445 EEF1A1P5Q5VTE0 462 aa12.89□□□□□ -0.35
TPM1-223ENST00000560445 ANGPTL8Q6UXH0 198 aa12.89□□□□□ -0.35
TPM1-223ENST00000560445 RPS27LQ71UM5 84 aaKnown RBP12.89□□□□□ -0.35
TPM1-223ENST00000560445 WDR53Q7Z5U6 358 aaPredicted RBP12.89□□□□□ -0.35
TPM1-223ENST00000560445 CDH24Q86UP0 819 aa12.89□□□□□ -0.35
TPM1-223ENST00000560445 TDRPQ86YL5 185 aa12.89□□□□□ -0.35
TPM1-223ENST00000560445 ZNF295-AS1Q8N0V1 137 aa12.89□□□□□ -0.35
TPM1-223ENST00000560445 ADCY4Q8NFM4 1077 aa12.89□□□□□ -0.35
TPM1-223ENST00000560445 CNRIP1Q96F85 164 aaPredicted RBP12.89□□□□□ -0.35
TPM1-223ENST00000560445 ZFP3Q96NJ6 502 aa12.89□□□□□ -0.35
TPM1-223ENST00000560445 COL21A1Q96P44 957 aa12.89□□□□□ -0.35
TPM1-223ENST00000560445 BTBD9Q96Q07 612 aa12.89□□□□□ -0.35
TPM1-223ENST00000560445 TRMOQ9BU70 441 aa12.89□□□□□ -0.35
TPM1-223ENST00000560445 TXLNGYQ9BZA5 131 aa12.89□□□□□ -0.35
TPM1-223ENST00000560445 PRDM14Q9GZV8 571 aa12.89□□□□□ -0.35
TPM1-223ENST00000560445 UBQLN3Q9H347 655 aa12.89□□□□□ -0.35
TPM1-223ENST00000560445 ACBD3Q9H3P7 528 aa12.89□□□□□ -0.35
TPM1-223ENST00000560445 PROK2Q9HC23 129 aa12.89□□□□□ -0.35
TPM1-223ENST00000560445 SLC35C2Q9NQQ7 365 aa12.89□□□□□ -0.35
TPM1-223ENST00000560445 ZNF629Q9UEG4 869 aaPredicted RBP12.89□□□□□ -0.35
TPM1-223ENST00000560445 ZNF225Q9UK10 706 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms