RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 FAM118AQ9NWS6 357 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 B3GNT3Q9Y2A9 372 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 C7P10643 843 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 F2RP25116 425 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 PRSS3P35030 304 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 ATP4BP51164 291 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 Q8N9G6 341 aaPredicted RBP13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 FNDC8Q8TC99 324 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 BMFQ96LC9 184 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 LIN7CQ9NUP9 197 aaKnown RBP13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 SERPINA12Q8IW75 414 aa13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 C15orf54Q8N8G6 183 aa13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 OR11A1Q9GZK7 315 aa13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 DGKEP52429 567 aa13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 EOGTQ5NDL2 527 aa13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 STEAP3Q658P3 488 aa13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 HRH4Q9H3N8 390 aa13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 PRTFDC1Q9NRG1 225 aa13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 TAS2R16Q9NYV7 291 aa13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 MEGF11A6BM72 1044 aa13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 SYT7O43581 403 aa13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 ADORA3P0DMS8 318 aa13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 APOFQ13790 326 aa13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 PLPP5Q8NEB5 264 aa13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 GINS3Q9BRX5 216 aa13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 C8orf89P0DMQ9 161 aa13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 TAL1P17542 331 aaPredicted RBP13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 SPHARQ15513 63 aa13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 LIPJQ5W064 366 aa13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 BRAT1Q6PJG6 821 aa13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 OR4K1Q8NGD4 311 aa13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 SHDQ96IW2 340 aa13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 CROCCQ5TZA2 2017 aa13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 TGM5O43548 720 aa13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 TMIGD1Q6UXZ0 262 aa13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 RBMXL3Q8N7X1 1067 aaKnown RBP13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 SYT14Q8NB59 555 aa13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 ZNRF4Q8WWF5 429 aa13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 NDRG1Q92597 394 aaKnown RBP13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 DOHHQ9BU89 302 aa13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 CDH20Q9HBT6 801 aa13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 FAM221BA6H8Z2 402 aa13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 LRRC10BA6NIK2 292 aa13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 ZNF736B4DX44 427 aaPredicted RBP13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 MANBAO00462 879 aa13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 BCAS2O75934 225 aaPredicted RBP13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 PENKP01210 267 aaPredicted RBP13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 SERPINA5P05154 406 aa13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 AOC1P19801 751 aa13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 EMX2Q04743 252 aa13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 ZNF74Q16587 644 aa13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 WDR45BQ5MNZ6 344 aa13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 TLCD1Q96CP7 247 aa13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 LGALS12Q96DT0 336 aa13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 P2RX7Q99572 595 aaKnown RBP13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 CACNG2Q9Y698 323 aa13.24□□□□□ -0.29
CSPG4P12-202ENST00000559989 BCKDHBP21953 392 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 DHPSP49366 369 aaPredicted RBP13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 MRPS10P82664 201 aaKnown RBP13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 SUV39H2Q9H5I1 410 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 K7EQM0 130 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 ACOT7O00154 380 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 CCL22O00626 93 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 EBLN1P0CF75 366 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 RAB11AP62491 216 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 ABHD12BQ7Z5M8 362 aaPredicted RBP13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 SULF2Q8IWU5 870 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 OR4N5Q8IXE1 308 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 EBF4Q9BQW3 602 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 ACOT13Q9NPJ3 140 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 PRSS51A0A1B0GVH4 220 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 SLC38A8A6NNN8 435 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 B4GAT1O43505 415 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 ARSFP54793 590 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 GRIN2CQ14957 1233 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 NDNFQ8TB73 568 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 TSSK2Q96PF2 358 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 KCNMB3Q9NPA1 279 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 ZDHHC2Q9UIJ5 367 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 SLC31A2O15432 143 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 OR2T1O43869 369 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 PGCP20142 388 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 OR1E2P47887 323 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 POU4F3Q15319 338 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 EEF1DP3Q658K8 133 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 PAQR3Q6TCH7 311 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 OR9A1PQ8NGU1 263 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 NT5C3BQ969T7 300 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 SGK3Q96BR1 496 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 ZNF599Q96NL3 588 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 OPA3Q9H6K4 179 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 KCNQ2O43526 872 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 OR12D1P0DN82 309 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 TRIM23P36406 574 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 BRCC3P46736 316 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 CD163Q86VB7 1156 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 CHCHD4Q8N4Q1 142 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 HAVCR2Q8TDQ0 301 aa13.23□□□□□ -0.29
CSPG4P12-202ENST00000559989 LMX1AQ8TE12 382 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms