RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 PROX1Q92786 737 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 PEX11GQ96HA9 241 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 PIP5K1AQ99755 562 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 NUDT22Q9BRQ3 303 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 SLC38A1Q9H2H9 487 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 TOR3AQ9H497 397 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 ZNF768Q9H5H4 540 aaKnown RBP11.87□□□□□ -0.51
USP3-213ENST00000559711 PNPLA3Q9NST1 481 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 CUTCQ9NTM9 273 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 PDP2Q9P2J9 529 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 C3orf18Q9UK00 162 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 SLC6A14Q9UN76 642 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 TMEM184BQ9Y519 407 aaPredicted RBP11.87□□□□□ -0.51
USP3-213ENST00000559711 CLDN16Q9Y5I7 305 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 DSPPQ9NZW4 1301 aa11.87□□□□□ -0.51
USP3-213ENST00000559711 USP34Q70CQ2 3546 aa11.86□□□□□ -0.51
USP3-213ENST00000559711 MUC3AQ02505 3323 aa11.86□□□□□ -0.51
USP3-213ENST00000559711 ARID1BQ8NFD5 2236 aaPredicted RBP11.86□□□□□ -0.51
USP3-213ENST00000559711 TGFBR3LH3BV60 316 aa11.86□□□□□ -0.51
USP3-213ENST00000559711 TNFRSF11BO00300 401 aa11.86□□□□□ -0.51
USP3-213ENST00000559711 CASC3O15234 703 aaKnown RBP11.86□□□□□ -0.51
USP3-213ENST00000559711 HS6ST1O60243 411 aa11.86□□□□□ -0.51
USP3-213ENST00000559711 CT62P0C5K7 136 aa11.86□□□□□ -0.51
USP3-213ENST00000559711 FOLR1P15328 257 aa11.86□□□□□ -0.51
USP3-213ENST00000559711 S1PR1P21453 382 aa11.86□□□□□ -0.51
USP3-213ENST00000559711 MAP3K8P41279 467 aa11.86□□□□□ -0.51
USP3-213ENST00000559711 LIMS1P48059 325 aa11.86□□□□□ -0.51
USP3-213ENST00000559711 RAD23AP54725 363 aa11.86□□□□□ -0.51
USP3-213ENST00000559711 HSD17B7P56937 341 aa11.86□□□□□ -0.51
USP3-213ENST00000559711 MAT1AQ00266 395 aaKnown RBP11.86□□□□□ -0.51
USP3-213ENST00000559711 ZIK1Q3SY52 487 aaPredicted RBP11.86□□□□□ -0.51
USP3-213ENST00000559711 GPAT3Q53EU6 434 aa11.86□□□□□ -0.51
USP3-213ENST00000559711 SNAP47Q5SQN1 464 aa11.86□□□□□ -0.51
USP3-213ENST00000559711 OR51Q1Q8NH59 317 aa11.86□□□□□ -0.51
USP3-213ENST00000559711 FBXL20Q96IG2 436 aa11.86□□□□□ -0.51
USP3-213ENST00000559711 MBOAT4Q96T53 435 aa11.86□□□□□ -0.51
USP3-213ENST00000559711 PIGUQ9H490 435 aa11.86□□□□□ -0.51
USP3-213ENST00000559711 CXorf21Q9HAI6 301 aa11.86□□□□□ -0.51
USP3-213ENST00000559711 PRTFDC1Q9NRG1 225 aa11.86□□□□□ -0.51
USP3-213ENST00000559711 FAM118AQ9NWS6 357 aa11.86□□□□□ -0.51
USP3-213ENST00000559711 PDP1Q9P0J1 537 aaPredicted RBP11.86□□□□□ -0.51
USP3-213ENST00000559711 KCND3Q9UK17 655 aa11.86□□□□□ -0.51
USP3-213ENST00000559711 FAM32AQ9Y421 112 aaKnown RBP11.86□□□□□ -0.51
USP3-213ENST00000559711 TESMINQ9Y4I5 508 aa11.86□□□□□ -0.51
USP3-213ENST00000559711 CPED1A4D0V7 1026 aa11.85□□□□□ -0.51
USP3-213ENST00000559711 PATE3B3GLJ2 98 aa11.85□□□□□ -0.51
USP3-213ENST00000559711 ARHGAP33O14559 1287 aa11.85□□□□□ -0.51
USP3-213ENST00000559711 ZNF749O43361 778 aa11.85□□□□□ -0.51
USP3-213ENST00000559711 OR10H2O60403 315 aa11.85□□□□□ -0.51
USP3-213ENST00000559711 NME6O75414 186 aaPredicted RBP11.85□□□□□ -0.51
USP3-213ENST00000559711 JRKO75564 520 aa11.85□□□□□ -0.51
USP3-213ENST00000559711 ANKRD34CP0C6C1 535 aa11.85□□□□□ -0.51
USP3-213ENST00000559711 ACP2P11117 423 aa11.85□□□□□ -0.51
USP3-213ENST00000559711 CHRNEQ04844 493 aa11.85□□□□□ -0.51
USP3-213ENST00000559711 SLC13A2Q13183 592 aa11.85□□□□□ -0.51
USP3-213ENST00000559711 BIKQ13323 160 aa11.85□□□□□ -0.51
USP3-213ENST00000559711 LAPTM4AQ15012 233 aa11.85□□□□□ -0.51
USP3-213ENST00000559711 DUSP5Q16690 384 aa11.85□□□□□ -0.51
USP3-213ENST00000559711 SYT16Q17RD7 645 aa11.85□□□□□ -0.51
USP3-213ENST00000559711 ARHGAP11BQ3KRB8 267 aa11.85□□□□□ -0.51
USP3-213ENST00000559711 PERM1Q5SV97 790 aa11.85□□□□□ -0.51
USP3-213ENST00000559711 YOD1Q5VVQ6 348 aaPredicted RBP11.85□□□□□ -0.51
USP3-213ENST00000559711 AP1ARQ63HQ0 302 aa11.85□□□□□ -0.51
USP3-213ENST00000559711 ZNF574Q6ZN55 896 aaPredicted RBP11.85□□□□□ -0.51
USP3-213ENST00000559711 DGAT2L6Q6ZPD8 337 aa11.85□□□□□ -0.51
USP3-213ENST00000559711 OLIG3Q7RTU3 272 aa11.85□□□□□ -0.51
USP3-213ENST00000559711 C16orf62Q7Z3J2 963 aa11.85□□□□□ -0.51
USP3-213ENST00000559711 CDRT4Q8N9R6 151 aa11.85□□□□□ -0.51
USP3-213ENST00000559711 CHDHQ8NE62 594 aaPredicted RBP11.85□□□□□ -0.51
USP3-213ENST00000559711 HOXB13Q92826 284 aaPredicted RBP11.85□□□□□ -0.51
USP3-213ENST00000559711 NAT6Q93015 286 aa11.85□□□□□ -0.51
USP3-213ENST00000559711 STACQ99469 402 aa11.85□□□□□ -0.51
USP3-213ENST00000559711 ALOXE3Q9BYJ1 711 aa11.85□□□□□ -0.51
USP3-213ENST00000559711 SOX17Q9H6I2 414 aaPredicted RBP11.85□□□□□ -0.51
USP3-213ENST00000559711 ADAP2Q9NPF8 381 aa11.85□□□□□ -0.51
USP3-213ENST00000559711 DUSP22Q9NRW4 184 aa11.85□□□□□ -0.51
USP3-213ENST00000559711 ACER3Q9NUN7 267 aa11.85□□□□□ -0.51
USP3-213ENST00000559711 SERTAD3Q9UJW9 196 aa11.85□□□□□ -0.51
USP3-213ENST00000559711 ORC6Q9Y5N6 252 aa11.85□□□□□ -0.51
USP3-213ENST00000559711 TNRC6BQ9UPQ9 1833 aaKnown RBP11.85□□□□□ -0.51
USP3-213ENST00000559711 A0A1W2PQM1 296 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 A8MU76 341 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 A8MVJ9 347 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 J3KTA2 159 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 SYT5O00445 386 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 FFAR1O14842 300 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 SLC16A6O15403 523 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 SMNDC1O75940 238 aaKnown RBP eCLIP11.84□□□□□ -0.514e-9■■■□□ 17.4
USP3-213ENST00000559711 SOX30O94993 753 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 ZIC2O95409 532 aaPredicted RBP11.84□□□□□ -0.51
USP3-213ENST00000559711 CPNE6O95741 557 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 CER1O95813 267 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 CLIC3O95833 236 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 CBX7O95931 251 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 LGI1O95970 557 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 SP9P0CG40 484 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 ITGAMP11215 1152 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 IGFBP5P24593 272 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 GALNSP34059 522 aa11.84□□□□□ -0.51
USP3-213ENST00000559711 YAP1P46937 504 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms