RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 ADAMDEC1O15204 470 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 SRPX2O60687 465 aaPredicted RBP10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 NR4A2P43354 598 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 HMGN2P46Q86SG4 172 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 CRIPAKQ8N1N5 446 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 GATSQ8NAP1 163 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 RSC1A1Q92681 617 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 GAL3ST3Q96A11 431 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 GABRG3Q99928 467 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 OLAHQ9NV23 265 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 ZSCAN32Q9NX65 697 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 ERVK-18Q9QC07 812 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 PTRH2Q9Y3E5 179 aaKnown RBP10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 AP1M2Q9Y6Q5 423 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 ISPDA4D126 451 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 EMC8O43402 210 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 NME6O75414 186 aaPredicted RBP10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 GADD45GO95257 159 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 UQCRC2P22695 453 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 GSTM2P28161 218 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 NCS1P62166 190 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 ERV3-1Q14264 604 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 CLCA4Q14CN2 919 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 TAF13Q15543 124 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 SGCBQ16585 318 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 CARM1Q86X55 608 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 SNX29P2Q8IUI4 249 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 MINDY1Q8N5J2 469 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 FAM98AQ8NCA5 519 aaKnown RBP10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 GTPBP3Q969Y2 492 aaKnown RBP10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 TCTN2Q96GX1 697 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 SERINC2Q96SA4 455 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 SLC22A4Q9H015 551 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 S1PR5Q9H228 398 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 CHRDQ9H2X0 955 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 MALT1Q9UDY8 824 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 WDR81Q562E7 1941 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 PSKH1P11801 424 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 ZNF26P17031 533 aaPredicted RBP10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 ITGA3P26006 1051 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 PTGER1P34995 402 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 ATP4BP51164 291 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 PPP5CP53041 499 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 POU6F2P78424 691 aaPredicted RBP10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 KCNJ8Q15842 424 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 ZNF630Q2M218 657 aaPredicted RBP10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 TBRG1Q3YBR2 411 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 TUBA3EQ6PEY2 450 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 CLEC14AQ86T13 490 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 IQCHQ86VS3 1027 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 TMEM151BQ8IW70 566 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 C19orf47Q8N9M1 422 aaKnown RBP10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 ZSCAN1Q8NBB4 408 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 PJA1Q8NG27 643 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 GRHL3Q8TE85 626 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 TSPEARQ8WU66 669 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 EFHD2Q96C19 240 aaPredicted RBP10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 SLC25A36Q96CQ1 311 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 RDH12Q96NR8 316 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 TRNT1Q96Q11 434 aaKnown RBP10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 PELOQ9BRX2 385 aaKnown RBP10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 BRF2Q9HAW0 419 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 ZNF304Q9HCX3 659 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 C1GALT1Q9NS00 363 aa10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 DHCR7Q9UBM7 475 aaKnown RBP10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 ZFR2Q9UPR6 939 aaKnown RBP10.09□□□□□ -0.79
CARMIL3-202ENST00000559694 A6NCN8 305 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 ELOA3DA6NLF2 546 aaPredicted RBP10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 CHRNB1P11230 501 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 MYF5P13349 255 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 ELOA3BQ3SY89 546 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 OR2T5Q6IEZ7 315 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 SLCO4C1Q6ZQN7 724 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 OR8H3Q8N146 312 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 FBXL6Q8N531 539 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 ELOA3Q8NG57 546 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 OR2T29Q8NH02 315 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 KLHL6Q8WZ60 621 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 C3orf30Q96M34 536 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 OR6C1Q96RD1 312 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 PAQR5Q9NXK6 330 aaPredicted RBP10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 TDRD15B5MCY1 1934 aaKnown RBP10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 IGHV1OR15-9A0A0B4J2B8 117 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 LDB3O75112 727 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 DNAJB5O75953 348 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 NPPBP16860 134 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 HIST1H1TP22492 207 aaPredicted RBP10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 CXCR1P25024 350 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 RPS3AP61247 264 aaKnown RBP10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 HSD11B2P80365 405 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 ZNF33BQ06732 778 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 GRIK2Q13002 908 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 BTBD16Q32M84 506 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 LCN8Q6JVE9 175 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 REEP3Q6NUK4 255 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 BLOC1S3Q6QNY0 202 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 NLRP8Q86W28 1048 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 ELMOD2Q8IZ81 293 aa10.08□□□□□ -0.8
CARMIL3-202ENST00000559694 TBC1D15Q8TC07 691 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms