RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 SMIM30A4D0T7 59 aa2.52□□□□□ -2.01
VPS13C-207ENST00000558919 ZFP92A6NM28 416 aa2.52□□□□□ -2.01
VPS13C-207ENST00000558919 EEF2KO00418 725 aaKnown RBP2.52□□□□□ -2.01
VPS13C-207ENST00000558919 SLC17A2O00624 439 aa2.52□□□□□ -2.01
VPS13C-207ENST00000558919 AKAP3O75969 853 aa2.52□□□□□ -2.01
VPS13C-207ENST00000558919 WNT2P09544 360 aa2.52□□□□□ -2.01
VPS13C-207ENST00000558919 HOXB7P09629 217 aa2.52□□□□□ -2.01
VPS13C-207ENST00000558919 H2AFZP0C0S5 128 aa2.52□□□□□ -2.01
VPS13C-207ENST00000558919 HIST1H2AGP0C0S8 130 aaPredicted RBP2.52□□□□□ -2.01
VPS13C-207ENST00000558919 PTPN4P29074 926 aa2.52□□□□□ -2.01
VPS13C-207ENST00000558919 P2RY4P51582 365 aa2.52□□□□□ -2.01
VPS13C-207ENST00000558919 RIPPLY3P57055 190 aa2.52□□□□□ -2.01
VPS13C-207ENST00000558919 KIAA1024LP59773 190 aa2.52□□□□□ -2.01
VPS13C-207ENST00000558919 KRTAP10-8P60410 259 aa2.52□□□□□ -2.01
VPS13C-207ENST00000558919 SMU1Q2TAY7 513 aa2.52□□□□□ -2.01
VPS13C-207ENST00000558919 GPAT3Q53EU6 434 aa2.52□□□□□ -2.01
VPS13C-207ENST00000558919 ZNF658Q5TYW1 1059 aaPredicted RBP2.52□□□□□ -2.01
VPS13C-207ENST00000558919 NKAIN2Q5VXU1 208 aa2.52□□□□□ -2.01
VPS13C-207ENST00000558919 TMEM270Q6UE05 265 aa2.52□□□□□ -2.01
VPS13C-207ENST00000558919 ADAMTSL5Q6ZMM2 481 aa2.52□□□□□ -2.01
VPS13C-207ENST00000558919 SLC22A16Q86VW1 577 aa2.52□□□□□ -2.01
VPS13C-207ENST00000558919 TICAM2Q86XR7 235 aa2.52□□□□□ -2.01
VPS13C-207ENST00000558919 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.52□□□□□ -2.01
VPS13C-207ENST00000558919 PYROXD2Q8N2H3 581 aa2.52□□□□□ -2.01
VPS13C-207ENST00000558919 CHCHD4Q8N4Q1 142 aa2.52□□□□□ -2.01
VPS13C-207ENST00000558919 TMCO5AQ8N6Q1 288 aa2.52□□□□□ -2.01
VPS13C-207ENST00000558919 LPCAT1Q8NF37 534 aa2.52□□□□□ -2.01
VPS13C-207ENST00000558919 OR4A16Q8NH70 328 aa2.52□□□□□ -2.01
VPS13C-207ENST00000558919 ZNF564Q8TBZ8 553 aaPredicted RBP2.52□□□□□ -2.01
VPS13C-207ENST00000558919 FNDC8Q8TC99 324 aa2.52□□□□□ -2.01
VPS13C-207ENST00000558919 P3H4Q92791 437 aa2.52□□□□□ -2.01
VPS13C-207ENST00000558919 HIST1H2ACQ93077 130 aa2.52□□□□□ -2.01
VPS13C-207ENST00000558919 ACCSQ96QU6 501 aa2.52□□□□□ -2.01
VPS13C-207ENST00000558919 FAM213AQ9BRX8 229 aa2.52□□□□□ -2.01
VPS13C-207ENST00000558919 SLC5A7Q9GZV3 580 aa2.52□□□□□ -2.01
VPS13C-207ENST00000558919 MMADHCQ9H3L0 296 aaPredicted RBP2.52□□□□□ -2.01
VPS13C-207ENST00000558919 TSPY26PQ9H489 355 aa2.52□□□□□ -2.01
VPS13C-207ENST00000558919 APOBEC3BQ9UH17 382 aaKnown RBP2.52□□□□□ -2.01
VPS13C-207ENST00000558919 RPH3AQ9Y2J0 694 aaPredicted RBP2.52□□□□□ -2.01
VPS13C-207ENST00000558919 MTF2Q9Y483 593 aaPredicted RBP2.52□□□□□ -2.01
VPS13C-207ENST00000558919 IGLV8-61A0A075B6I0 122 aa2.51□□□□□ -2.01
VPS13C-207ENST00000558919 C5orf51A6NDU8 294 aa2.51□□□□□ -2.01
VPS13C-207ENST00000558919 MFSD2BA6NFX1 497 aa2.51□□□□□ -2.01
VPS13C-207ENST00000558919 PDLIM1O00151 329 aa2.51□□□□□ -2.01
VPS13C-207ENST00000558919 LCMT2O60294 686 aaKnown RBP2.51□□□□□ -2.01
VPS13C-207ENST00000558919 SERF1AO75920 110 aa2.51□□□□□ -2.01
VPS13C-207ENST00000558919 SLC2A10O95528 541 aa2.51□□□□□ -2.01
VPS13C-207ENST00000558919 OR1D4P47884 311 aa2.51□□□□□ -2.01
VPS13C-207ENST00000558919 ALDH3B2P48448 385 aa2.51□□□□□ -2.01
VPS13C-207ENST00000558919 NT5C2P49902 561 aa2.51□□□□□ -2.01
VPS13C-207ENST00000558919 HLCSP50747 726 aa2.51□□□□□ -2.01
VPS13C-207ENST00000558919 METAP1P53582 386 aa2.51□□□□□ -2.01
VPS13C-207ENST00000558919 NME5P56597 212 aa2.51□□□□□ -2.01
VPS13C-207ENST00000558919 RIPK4P57078 832 aa2.51□□□□□ -2.01
VPS13C-207ENST00000558919 HAND2P61296 217 aa2.51□□□□□ -2.01
VPS13C-207ENST00000558919 TEFQ10587 303 aa2.51□□□□□ -2.01
VPS13C-207ENST00000558919 SERTAD2Q14140 314 aa2.51□□□□□ -2.01
VPS13C-207ENST00000558919 SMC1AQ14683 1233 aaKnown RBP2.51□□□□□ -2.01
VPS13C-207ENST00000558919 MORF4L2Q15014 288 aa2.51□□□□□ -2.01
VPS13C-207ENST00000558919 RANBP3LQ86VV4 465 aaPredicted RBP2.51□□□□□ -2.01
VPS13C-207ENST00000558919 UNC5CLQ8IV45 518 aa2.51□□□□□ -2.01
VPS13C-207ENST00000558919 RNASE8Q8TDE3 154 aaKnown RBP2.51□□□□□ -2.01
VPS13C-207ENST00000558919 C5orf30Q96GV9 206 aa2.51□□□□□ -2.01
VPS13C-207ENST00000558919 C19orf24Q9BVV8 132 aa2.51□□□□□ -2.01
VPS13C-207ENST00000558919 ELOVL4Q9GZR5 314 aa2.51□□□□□ -2.01
VPS13C-207ENST00000558919 TRPV6Q9H1D0 765 aa2.51□□□□□ -2.01
VPS13C-207ENST00000558919 OPN3Q9H1Y3 402 aaPredicted RBP2.51□□□□□ -2.01
VPS13C-207ENST00000558919 C2orf40Q9H1Z8 148 aa2.51□□□□□ -2.01
VPS13C-207ENST00000558919 TNMDQ9H2S6 317 aa2.51□□□□□ -2.01
VPS13C-207ENST00000558919 PLSCR3Q9NRY6 295 aa2.51□□□□□ -2.01
VPS13C-207ENST00000558919 KLRF1Q9NZS2 232 aa2.51□□□□□ -2.01
VPS13C-207ENST00000558919 ABCG2Q9UNQ0 655 aa2.51□□□□□ -2.01
VPS13C-207ENST00000558919 ENTPD4Q9Y227 616 aa2.51□□□□□ -2.01
VPS13C-207ENST00000558919 WI2-2373I1.2A0A1W2PRP0 233 aa2.5□□□□□ -2.01
VPS13C-207ENST00000558919 RANBP6O60518 1105 aaKnown RBP2.5□□□□□ -2.01
VPS13C-207ENST00000558919 ECDO95905 644 aaPredicted RBP2.5□□□□□ -2.01
VPS13C-207ENST00000558919 GSTA1P08263 222 aa2.5□□□□□ -2.01
VPS13C-207ENST00000558919 ALPIP09923 528 aa2.5□□□□□ -2.01
VPS13C-207ENST00000558919 ZP3P21754 424 aa2.5□□□□□ -2.01
VPS13C-207ENST00000558919 IDSP22304 550 aa2.5□□□□□ -2.01
VPS13C-207ENST00000558919 NSFP46459 744 aaKnown RBP2.5□□□□□ -2.01
VPS13C-207ENST00000558919 STX17P56962 302 aa2.5□□□□□ -2.01
VPS13C-207ENST00000558919 CCZ1BP86790 482 aa2.5□□□□□ -2.01
VPS13C-207ENST00000558919 CCZ1P86791 482 aaPredicted RBP2.5□□□□□ -2.01
VPS13C-207ENST00000558919 NPRL3Q12980 569 aa2.5□□□□□ -2.01
VPS13C-207ENST00000558919 PDE7AQ13946 482 aa2.5□□□□□ -2.01
VPS13C-207ENST00000558919 ZIC1Q15915 447 aa2.5□□□□□ -2.01
VPS13C-207ENST00000558919 SLC39A12Q504Y0 691 aa2.5□□□□□ -2.01
VPS13C-207ENST00000558919 PAGE2BQ5JRK9 111 aa2.5□□□□□ -2.01
VPS13C-207ENST00000558919 ZNF544Q6NX49 715 aa2.5□□□□□ -2.01
VPS13C-207ENST00000558919 CWC27Q6UX04 472 aaKnown RBP2.5□□□□□ -2.01
VPS13C-207ENST00000558919 PRSS48Q7RTY5 328 aa2.5□□□□□ -2.01
VPS13C-207ENST00000558919 ANKRD23Q86SG2 305 aa2.5□□□□□ -2.01
VPS13C-207ENST00000558919 COLGALT1Q8NBJ5 622 aa2.5□□□□□ -2.01
VPS13C-207ENST00000558919 OR2L5Q8NG80 312 aa2.5□□□□□ -2.01
VPS13C-207ENST00000558919 CCDC26Q8TAB7 109 aa2.5□□□□□ -2.01
VPS13C-207ENST00000558919 RFESDQ8TAC1 157 aa2.5□□□□□ -2.01
VPS13C-207ENST00000558919 FRAT1Q92837 279 aaPredicted RBP2.5□□□□□ -2.01
VPS13C-207ENST00000558919 HCAR1Q9BXC0 346 aa2.5□□□□□ -2.01
VPS13C-207ENST00000558919 TMEM245Q9H330 911 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms