RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 AGR3Q8TD06 166 aa11.48□□□□□ -0.57
SMAD3-208ENST00000558827 CA5BP1Q8WTZ4 195 aa11.48□□□□□ -0.57
SMAD3-208ENST00000558827 LCORQ96JN0 433 aaPredicted RBP11.48□□□□□ -0.57
SMAD3-208ENST00000558827 EGLN2Q96KS0 407 aa11.48□□□□□ -0.57
SMAD3-208ENST00000558827 FAM111AQ96PZ2 611 aa11.48□□□□□ -0.57
SMAD3-208ENST00000558827 BBS4Q96RK4 519 aa11.48□□□□□ -0.57
SMAD3-208ENST00000558827 TP63Q9H3D4 680 aaPredicted RBP11.48□□□□□ -0.57
SMAD3-208ENST00000558827 METTL7AQ9H8H3 244 aa11.48□□□□□ -0.57
SMAD3-208ENST00000558827 SLC35C2Q9NQQ7 365 aa11.48□□□□□ -0.57
SMAD3-208ENST00000558827 CNIH4Q9P003 139 aa11.48□□□□□ -0.57
SMAD3-208ENST00000558827 GIMAP2Q9UG22 337 aa11.48□□□□□ -0.57
SMAD3-208ENST00000558827 ZNF639Q9UID6 485 aa11.48□□□□□ -0.57
SMAD3-208ENST00000558827 STK38LQ9Y2H1 464 aa11.48□□□□□ -0.57
SMAD3-208ENST00000558827 SLC6A5Q9Y345 797 aa11.48□□□□□ -0.57
SMAD3-208ENST00000558827 KLF2Q9Y5W3 355 aaPredicted RBP11.48□□□□□ -0.57
SMAD3-208ENST00000558827 EXPH5Q8NEV8 1989 aa11.47□□□□□ -0.57
SMAD3-208ENST00000558827 C15orf38-AP3S2A0A0A6YYH1 394 aa11.47□□□□□ -0.57
SMAD3-208ENST00000558827 CCDC151A5D8V7 595 aa11.47□□□□□ -0.57
SMAD3-208ENST00000558827 CAPN14A8MX76 684 aa11.47□□□□□ -0.57
SMAD3-208ENST00000558827 KDM4EB2RXH2 506 aaPredicted RBP11.47□□□□□ -0.57
SMAD3-208ENST00000558827 TMEM233B4DJY2 109 aa11.47□□□□□ -0.57
SMAD3-208ENST00000558827 AKAP10O43572 662 aa11.47□□□□□ -0.57
SMAD3-208ENST00000558827 SEC22BO75396 215 aa11.47□□□□□ -0.57
SMAD3-208ENST00000558827 REM1O75628 298 aa11.47□□□□□ -0.57
SMAD3-208ENST00000558827 IGHG3P01860 377 aa11.47□□□□□ -0.57
SMAD3-208ENST00000558827 CHRNGP07510 517 aa11.47□□□□□ -0.57
SMAD3-208ENST00000558827 LINC00032P0C843 101 aa11.47□□□□□ -0.57
SMAD3-208ENST00000558827 DRD2P14416 443 aa11.47□□□□□ -0.57
SMAD3-208ENST00000558827 TACR1P25103 407 aa11.47□□□□□ -0.57
SMAD3-208ENST00000558827 ALDH3A1P30838 453 aa11.47□□□□□ -0.57
SMAD3-208ENST00000558827 CASP3P42574 277 aa11.47□□□□□ -0.57
SMAD3-208ENST00000558827 PLCXD2Q0VAA5 305 aa11.47□□□□□ -0.57
SMAD3-208ENST00000558827 EIPR1Q53HC9 387 aa11.47□□□□□ -0.57
SMAD3-208ENST00000558827 ZNF628Q5EBL2 1059 aa11.47□□□□□ -0.57
SMAD3-208ENST00000558827 SH2D4BQ5SQS7 431 aa11.47□□□□□ -0.57
SMAD3-208ENST00000558827 LIPMQ5VYY2 423 aa11.47□□□□□ -0.57
SMAD3-208ENST00000558827 RTL6Q6ICC9 239 aa11.47□□□□□ -0.57
SMAD3-208ENST00000558827 ZCCHC23Q6ZST2 131 aa11.47□□□□□ -0.57
SMAD3-208ENST00000558827 SLC34A3Q8N130 599 aa11.47□□□□□ -0.57
SMAD3-208ENST00000558827 LIX1Q8N485 282 aa11.47□□□□□ -0.57
SMAD3-208ENST00000558827 OR7G2Q8NG99 324 aa11.47□□□□□ -0.57
SMAD3-208ENST00000558827 CLHC1Q8NHS4 586 aa11.47□□□□□ -0.57
SMAD3-208ENST00000558827 PHF10Q8WUB8 498 aaKnown RBP11.47□□□□□ -0.57
SMAD3-208ENST00000558827 RND1Q92730 232 aa11.47□□□□□ -0.57
SMAD3-208ENST00000558827 TMBIM1Q969X1 311 aa11.47□□□□□ -0.57
SMAD3-208ENST00000558827 ZNF597Q96LX8 424 aa11.47□□□□□ -0.57
SMAD3-208ENST00000558827 IQCGQ9H095 443 aaKnown RBP11.47□□□□□ -0.57
SMAD3-208ENST00000558827 ZNF703Q9H7S9 590 aaPredicted RBP11.47□□□□□ -0.57
SMAD3-208ENST00000558827 GALNT9Q9HCQ5 603 aa11.47□□□□□ -0.57
SMAD3-208ENST00000558827 GIMAP4Q9NUV9 329 aa11.47□□□□□ -0.57
SMAD3-208ENST00000558827 COQ3Q9NZJ6 369 aa11.47□□□□□ -0.57
SMAD3-208ENST00000558827 SENP1Q9P0U3 644 aa11.47□□□□□ -0.57
SMAD3-208ENST00000558827 PHF3Q92576 2039 aaKnown RBP11.47□□□□□ -0.57
SMAD3-208ENST00000558827 POLQO75417 2590 aa11.46□□□□□ -0.57
SMAD3-208ENST00000558827 MYO9AB2RTY4 2548 aa11.46□□□□□ -0.57
SMAD3-208ENST00000558827 C17orf51A8MQB3 221 aa11.46□□□□□ -0.57
SMAD3-208ENST00000558827 AQP7O14520 342 aa11.46□□□□□ -0.57
SMAD3-208ENST00000558827 AZIN1O14977 448 aa11.46□□□□□ -0.57
SMAD3-208ENST00000558827 TRIM13O60858 407 aa11.46□□□□□ -0.57
SMAD3-208ENST00000558827 UGT2B11O75310 529 aa11.46□□□□□ -0.57
SMAD3-208ENST00000558827 TRIM3O75382 744 aaPredicted RBP11.46□□□□□ -0.57
SMAD3-208ENST00000558827 PPM1BO75688 479 aa11.46□□□□□ -0.57
SMAD3-208ENST00000558827 SLU7O95391 586 aaKnown RBP11.46□□□□□ -0.57
SMAD3-208ENST00000558827 GLI4P10075 376 aa11.46□□□□□ -0.57
SMAD3-208ENST00000558827 UROSP10746 265 aa11.46□□□□□ -0.57
SMAD3-208ENST00000558827 EFNA1P20827 205 aaPredicted RBP11.46□□□□□ -0.57
SMAD3-208ENST00000558827 ACVR2AP27037 513 aa11.46□□□□□ -0.57
SMAD3-208ENST00000558827 NCBP2P52298 156 aaKnown RBP eCLIP11.46□□□□□ -0.57
SMAD3-208ENST00000558827 HEPACAMQ14CZ8 416 aa11.46□□□□□ -0.57
SMAD3-208ENST00000558827 HYAL4Q2M3T9 481 aa11.46□□□□□ -0.57
SMAD3-208ENST00000558827 ERCC6LQ2NKX8 1250 aa11.46□□□□□ -0.57
SMAD3-208ENST00000558827 WIPI1Q5MNZ9 446 aaPredicted RBP11.46□□□□□ -0.57
SMAD3-208ENST00000558827 WLSQ5T9L3 541 aa11.46□□□□□ -0.57
SMAD3-208ENST00000558827 FNDC7Q5VTL7 733 aa11.46□□□□□ -0.57
SMAD3-208ENST00000558827 TMEM211Q6ICI0 200 aa11.46□□□□□ -0.57
SMAD3-208ENST00000558827 FAM71E1Q6IPT2 247 aa11.46□□□□□ -0.57
SMAD3-208ENST00000558827 NOXRED1Q6NXP6 359 aa11.46□□□□□ -0.57
SMAD3-208ENST00000558827 ANGPTL8Q6UXH0 198 aa11.46□□□□□ -0.57
SMAD3-208ENST00000558827 YRDCQ86U90 279 aaKnown RBP11.46□□□□□ -0.57
SMAD3-208ENST00000558827 TRABD2AQ86V40 505 aa11.46□□□□□ -0.57
SMAD3-208ENST00000558827 BANPQ8N9N5 519 aa11.46□□□□□ -0.57
SMAD3-208ENST00000558827 OR4N2Q8NGD1 307 aa11.46□□□□□ -0.57
SMAD3-208ENST00000558827 OR2T11Q8NH01 316 aa11.46□□□□□ -0.57
SMAD3-208ENST00000558827 AENQ8WTP8 325 aaKnown RBP11.46□□□□□ -0.57
SMAD3-208ENST00000558827 HGDQ93099 445 aa11.46□□□□□ -0.57
SMAD3-208ENST00000558827 CTHRC1Q96CG8 243 aa11.46□□□□□ -0.57
SMAD3-208ENST00000558827 APOPT1Q96IL0 206 aa11.46□□□□□ -0.57
SMAD3-208ENST00000558827 ANGPTL4Q9BY76 406 aa11.46□□□□□ -0.57
SMAD3-208ENST00000558827 TUBB1Q9H4B7 451 aa11.46□□□□□ -0.57
SMAD3-208ENST00000558827 FOLH1BQ9HBA9 442 aa11.46□□□□□ -0.57
SMAD3-208ENST00000558827 CHST11Q9NPF2 352 aa11.46□□□□□ -0.57
SMAD3-208ENST00000558827 MIEF1Q9NQG6 463 aa11.46□□□□□ -0.57
SMAD3-208ENST00000558827 RRAGDQ9NQL2 400 aaPredicted RBP11.46□□□□□ -0.57
SMAD3-208ENST00000558827 BAIAP2L1Q9UHR4 511 aa11.46□□□□□ -0.57
SMAD3-208ENST00000558827 MAPRE3Q9UPY8 281 aa11.46□□□□□ -0.57
SMAD3-208ENST00000558827 EXO1Q9UQ84 846 aaKnown RBP11.46□□□□□ -0.57
SMAD3-208ENST00000558827 FAM215AQ9Y5M1 114 aa11.46□□□□□ -0.57
SMAD3-208ENST00000558827 APCP25054 2843 aa11.46□□□□□ -0.58
SMAD3-208ENST00000558827 A0A1B0GVC2 190 aa11.45□□□□□ -0.58
SMAD3-208ENST00000558827 WDR91A4D1P6 747 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms