RNA–Protein interactions for RNA: ENST00000558602.5

IDH3A-208, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, human

TSL 2

Gene IDH3A, Length 2,217 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IDH3A-208	ENST00000558602		Q9H521	79 aa		4.59	□□□□□ -1.67
IDH3A-208	ENST00000558602	A4GALT	Q9NPC4	353 aa		4.59	□□□□□ -1.67
IDH3A-208	ENST00000558602	ADPRHL2	Q9NX46	363 aa		4.59	□□□□□ -1.67
IDH3A-208	ENST00000558602	LYAR	Q9NX58	379 aa	Known RBP	4.59	□□□□□ -1.67
IDH3A-208	ENST00000558602	TMEM9	Q9P0T7	183 aa		4.59	□□□□□ -1.67
IDH3A-208	ENST00000558602	PDP2	Q9P2J9	529 aa		4.59	□□□□□ -1.67
IDH3A-208	ENST00000558602	LRIT1	Q9P2V4	623 aa		4.59	□□□□□ -1.67
IDH3A-208	ENST00000558602	TRPC4	Q9UBN4	977 aa		4.59	□□□□□ -1.67
IDH3A-208	ENST00000558602	PADI2	Q9Y2J8	665 aa		4.59	□□□□□ -1.67
IDH3A-208	ENST00000558602	SH3GLB1	Q9Y371	365 aa		4.59	□□□□□ -1.67
IDH3A-208	ENST00000558602	MSRB2	Q9Y3D2	182 aa		4.59	□□□□□ -1.67
IDH3A-208	ENST00000558602	ZNF451	Q9Y4E5	1061 aa		4.59	□□□□□ -1.67
IDH3A-208	ENST00000558602	TMEM184B	Q9Y519	407 aa	Predicted RBP	4.59	□□□□□ -1.67
IDH3A-208	ENST00000558602	RNF215	Q9Y6U7	377 aa		4.59	□□□□□ -1.67
IDH3A-208	ENST00000558602	CFAP54	Q96N23	3096 aa		4.59	□□□□□ -1.68
IDH3A-208	ENST00000558602		A0A0A6YYC8	382 aa	Predicted RBP	4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	URAD	A6NGE7	173 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602		H3BNH8	94 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	TGFBR3L	H3BV60	316 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602		I3L1I5	382 aa	Predicted RBP	4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	FFAR1	O14842	300 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	B3GALT2	O43825	422 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	HS6ST1	O60243	411 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	RDH16	O75452	317 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	ZIC2	O95409	532 aa	Predicted RBP	4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	CHRM4	P08173	479 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	THRB	P10828	461 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	RRM2	P31350	389 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	MPI	P34949	423 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	CAPG	P40121	348 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	BUD31	P41223	144 aa	Predicted RBP	4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	CTSK	P43235	329 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	DHPS	P49366	369 aa	Predicted RBP	4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	CLCN2	P51788	898 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	AFF3	P51826	1226 aa	Known RBP	4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	CDH15	P55291	814 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	ITGA1	P56199	1179 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	OR1D5	P58170	312 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	KCNAB2	Q13303	367 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	SIM2	Q14190	667 aa	Predicted RBP	4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	KCNAB1	Q14722	419 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	SYT16	Q17RD7	645 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	PRTG	Q2VWP7	1150 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	C4orf48	Q5BLP8	95 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	ARMC6	Q6NXE6	501 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	SHQ1	Q6PI26	577 aa	Known RBP	4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	TMEM64	Q6YI46	380 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	USP53	Q70EK8	1073 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	SPATC1	Q76KD6	591 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	ABHD13	Q7L211	337 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	GALNT5	Q7Z7M9	940 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	TSPYL5	Q86VY4	417 aa	Predicted RBP	4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	GATAD2A	Q86YP4	633 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	LACC1	Q8IV20	430 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	SVOPL	Q8N434	492 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	METTL25	Q8N6Q8	603 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	SLC16A11	Q8NCK7	471 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	NUP43	Q8NFH3	380 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	OR4K14	Q8NGD5	310 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	ZFP28	Q8NHY6	868 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	NCSTN	Q92542	709 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	ANKRD9	Q96BM1	317 aa	Predicted RBP	4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	SLC35A4	Q96G79	324 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	OR7D2	Q96RA2	312 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	ZNF300	Q96RE9	604 aa	Predicted RBP	4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	SMAD5	Q99717	465 aa	Known RBP	4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	TREX2	Q9BQ50	279 aa	Predicted RBP	4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	QRSL1	Q9H0R6	528 aa	Known RBP	4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	RAD21L1	Q9H4I0	556 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	ZNF696	Q9H7X3	374 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	UCK1	Q9HA47	277 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	EQTN	Q9NQ60	294 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	EXD2	Q9NVH0	621 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	FAM118A	Q9NWS6	357 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	USE1	Q9NZ43	259 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	AASS	Q9UDR5	926 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	KLHL3	Q9UH77	587 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	ENTPD4	Q9Y227	616 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	TESMIN	Q9Y4I5	508 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	LYVE1	Q9Y5Y7	322 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	ADAMTS20	P59510	1910 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	ASCC3	Q8N3C0	2202 aa	Known RBP	4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	IGHV1OR21-1	A0A087WYE8	117 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	MED19	A0JLT2	244 aa	Predicted RBP	4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602		H3BMH7	237 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	PCDH17	O14917	1159 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	EMC8	O43402	210 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	CHST10	O43529	356 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	HYAL3	O43820	417 aa	Predicted RBP	4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	SLC28A2	O43868	658 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	OR6B1	O95007	311 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	ALB	P02768	609 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	CT62	P0C5K7	136 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	CCNYL3	P0C7X3	344 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	CPM	P14384	443 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	ATP6V1B1	P15313	513 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	FPR1	P21462	350 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	ELK4	P28324	431 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	CSF2RB	P32927	897 aa		4.58	□□□□□ -1.68
IDH3A-208	ENST00000558602	XCR1	P46094	333 aa		4.58	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms