RNA–Protein interactions for RNA: ENST00000558562.1

TMED3-205, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 938 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-205ENST00000558562 NCF4Q15080 339 aa12.62□□□□□ -0.39
TMED3-205ENST00000558562 NDUFAF5Q5TEU4 345 aa12.62□□□□□ -0.39
TMED3-205ENST00000558562 ABHD13Q7L211 337 aa12.62□□□□□ -0.39
TMED3-205ENST00000558562 ADGRG5Q8IZF4 528 aa12.62□□□□□ -0.39
TMED3-205ENST00000558562 ST6GALNAC3Q8NDV1 305 aa12.62□□□□□ -0.39
TMED3-205ENST00000558562 OR1L3Q8NH93 324 aa12.62□□□□□ -0.39
TMED3-205ENST00000558562 PNPT1Q8TCS8 783 aaKnown RBP12.62□□□□□ -0.39
TMED3-205ENST00000558562 ZFP90Q8TF47 636 aa12.62□□□□□ -0.39
TMED3-205ENST00000558562 CANT1Q8WVQ1 401 aa12.62□□□□□ -0.39
TMED3-205ENST00000558562 OR5P2Q8WZ92 322 aa12.62□□□□□ -0.39
TMED3-205ENST00000558562 FIG4Q92562 907 aa12.62□□□□□ -0.39
TMED3-205ENST00000558562 NCLNQ969V3 563 aa12.62□□□□□ -0.39
TMED3-205ENST00000558562 FAM162AQ96A26 154 aa12.62□□□□□ -0.39
TMED3-205ENST00000558562 REXO5Q96IC2 774 aaKnown RBP12.62□□□□□ -0.39
TMED3-205ENST00000558562 TRAPPC9Q96Q05 1148 aa12.62□□□□□ -0.39
TMED3-205ENST00000558562 SPATA9Q9BWV2 254 aa12.62□□□□□ -0.39
TMED3-205ENST00000558562 VCX3BQ9H321 246 aa12.62□□□□□ -0.39
TMED3-205ENST00000558562 TPT1P8Q9HAU6 139 aa12.62□□□□□ -0.39
TMED3-205ENST00000558562 TAS2R9Q9NYW1 312 aa12.62□□□□□ -0.39
TMED3-205ENST00000558562 EHD3Q9NZN3 535 aa12.62□□□□□ -0.39
TMED3-205ENST00000558562 ASB4Q9Y574 426 aa12.62□□□□□ -0.39
TMED3-205ENST00000558562 PCDHGA10Q9Y5H3 936 aa12.62□□□□□ -0.39
TMED3-205ENST00000558562 CSAG2Q9Y5P2 127 aa12.62□□□□□ -0.39
TMED3-205ENST00000558562 GMEB1Q9Y692 573 aa12.62□□□□□ -0.39
TMED3-205ENST00000558562 NF1P21359 2839 aa12.62□□□□□ -0.39
TMED3-205ENST00000558562 TACC2O95359 2948 aa12.61□□□□□ -0.39
TMED3-205ENST00000558562 CCDC88CQ9P219 2028 aa12.61□□□□□ -0.39
TMED3-205ENST00000558562 AKAP9Q99996 3911 aa12.61□□□□□ -0.39
TMED3-205ENST00000558562 LOC105369274A0A096LPK9 316 aa12.61□□□□□ -0.39
TMED3-205ENST00000558562 LOC102723532A0A0G2JNH3 316 aa12.61□□□□□ -0.39
TMED3-205ENST00000558562 SLC9B1P1A6NJY1 282 aa12.61□□□□□ -0.39
TMED3-205ENST00000558562 TMEM150CB9EJG8 249 aa12.61□□□□□ -0.39
TMED3-205ENST00000558562 CASQ2O14958 399 aaPredicted RBP12.61□□□□□ -0.39
TMED3-205ENST00000558562 AIFM1O95831 613 aa12.61□□□□□ -0.39
TMED3-205ENST00000558562 ALPPP05187 535 aa12.61□□□□□ -0.39
TMED3-205ENST00000558562 EIF2S1P05198 315 aaKnown RBP12.61□□□□□ -0.39
TMED3-205ENST00000558562 SMIM10L1P0DMW3 83 aa12.61□□□□□ -0.39
TMED3-205ENST00000558562 UMPSP11172 480 aa12.61□□□□□ -0.39
TMED3-205ENST00000558562 GPX2P18283 190 aa12.61□□□□□ -0.39
TMED3-205ENST00000558562 ZNF10P21506 573 aaPredicted RBP12.61□□□□□ -0.39
TMED3-205ENST00000558562 IL10P22301 178 aa12.61□□□□□ -0.39
TMED3-205ENST00000558562 NTSP30990 170 aa12.61□□□□□ -0.39
TMED3-205ENST00000558562 CHI3L1P36222 383 aaPredicted RBP12.61□□□□□ -0.39
TMED3-205ENST00000558562 PER3P56645 1201 aa12.61□□□□□ -0.39
TMED3-205ENST00000558562 MYBPC3Q14896 1274 aa12.61□□□□□ -0.39
TMED3-205ENST00000558562 TRIP10Q15642 601 aa12.61□□□□□ -0.39
TMED3-205ENST00000558562 TBCELQ5QJ74 424 aa12.61□□□□□ -0.39
TMED3-205ENST00000558562 ERICH5Q6P6B1 374 aa12.61□□□□□ -0.39
TMED3-205ENST00000558562 IGFL3Q6UXB1 125 aa12.61□□□□□ -0.39
TMED3-205ENST00000558562 MRGPREQ86SM8 312 aa12.61□□□□□ -0.39
TMED3-205ENST00000558562 SERPINA11Q86U17 422 aa12.61□□□□□ -0.39
TMED3-205ENST00000558562 RAB43Q86YS6 212 aa12.61□□□□□ -0.39
TMED3-205ENST00000558562 OR4N4Q8N0Y3 316 aa12.61□□□□□ -0.39
TMED3-205ENST00000558562 C10orf111Q8N326 155 aa12.61□□□□□ -0.39
TMED3-205ENST00000558562 GALNT16Q8N428 558 aa12.61□□□□□ -0.39
TMED3-205ENST00000558562 ZADH2Q8N4Q0 377 aa12.61□□□□□ -0.39
TMED3-205ENST00000558562 CSNK1A1LQ8N752 337 aa12.61□□□□□ -0.39
TMED3-205ENST00000558562 SLCO4A1Q96BD0 722 aa12.61□□□□□ -0.39
TMED3-205ENST00000558562 SMIM10Q96HG1 83 aa12.61□□□□□ -0.39
TMED3-205ENST00000558562 SERINC2Q96SA4 455 aa12.61□□□□□ -0.39
TMED3-205ENST00000558562 PKP2Q99959 881 aa12.61□□□□□ -0.39
TMED3-205ENST00000558562 SLC35A5Q9BS91 424 aa12.61□□□□□ -0.39
TMED3-205ENST00000558562 RAD21L1Q9H4I0 556 aa12.61□□□□□ -0.39
TMED3-205ENST00000558562 ZNF552Q9H707 407 aaPredicted RBP12.61□□□□□ -0.39
TMED3-205ENST00000558562 RPF2Q9H7B2 306 aaKnown RBP12.61□□□□□ -0.39
TMED3-205ENST00000558562 FANCEQ9HB96 536 aa12.61□□□□□ -0.39
TMED3-205ENST00000558562 AGPAT4Q9NRZ5 378 aa12.61□□□□□ -0.39
TMED3-205ENST00000558562 C1GALT1Q9NS00 363 aa12.61□□□□□ -0.39
TMED3-205ENST00000558562 CCM2LQ9NUG4 571 aaPredicted RBP12.61□□□□□ -0.39
TMED3-205ENST00000558562 PHF11Q9UIL8 331 aa12.61□□□□□ -0.39
TMED3-205ENST00000558562 RIMS3Q9UJD0 308 aa12.61□□□□□ -0.39
TMED3-205ENST00000558562 AURKCQ9UQB9 309 aa12.61□□□□□ -0.39
TMED3-205ENST00000558562 ERVK-11Q9UQG0 969 aa12.61□□□□□ -0.39
TMED3-205ENST00000558562 ZGRF1Q86YA3 2104 aa12.61□□□□□ -0.39
TMED3-205ENST00000558562 RNF103-CHMP3A0A140T963 221 aa12.6□□□□□ -0.39
TMED3-205ENST00000558562 A0A1W2PR48 441 aa12.6□□□□□ -0.39
TMED3-205ENST00000558562 ZSCAN9O15535 394 aaPredicted RBP12.6□□□□□ -0.39
TMED3-205ENST00000558562 B3GALT2O43825 422 aa12.6□□□□□ -0.39
TMED3-205ENST00000558562 PRKRAO75569 313 aaKnown RBP12.6□□□□□ -0.39
TMED3-205ENST00000558562 C1QCP02747 245 aa12.6□□□□□ -0.39
TMED3-205ENST00000558562 NR2F6P10588 404 aa12.6□□□□□ -0.39
TMED3-205ENST00000558562 IL1RNP18510 177 aa12.6□□□□□ -0.39
TMED3-205ENST00000558562 UQCRC2P22695 453 aa12.6□□□□□ -0.39
TMED3-205ENST00000558562 FRKP42685 505 aaPredicted RBP12.6□□□□□ -0.39
TMED3-205ENST00000558562 MANFP55145 182 aaKnown RBP12.6□□□□□ -0.39
TMED3-205ENST00000558562 FOXL2P58012 376 aa12.6□□□□□ -0.39
TMED3-205ENST00000558562 VSX2P58304 361 aaPredicted RBP12.6□□□□□ -0.39
TMED3-205ENST00000558562 DEFB110Q30KQ9 67 aa12.6□□□□□ -0.39
TMED3-205ENST00000558562 ZC3H12BQ5HYM0 836 aaKnown RBP12.6□□□□□ -0.39
TMED3-205ENST00000558562 DCAF10Q5QP82 559 aa12.6□□□□□ -0.39
TMED3-205ENST00000558562 ANGPTL8Q6UXH0 198 aa12.6□□□□□ -0.39
TMED3-205ENST00000558562 Q6ZS92 163 aa12.6□□□□□ -0.39
TMED3-205ENST00000558562 ZNF551Q7Z340 670 aaPredicted RBP12.6□□□□□ -0.39
TMED3-205ENST00000558562 ZZZ3Q8IYH5 903 aa12.6□□□□□ -0.39
TMED3-205ENST00000558562 LILRA2Q8N149 483 aa12.6□□□□□ -0.39
TMED3-205ENST00000558562 CLEC4FQ8N1N0 589 aa12.6□□□□□ -0.39
TMED3-205ENST00000558562 CLEC1AQ8NC01 280 aa12.6□□□□□ -0.39
TMED3-205ENST00000558562 OR52N2Q8NGI0 321 aa12.6□□□□□ -0.39
TMED3-205ENST00000558562 ZFP28Q8NHY6 868 aa12.6□□□□□ -0.39
TMED3-205ENST00000558562 UCN3Q969E3 161 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms