RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 TRMT12Q53H54 448 aaKnown RBP7.82□□□□□ -1.16
TPM1-213ENST00000558400 ZNF628Q5EBL2 1059 aa7.82□□□□□ -1.16
TPM1-213ENST00000558400 AGBL2Q5U5Z8 902 aa7.82□□□□□ -1.16
TPM1-213ENST00000558400 TMEM198Q66K66 360 aa7.82□□□□□ -1.16
TPM1-213ENST00000558400 ATG16L1Q676U5 607 aa7.82□□□□□ -1.16
TPM1-213ENST00000558400 FAM47EQ6ZV65 393 aa7.82□□□□□ -1.16
TPM1-213ENST00000558400 HDXQ7Z353 690 aa7.82□□□□□ -1.16
TPM1-213ENST00000558400 NUP54Q7Z3B4 507 aa7.82□□□□□ -1.16
TPM1-213ENST00000558400 SPPL2CQ8IUH8 684 aa7.82□□□□□ -1.16
TPM1-213ENST00000558400 LRRC34Q8IZ02 419 aa7.82□□□□□ -1.16
TPM1-213ENST00000558400 MMP21Q8N119 569 aa7.82□□□□□ -1.16
TPM1-213ENST00000558400 CPSF7Q8N684 471 aaKnown RBP7.82□□□□□ -1.16
TPM1-213ENST00000558400 ZNF441Q8N8Z8 693 aa7.82□□□□□ -1.16
TPM1-213ENST00000558400 ADCY4Q8NFM4 1077 aa7.82□□□□□ -1.16
TPM1-213ENST00000558400 OR2M7Q8NG81 312 aa7.82□□□□□ -1.16
TPM1-213ENST00000558400 OR2T11Q8NH01 316 aa7.82□□□□□ -1.16
TPM1-213ENST00000558400 ZFP28Q8NHY6 868 aa7.82□□□□□ -1.16
TPM1-213ENST00000558400 CDC26Q8NHZ8 85 aa7.82□□□□□ -1.16
TPM1-213ENST00000558400 RAB3IL1Q8TBN0 382 aa7.82□□□□□ -1.16
TPM1-213ENST00000558400 DOK4Q8TEW6 326 aa7.82□□□□□ -1.16
TPM1-213ENST00000558400 SSC4DQ8WTU2 575 aa7.82□□□□□ -1.16
TPM1-213ENST00000558400 RELTQ969Z4 430 aa7.82□□□□□ -1.16
TPM1-213ENST00000558400 PPCDCQ96CD2 204 aa7.82□□□□□ -1.16
TPM1-213ENST00000558400 TUBGCP3Q96CW5 907 aa7.82□□□□□ -1.16
TPM1-213ENST00000558400 ZBED6CLQ96FA7 236 aaPredicted RBP7.82□□□□□ -1.16
TPM1-213ENST00000558400 IL1RL2Q9HB29 575 aa7.82□□□□□ -1.16
TPM1-213ENST00000558400 SH2D2AQ9NP31 389 aa7.82□□□□□ -1.16
TPM1-213ENST00000558400 ACSS1Q9NUB1 689 aaPredicted RBP7.82□□□□□ -1.16
TPM1-213ENST00000558400 THAP1Q9NVV9 213 aa7.82□□□□□ -1.16
TPM1-213ENST00000558400 SH3BP4Q9P0V3 963 aa7.82□□□□□ -1.16
TPM1-213ENST00000558400 PLEKHB1Q9UF11 243 aaPredicted RBP7.82□□□□□ -1.16
TPM1-213ENST00000558400 NPIPA1Q9UND3 350 aa7.82□□□□□ -1.16
TPM1-213ENST00000558400 OSGIN2Q9Y236 505 aa7.82□□□□□ -1.16
TPM1-213ENST00000558400 EIF3LQ9Y262 564 aaKnown RBP7.82□□□□□ -1.16
TPM1-213ENST00000558400 GPR55Q9Y2T6 319 aaPredicted RBP7.82□□□□□ -1.16
TPM1-213ENST00000558400 SHANK1Q9Y566 2161 aa7.82□□□□□ -1.16
TPM1-213ENST00000558400 CPAMD8Q8IZJ3 1885 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 WIPF3A6NGB9 483 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 FRG2CA6NGY1 282 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 TMEM233B4DJY2 109 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 SLCO1B7G3V0H7 640 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 ZNF354AO60765 605 aaPredicted RBP7.81□□□□□ -1.16
TPM1-213ENST00000558400 PEX11AO75192 247 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 CBX7O95931 251 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 BCKDHAP12694 445 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 SDC1P18827 310 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 POU3F2P20265 443 aaPredicted RBP7.81□□□□□ -1.16
TPM1-213ENST00000558400 PRPS1L1P21108 318 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 GPX3P22352 226 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 TACR1P25103 407 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 KRT20P35900 424 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 EMDP50402 254 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 MANFP55145 182 aaKnown RBP7.81□□□□□ -1.16
TPM1-213ENST00000558400 GPR85P60893 370 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 PPIAP62937 165 aaKnown RBP7.81□□□□□ -1.16
TPM1-213ENST00000558400 RPL38P63173 70 aaKnown RBP7.81□□□□□ -1.16
TPM1-213ENST00000558400 KCNJ2P63252 427 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 MRPS22P82650 360 aaKnown RBP7.81□□□□□ -1.16
TPM1-213ENST00000558400 PMP22Q01453 160 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 EMX2Q04743 252 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 SNTA1Q13424 505 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 SLC10A1Q14973 349 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 RPS6KA2Q15349 733 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 XKR7Q5GH72 579 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 C6orf136Q5SQH8 315 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 FAM180BQ6P0A1 224 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 ARHGAP11AQ6P4F7 1023 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 TMEM81Q6P7N7 255 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 LYPD8Q6UX82 237 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 PACS2Q86VP3 889 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 SIAH3Q8IW03 269 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 FBXW8Q8N3Y1 598 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 GOLGA6L1Q8N7Z2 621 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 FNDC5Q8NAU1 212 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 FAM13CQ8NE31 585 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 OR52R1Q8NGF1 315 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 OR9A2Q8NGT5 310 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 CEP70Q8NHQ1 597 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 AGR3Q8TD06 166 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 DIO2Q92813 273 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 TLCD1Q96CP7 247 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 TMCO6Q96DC7 493 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 ELP4Q96EB1 424 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 DTNBP1Q96EV8 351 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 MAGED4Q96JG8 741 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 EGLN2Q96KS0 407 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 AMDHD1Q96NU7 426 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 TSSK3Q96PN8 268 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 NXF5Q9H1B4 397 aaKnown RBP7.81□□□□□ -1.16
TPM1-213ENST00000558400 VIPAS39Q9H9C1 493 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 C3orf14Q9HBI5 128 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 ATAD3AQ9NVI7 634 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 QPCTLQ9NXS2 382 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 BAIAP2L1Q9UHR4 511 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 HAO1Q9UJM8 370 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 MRTO4Q9UKD2 239 aaKnown RBP7.81□□□□□ -1.16
TPM1-213ENST00000558400 BOKQ9UMX3 212 aaPredicted RBP7.81□□□□□ -1.16
TPM1-213ENST00000558400 C19orf53Q9UNZ5 99 aaPredicted RBP7.81□□□□□ -1.16
TPM1-213ENST00000558400 ZNF835Q9Y2P0 537 aa7.81□□□□□ -1.16
TPM1-213ENST00000558400 PTGDR2Q9Y5Y4 395 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms