RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 NME6O75414 186 aaPredicted RBP23.62■■□□□ 1.37
SMAD6-202ENST00000557916 OR6B1O95007 311 aa23.62■■□□□ 1.37
SMAD6-202ENST00000557916 GYS2P54840 703 aa23.62■■□□□ 1.37
SMAD6-202ENST00000557916 STX1BP61266 288 aa23.62■■□□□ 1.37
SMAD6-202ENST00000557916 PHC1P78364 1004 aa23.62■■□□□ 1.37
SMAD6-202ENST00000557916 ANXA8L1Q5VT79 327 aa23.62■■□□□ 1.37
SMAD6-202ENST00000557916 TAGAPQ8N103 731 aa23.62■■□□□ 1.37
SMAD6-202ENST00000557916 ZNF843Q8N446 348 aa23.62■■□□□ 1.37
SMAD6-202ENST00000557916 SLC15A4Q8N697 577 aa23.62■■□□□ 1.37
SMAD6-202ENST00000557916 HORMAD2Q8N7B1 307 aa23.62■■□□□ 1.37
SMAD6-202ENST00000557916 TMEM120AQ9BXJ8 343 aa23.62■■□□□ 1.37
SMAD6-202ENST00000557916 LUZP4Q9P127 313 aa23.62■■□□□ 1.37
SMAD6-202ENST00000557916 A8MVJ9 347 aa23.61■■□□□ 1.37
SMAD6-202ENST00000557916 RNASET2O00584 256 aaKnown RBP23.61■■□□□ 1.37
SMAD6-202ENST00000557916 C1QL1O75973 258 aa23.61■■□□□ 1.37
SMAD6-202ENST00000557916 NADKO95544 446 aaPredicted RBP23.61■■□□□ 1.37
SMAD6-202ENST00000557916 PPICP45877 212 aa23.61■■□□□ 1.37
SMAD6-202ENST00000557916 DGKQP52824 942 aa23.61■■□□□ 1.37
SMAD6-202ENST00000557916 DCAF7P61962 342 aa23.61■■□□□ 1.37
SMAD6-202ENST00000557916 PAOXQ6QHF9 649 aa23.61■■□□□ 1.37
SMAD6-202ENST00000557916 OPN5Q6U736 354 aa23.61■■□□□ 1.37
SMAD6-202ENST00000557916 IL20RBQ6UXL0 311 aa23.61■■□□□ 1.37
SMAD6-202ENST00000557916 GPALPP1Q8IXQ4 340 aa23.61■■□□□ 1.37
SMAD6-202ENST00000557916 MDS2Q8NDY4 140 aa23.61■■□□□ 1.37
SMAD6-202ENST00000557916 VPS37AQ8NEZ2 397 aa23.61■■□□□ 1.37
SMAD6-202ENST00000557916 VSTM2LQ96N03 204 aa23.61■■□□□ 1.37
SMAD6-202ENST00000557916 NXF5Q9H1B4 397 aaKnown RBP23.61■■□□□ 1.37
SMAD6-202ENST00000557916 FOLH1BQ9HBA9 442 aa23.61■■□□□ 1.37
SMAD6-202ENST00000557916 C3orf14Q9HBI5 128 aa23.61■■□□□ 1.37
SMAD6-202ENST00000557916 SIRT3Q9NTG7 399 aaPredicted RBP23.61■■□□□ 1.37
SMAD6-202ENST00000557916 HPF1Q9NWY4 346 aa23.61■■□□□ 1.37
SMAD6-202ENST00000557916 ERVK-11Q9UQG0 969 aa23.61■■□□□ 1.37
SMAD6-202ENST00000557916 PRSS51A0A1B0GVH4 220 aa23.6■■□□□ 1.37
SMAD6-202ENST00000557916 EMC8O43402 210 aa23.6■■□□□ 1.37
SMAD6-202ENST00000557916 SCN2BO60939 215 aa23.6■■□□□ 1.37
SMAD6-202ENST00000557916 NEURL1O76050 574 aa23.6■■□□□ 1.37
SMAD6-202ENST00000557916 PSMG1O95456 288 aa23.6■■□□□ 1.37
SMAD6-202ENST00000557916 ABCB1P08183 1280 aaPredicted RBP23.6■■□□□ 1.37
SMAD6-202ENST00000557916 MRPL19P49406 292 aaKnown RBP23.6■■□□□ 1.37
SMAD6-202ENST00000557916 SF3A3Q12874 501 aaKnown RBP eCLIP23.6■■□□□ 1.37
SMAD6-202ENST00000557916 SZRD1Q7Z422 152 aa23.6■■□□□ 1.37
SMAD6-202ENST00000557916 CLECL1Q8IZS7 167 aa23.6■■□□□ 1.37
SMAD6-202ENST00000557916 CYP4Z2PQ8N1L4 340 aa23.6■■□□□ 1.37
SMAD6-202ENST00000557916 PSMA8Q8TAA3 256 aa23.6■■□□□ 1.37
SMAD6-202ENST00000557916 CHMP6Q96FZ7 201 aa23.6■■□□□ 1.37
SMAD6-202ENST00000557916 LCORQ96JN0 433 aaPredicted RBP23.6■■□□□ 1.37
SMAD6-202ENST00000557916 NEUROD4Q9HD90 331 aa23.6■■□□□ 1.37
SMAD6-202ENST00000557916 NTMQ9P121 344 aa23.6■■□□□ 1.37
SMAD6-202ENST00000557916 GPR55Q9Y2T6 319 aaPredicted RBP23.6■■□□□ 1.37
SMAD6-202ENST00000557916 SNX8Q9Y5X2 465 aa23.6■■□□□ 1.37
SMAD6-202ENST00000557916 COPG1Q9Y678 874 aaKnown RBP23.6■■□□□ 1.37
SMAD6-202ENST00000557916 CFAP46Q8IYW2 2715 aa23.59■■□□□ 1.37
SMAD6-202ENST00000557916 ERN1O75460 977 aaKnown RBP23.59■■□□□ 1.37
SMAD6-202ENST00000557916 PGRP06401 933 aa23.59■■□□□ 1.37
SMAD6-202ENST00000557916 CD46P15529 392 aa23.59■■□□□ 1.37
SMAD6-202ENST00000557916 DRD5P21918 477 aa23.59■■□□□ 1.37
SMAD6-202ENST00000557916 ARFIP2P53365 341 aa23.59■■□□□ 1.37
SMAD6-202ENST00000557916 PRKAG1P54619 331 aa23.59■■□□□ 1.37
SMAD6-202ENST00000557916 NRG3P56975 720 aa23.59■■□□□ 1.37
SMAD6-202ENST00000557916 HBA1P69905 142 aa23.59■■□□□ 1.37
SMAD6-202ENST00000557916 ZNF155Q12901 538 aaPredicted RBP23.59■■□□□ 1.37
SMAD6-202ENST00000557916 NNATQ16517 81 aa23.59■■□□□ 1.37
SMAD6-202ENST00000557916 ZNF766Q5HY98 468 aa23.59■■□□□ 1.37
SMAD6-202ENST00000557916 ANKRD46Q86W74 232 aa23.59■■□□□ 1.37
SMAD6-202ENST00000557916 ZNF227Q86WZ6 799 aa23.59■■□□□ 1.37
SMAD6-202ENST00000557916 Q8NA96 180 aa23.59■■□□□ 1.37
SMAD6-202ENST00000557916 NUP43Q8NFH3 380 aa23.59■■□□□ 1.37
SMAD6-202ENST00000557916 OR9I1Q8NGQ6 314 aa23.59■■□□□ 1.37
SMAD6-202ENST00000557916 FAM120BQ96EK7 910 aaKnown RBP23.59■■□□□ 1.37
SMAD6-202ENST00000557916 CXorf36Q9H7Y0 433 aa23.59■■□□□ 1.37
SMAD6-202ENST00000557916 RYDENQ9NUL5 291 aaKnown RBP23.59■■□□□ 1.37
SMAD6-202ENST00000557916 FAM120CQ9NX05 1096 aaKnown RBP23.59■■□□□ 1.37
SMAD6-202ENST00000557916 PCDHGB4Q9UN71 923 aa23.59■■□□□ 1.37
SMAD6-202ENST00000557916 TRIM33Q9UPN9 1127 aa23.59■■□□□ 1.37
SMAD6-202ENST00000557916 COL6A6A6NMZ7 2263 aa23.59■■□□□ 1.37
SMAD6-202ENST00000557916 NCF2P19878 526 aaPredicted RBP23.59■■□□□ 1.37
SMAD6-202ENST00000557916 IRX1P78414 480 aaPredicted RBP23.59■■□□□ 1.37
SMAD6-202ENST00000557916 PRR5P85299 388 aa23.59■■□□□ 1.37
SMAD6-202ENST00000557916 LYPD8Q6UX82 237 aa23.59■■□□□ 1.37
SMAD6-202ENST00000557916 TMEM64Q6YI46 380 aa23.59■■□□□ 1.37
SMAD6-202ENST00000557916 TMEM125Q96AQ2 219 aa23.59■■□□□ 1.37
SMAD6-202ENST00000557916 HSPBAP1Q96EW2 488 aa23.59■■□□□ 1.37
SMAD6-202ENST00000557916 C5orf34Q96MH7 638 aa23.59■■□□□ 1.37
SMAD6-202ENST00000557916 BTBD9Q96Q07 612 aa23.59■■□□□ 1.37
SMAD6-202ENST00000557916 OR52E6Q96RD3 313 aa23.59■■□□□ 1.37
SMAD6-202ENST00000557916 FRG2CA6NGY1 282 aa23.58■■□□□ 1.36
SMAD6-202ENST00000557916 B8ZZF3 427 aa23.58■■□□□ 1.36
SMAD6-202ENST00000557916 ACOX3O15254 700 aa23.58■■□□□ 1.36
SMAD6-202ENST00000557916 SLC25A12O75746 678 aa23.58■■□□□ 1.36
SMAD6-202ENST00000557916 SORBS2O94875 1100 aaKnown RBP23.58■■□□□ 1.36
SMAD6-202ENST00000557916 IL6P05231 212 aa23.58■■□□□ 1.36
SMAD6-202ENST00000557916 CT45A8P0DMV1 189 aa23.58■■□□□ 1.36
SMAD6-202ENST00000557916 CT45A9P0DMV2 189 aa23.58■■□□□ 1.36
SMAD6-202ENST00000557916 CCT3P49368 545 aaKnown RBP23.58■■□□□ 1.36
SMAD6-202ENST00000557916 ATP4BP51164 291 aa23.58■■□□□ 1.36
SMAD6-202ENST00000557916 POLR2JP52435 117 aaKnown RBP23.58■■□□□ 1.36
SMAD6-202ENST00000557916 CORO7P57737 925 aa23.58■■□□□ 1.36
SMAD6-202ENST00000557916 SPDYE7PQ495Y7 208 aa23.58■■□□□ 1.36
SMAD6-202ENST00000557916 CT45A2Q5DJT8 189 aa23.58■■□□□ 1.36
SMAD6-202ENST00000557916 SLC25A25Q6KCM7 469 aa23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms