RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 SLC35G5Q96KT7 338 aa11.15□□□□□ -0.62
VIPAS39-211ENST00000557658 HYLS1Q96M11 299 aa11.15□□□□□ -0.62
VIPAS39-211ENST00000557658 PRRC1Q96M27 445 aa11.15□□□□□ -0.62
VIPAS39-211ENST00000557658 GFM1Q96RP9 751 aaKnown RBP11.15□□□□□ -0.62
VIPAS39-211ENST00000557658 SPATA5L1Q9BVQ7 753 aa11.15□□□□□ -0.62
VIPAS39-211ENST00000557658 PLA2G12AQ9BZM1 189 aa11.15□□□□□ -0.62
VIPAS39-211ENST00000557658 SAP130Q9H0E3 1048 aa11.15□□□□□ -0.62
VIPAS39-211ENST00000557658 ABCG4Q9H172 646 aa11.15□□□□□ -0.62
VIPAS39-211ENST00000557658 TMEM39AQ9NV64 488 aa11.15□□□□□ -0.62
VIPAS39-211ENST00000557658 A0A1W2PQ72 361 aa11.15□□□□□ -0.63
VIPAS39-211ENST00000557658 TSPAN11A1L157 253 aa11.15□□□□□ -0.63
VIPAS39-211ENST00000557658 CHST10O43529 356 aa11.15□□□□□ -0.63
VIPAS39-211ENST00000557658 NCR1O76036 304 aa11.15□□□□□ -0.63
VIPAS39-211ENST00000557658 UBXN7O94888 489 aa11.15□□□□□ -0.63
VIPAS39-211ENST00000557658 NUDT1P36639 197 aa11.15□□□□□ -0.63
VIPAS39-211ENST00000557658 SLC1A3P43003 542 aa11.15□□□□□ -0.63
VIPAS39-211ENST00000557658 SREBF2Q12772 1141 aa11.15□□□□□ -0.63
VIPAS39-211ENST00000557658 ADAM15Q13444 863 aa11.15□□□□□ -0.63
VIPAS39-211ENST00000557658 SMUG1Q53HV7 270 aa11.15□□□□□ -0.63
VIPAS39-211ENST00000557658 BICRALQ6AI39 1079 aa11.15□□□□□ -0.63
VIPAS39-211ENST00000557658 LAMTOR1Q6IAA8 161 aa11.15□□□□□ -0.63
VIPAS39-211ENST00000557658 LCTLQ6UWM7 567 aa11.15□□□□□ -0.63
VIPAS39-211ENST00000557658 SHFQ7M4L6 423 aa11.15□□□□□ -0.63
VIPAS39-211ENST00000557658 SZRD1Q7Z422 152 aa11.15□□□□□ -0.63
VIPAS39-211ENST00000557658 LHFPL3Q86UP9 236 aa11.15□□□□□ -0.63
VIPAS39-211ENST00000557658 COMTD1Q86VU5 262 aa11.15□□□□□ -0.63
VIPAS39-211ENST00000557658 TMEM25Q86YD3 366 aa11.15□□□□□ -0.63
VIPAS39-211ENST00000557658 TRAPPC5Q8IUR0 188 aa11.15□□□□□ -0.63
VIPAS39-211ENST00000557658 TP53I13Q8NBR0 393 aaPredicted RBP11.15□□□□□ -0.63
VIPAS39-211ENST00000557658 OR4M1Q8NGD0 313 aa11.15□□□□□ -0.63
VIPAS39-211ENST00000557658 CREB3L1Q96BA8 519 aa11.15□□□□□ -0.63
VIPAS39-211ENST00000557658 TMED9Q9BVK6 235 aa11.15□□□□□ -0.63
VIPAS39-211ENST00000557658 ZNF717Q9BY31 904 aaPredicted RBP11.15□□□□□ -0.63
VIPAS39-211ENST00000557658 OR51I1Q9H343 314 aa11.15□□□□□ -0.63
VIPAS39-211ENST00000557658 SERHL2Q9H4I8 314 aa11.15□□□□□ -0.63
VIPAS39-211ENST00000557658 EGLN3Q9H6Z9 239 aa11.15□□□□□ -0.63
VIPAS39-211ENST00000557658 TBC1D17Q9HA65 648 aa11.15□□□□□ -0.63
VIPAS39-211ENST00000557658 GALNT9Q9HCQ5 603 aa11.15□□□□□ -0.63
VIPAS39-211ENST00000557658 C5AR2Q9P296 337 aa11.15□□□□□ -0.63
VIPAS39-211ENST00000557658 TRPC4Q9UBN4 977 aa11.15□□□□□ -0.63
VIPAS39-211ENST00000557658 GPR52Q9Y2T5 361 aa11.15□□□□□ -0.63
VIPAS39-211ENST00000557658 CDH10Q9Y6N8 788 aa11.15□□□□□ -0.63
VIPAS39-211ENST00000557658 PRAMEF27A3QJZ7 478 aa11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 KDM4EB2RXH2 506 aaPredicted RBP11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 NEDD8-MDP1E9PL57 170 aa11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 SMLR1H3BR10 107 aa11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 AKAP8O43823 692 aaKnown RBP11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 SOX18P35713 384 aa11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 IFNGR2P38484 337 aa11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 CD79BP40259 229 aa11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 FRKP42685 505 aaPredicted RBP11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 SLC6A11P48066 632 aa11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 LSM11P83369 360 aaKnown RBP eCLIP11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 ANGPT1Q15389 498 aa11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 MRGPREQ86SM8 312 aa11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 FAM129CQ86XR2 697 aa11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 NRSN1Q8IZ57 195 aa11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 ARIH2OSQ8N7S6 290 aa11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 ZNF485Q8NCK3 441 aa11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 OR6T1Q8NGN1 323 aa11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 BBS10Q8TAM1 723 aa11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 GNPDA2Q8TDQ7 276 aa11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 AUTS2Q8WXX7 1259 aa11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 SMG7Q92540 1137 aaKnown RBP11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 F2RL3Q96RI0 385 aa11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 HDHD5Q9BXW7 423 aa11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 ZCCHC2Q9C0B9 1178 aaKnown RBP11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 SMG9Q9H0W8 520 aaKnown RBP11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 SATB2Q9UPW6 733 aa11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 POLHQ9Y253 713 aa11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 GABRPO00591 440 aa11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 LALBAP00709 142 aa11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 HOXD11P31277 338 aaPredicted RBP11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 IFNA8P32881 189 aa11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 BSGP35613 385 aa11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 CDH11P55287 796 aa11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 BTG1P62324 171 aa11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 DSG2Q14126 1118 aa11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 UAP1L1Q3KQV9 507 aa11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 ESCO2Q56NI9 601 aa11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 LIPIQ6XZB0 460 aa11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 FAM83HQ6ZRV2 1179 aaPredicted RBP11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 TRILQ7L0X0 811 aa11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 KLHL36Q8N4N3 616 aa11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 OR5D16Q8NGK9 328 aa11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 RAET1EQ8TD07 263 aa11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 RFKQ969G6 155 aa11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 SENP5Q96HI0 755 aaPredicted RBP11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 WACQ9BTA9 647 aa11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 HDHD2Q9H0R4 259 aa11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 ACSS1Q9NUB1 689 aaPredicted RBP11.14□□□□□ -0.63
VIPAS39-211ENST00000557658 ZSCAN5BA6NJL1 495 aa11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 GJA1P17302 382 aa11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 CELP19835 753 aa11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 EVI2BP34910 448 aa11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 MMP12P39900 470 aa11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 ATP12AP54707 1039 aa11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 CTBP2P56545 445 aa11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 TMEM44Q2T9K0 475 aa11.13□□□□□ -0.63
VIPAS39-211ENST00000557658 ZNF805Q5CZA5 627 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms