RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 SLC4A1P02730 911 aa3.89□□□□□ -1.79
PRPF39-212ENST00000557477 GSTA2P09210 222 aa3.89□□□□□ -1.79
PRPF39-212ENST00000557477 ZNF24P17028 368 aa3.89□□□□□ -1.79
PRPF39-212ENST00000557477 GPX3P22352 226 aa3.89□□□□□ -1.79
PRPF39-212ENST00000557477 AHCYP23526 432 aa3.89□□□□□ -1.79
PRPF39-212ENST00000557477 U2AF2P26368 475 aaKnown RBP eCLIP3.89□□□□□ -1.792e-21■■■■□ 26.2
PRPF39-212ENST00000557477 MAGEA9P43362 315 aa3.89□□□□□ -1.79
PRPF39-212ENST00000557477 GYG1P46976 350 aa3.89□□□□□ -1.79
PRPF39-212ENST00000557477 CCR4P51679 360 aa3.89□□□□□ -1.79
PRPF39-212ENST00000557477 SH3BGRP55822 239 aaPredicted RBP3.89□□□□□ -1.79
PRPF39-212ENST00000557477 STARD6P59095 220 aa3.89□□□□□ -1.79
PRPF39-212ENST00000557477 SRP54P61011 504 aaKnown RBP3.89□□□□□ -1.79
PRPF39-212ENST00000557477 NUCB2P80303 420 aa3.89□□□□□ -1.79
PRPF39-212ENST00000557477 MECOMQ03112 1051 aa3.89□□□□□ -1.79
PRPF39-212ENST00000557477 MFGE8Q08431 387 aaPredicted RBP3.89□□□□□ -1.79
PRPF39-212ENST00000557477 WASHC5Q12768 1159 aa3.89□□□□□ -1.79
PRPF39-212ENST00000557477 WSCD2Q2TBF2 565 aa3.89□□□□□ -1.79
PRPF39-212ENST00000557477 ADAMTSL2Q86TH1 951 aa3.89□□□□□ -1.79
PRPF39-212ENST00000557477 CCDC65Q8IXS2 484 aa3.89□□□□□ -1.79
PRPF39-212ENST00000557477 C10orf67Q8IYJ2 551 aa3.89□□□□□ -1.79
PRPF39-212ENST00000557477 CERS5Q8N5B7 392 aa3.89□□□□□ -1.79
PRPF39-212ENST00000557477 AQP11Q8NBQ7 271 aa3.89□□□□□ -1.79
PRPF39-212ENST00000557477 NUP37Q8NFH4 326 aa3.89□□□□□ -1.79
PRPF39-212ENST00000557477 EXOC6Q8TAG9 804 aa3.89□□□□□ -1.79
PRPF39-212ENST00000557477 MIPOL1Q8TD10 442 aa3.89□□□□□ -1.79
PRPF39-212ENST00000557477 SLC13A3Q8WWT9 602 aa3.89□□□□□ -1.79
PRPF39-212ENST00000557477 LIPHQ8WWY8 451 aa3.89□□□□□ -1.79
PRPF39-212ENST00000557477 SLCO4A1Q96BD0 722 aa3.89□□□□□ -1.79
PRPF39-212ENST00000557477 ATXN7L3BQ96GX2 97 aa3.89□□□□□ -1.79
PRPF39-212ENST00000557477 PCED1BQ96HM7 432 aa3.89□□□□□ -1.79
PRPF39-212ENST00000557477 CXorf58Q96LI9 332 aa3.89□□□□□ -1.79
PRPF39-212ENST00000557477 NSMCE3Q96MG7 304 aa3.89□□□□□ -1.79
PRPF39-212ENST00000557477 RUFY1Q96T51 708 aa3.89□□□□□ -1.79
PRPF39-212ENST00000557477 NAP1L3Q99457 506 aaPredicted RBP3.89□□□□□ -1.79
PRPF39-212ENST00000557477 S1PR3Q99500 378 aa3.89□□□□□ -1.79
PRPF39-212ENST00000557477 WWP1Q9H0M0 922 aa3.89□□□□□ -1.79
PRPF39-212ENST00000557477 ABCG8Q9H221 673 aa3.89□□□□□ -1.79
PRPF39-212ENST00000557477 TNMDQ9H2S6 317 aa3.89□□□□□ -1.79
PRPF39-212ENST00000557477 SYTL2Q9HCH5 934 aa3.89□□□□□ -1.79
PRPF39-212ENST00000557477 B3GAT2Q9NPZ5 323 aa3.89□□□□□ -1.79
PRPF39-212ENST00000557477 MED17Q9NVC6 651 aa3.89□□□□□ -1.79
PRPF39-212ENST00000557477 TECRQ9NZ01 308 aaKnown RBP3.89□□□□□ -1.79
PRPF39-212ENST00000557477 CHMP5Q9NZZ3 219 aa3.89□□□□□ -1.79
PRPF39-212ENST00000557477 NDUFA13Q9P0J0 144 aa3.89□□□□□ -1.79
PRPF39-212ENST00000557477 SPATA7Q9P0W8 599 aa3.89□□□□□ -1.79
PRPF39-212ENST00000557477 MDFICQ9P1T7 246 aa3.89□□□□□ -1.79
PRPF39-212ENST00000557477 CLIP2Q9UDT6 1046 aa3.89□□□□□ -1.79
PRPF39-212ENST00000557477 BARX2Q9UMQ3 279 aaPredicted RBP3.89□□□□□ -1.79
PRPF39-212ENST00000557477 RPH3AQ9Y2J0 694 aaPredicted RBP3.89□□□□□ -1.79
PRPF39-212ENST00000557477 STRAPQ9Y3F4 350 aaKnown RBP3.89□□□□□ -1.79
PRPF39-212ENST00000557477 N6AMT1Q9Y5N5 214 aa3.89□□□□□ -1.79
PRPF39-212ENST00000557477 UMODL1Q5DID0 1318 aa3.89□□□□□ -1.79
PRPF39-212ENST00000557477 TRIOBPQ9H2D6 2365 aa3.89□□□□□ -1.79
PRPF39-212ENST00000557477 ECM29Q5VYK3 1845 aa3.88□□□□□ -1.79
PRPF39-212ENST00000557477 TRBV2A0A0J9YWF9 115 aa3.88□□□□□ -1.79
PRPF39-212ENST00000557477 SH3PXD2BA1X283 911 aa3.88□□□□□ -1.79
PRPF39-212ENST00000557477 MACROD2A1Z1Q3 448 aa3.88□□□□□ -1.79
PRPF39-212ENST00000557477 RNF103O00237 685 aa3.88□□□□□ -1.79
PRPF39-212ENST00000557477 OGTO15294 1046 aa3.88□□□□□ -1.79
PRPF39-212ENST00000557477 E2F6O75461 281 aa3.88□□□□□ -1.79
PRPF39-212ENST00000557477 ERLIN1O75477 346 aa3.88□□□□□ -1.79
PRPF39-212ENST00000557477 LYNP07948 512 aa3.88□□□□□ -1.79
PRPF39-212ENST00000557477 CT45A8P0DMV1 189 aa3.88□□□□□ -1.79
PRPF39-212ENST00000557477 CT45A9P0DMV2 189 aa3.88□□□□□ -1.79
PRPF39-212ENST00000557477 AOC1P19801 751 aa3.88□□□□□ -1.79
PRPF39-212ENST00000557477 GLRA1P23415 457 aa3.88□□□□□ -1.79
PRPF39-212ENST00000557477 MNAT1P51948 309 aa3.88□□□□□ -1.79
PRPF39-212ENST00000557477 HNRNPFP52597 415 aaKnown RBP3.88□□□□□ -1.79
PRPF39-212ENST00000557477 HERV-K104P63124 156 aa3.88□□□□□ -1.79
PRPF39-212ENST00000557477 PPP1R8Q12972 351 aaKnown RBP3.88□□□□□ -1.79
PRPF39-212ENST00000557477 MEF2DQ14814 521 aa3.88□□□□□ -1.79
PRPF39-212ENST00000557477 CT45A2Q5DJT8 189 aa3.88□□□□□ -1.79
PRPF39-212ENST00000557477 GFI1BQ5VTD9 330 aa3.88□□□□□ -1.79
PRPF39-212ENST00000557477 ADAM5Q6NVV9 412 aa3.88□□□□□ -1.79
PRPF39-212ENST00000557477 NEPROQ6NW34 567 aa3.88□□□□□ -1.79
PRPF39-212ENST00000557477 DLEU7Q6UYE1 221 aa3.88□□□□□ -1.79
PRPF39-212ENST00000557477 TMEM185AQ8NFB2 350 aa3.88□□□□□ -1.79
PRPF39-212ENST00000557477 OR4L1Q8NH43 312 aa3.88□□□□□ -1.79
PRPF39-212ENST00000557477 C8orf46Q8TAG6 207 aa3.88□□□□□ -1.79
PRPF39-212ENST00000557477 GIMAP1Q8WWP7 306 aa3.88□□□□□ -1.79
PRPF39-212ENST00000557477 ZBED3Q96IU2 234 aaPredicted RBP3.88□□□□□ -1.79
PRPF39-212ENST00000557477 IWS1Q96ST2 819 aa3.88□□□□□ -1.79
PRPF39-212ENST00000557477 ZNF577Q9BSK1 485 aa3.88□□□□□ -1.79
PRPF39-212ENST00000557477 SPXQ9BT56 116 aa3.88□□□□□ -1.79
PRPF39-212ENST00000557477 TRIM6Q9C030 488 aaPredicted RBP3.88□□□□□ -1.79
PRPF39-212ENST00000557477 ABCG4Q9H172 646 aa3.88□□□□□ -1.79
PRPF39-212ENST00000557477 CXXC4Q9H2H0 198 aa3.88□□□□□ -1.79
PRPF39-212ENST00000557477 C11orf49Q9H6J7 331 aa3.88□□□□□ -1.79
PRPF39-212ENST00000557477 DDX28Q9NUL7 540 aaKnown RBP3.88□□□□□ -1.79
PRPF39-212ENST00000557477 TEX10Q9NXF1 929 aaPredicted RBP3.88□□□□□ -1.79
PRPF39-212ENST00000557477 QPCTLQ9NXS2 382 aa3.88□□□□□ -1.79
PRPF39-212ENST00000557477 ASIC3Q9UHC3 531 aa3.88□□□□□ -1.79
PRPF39-212ENST00000557477 TMCC3Q9ULS5 477 aa3.88□□□□□ -1.79
PRPF39-212ENST00000557477 MRPS18CQ9Y3D5 142 aaKnown RBP3.88□□□□□ -1.79
PRPF39-212ENST00000557477 ZHX2Q9Y6X8 837 aa3.88□□□□□ -1.79
PRPF39-212ENST00000557477 MKI67P46013 3256 aaKnown RBP3.88□□□□□ -1.79
PRPF39-212ENST00000557477 ARID2Q68CP9 1835 aa3.88□□□□□ -1.79
PRPF39-212ENST00000557477 MYH3P11055 1940 aa3.87□□□□□ -1.79
PRPF39-212ENST00000557477 HTTP42858 3142 aa3.87□□□□□ -1.79
PRPF39-212ENST00000557477 CENPFP49454 3210 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms