RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 BNC2Q6ZN30 1099 aaPredicted RBP9.85□□□□□ -0.83
LINC00239-201ENST00000556973 LARP4Q71RC2 724 aaKnown RBP eCLIP9.85□□□□□ -0.83
LINC00239-201ENST00000556973 OR2L13Q8N349 312 aa9.85□□□□□ -0.83
LINC00239-201ENST00000556973 CPSF7Q8N684 471 aaKnown RBP9.85□□□□□ -0.83
LINC00239-201ENST00000556973 ZFP62Q8NB50 900 aaPredicted RBP9.85□□□□□ -0.83
LINC00239-201ENST00000556973 OR2M7Q8NG81 312 aa9.85□□□□□ -0.83
LINC00239-201ENST00000556973 OR7G2Q8NG99 324 aa9.85□□□□□ -0.83
LINC00239-201ENST00000556973 CLHC1Q8NHS4 586 aa9.85□□□□□ -0.83
LINC00239-201ENST00000556973 ZFP28Q8NHY6 868 aa9.85□□□□□ -0.83
LINC00239-201ENST00000556973 PRR7Q8TB68 274 aa9.85□□□□□ -0.83
LINC00239-201ENST00000556973 FAM173AQ9BQD7 235 aa9.85□□□□□ -0.83
LINC00239-201ENST00000556973 ITPAQ9BY32 194 aa9.85□□□□□ -0.83
LINC00239-201ENST00000556973 NXF5Q9H1B4 397 aaKnown RBP9.85□□□□□ -0.83
LINC00239-201ENST00000556973 ANKRA2Q9H9E1 313 aa9.85□□□□□ -0.83
LINC00239-201ENST00000556973 SH2D2AQ9NP31 389 aa9.85□□□□□ -0.83
LINC00239-201ENST00000556973 ACSS1Q9NUB1 689 aaPredicted RBP9.85□□□□□ -0.83
LINC00239-201ENST00000556973 ATAD3AQ9NVI7 634 aa9.85□□□□□ -0.83
LINC00239-201ENST00000556973 C19orf53Q9UNZ5 99 aaPredicted RBP9.85□□□□□ -0.83
LINC00239-201ENST00000556973 DTX4Q9Y2E6 619 aa9.85□□□□□ -0.83
LINC00239-201ENST00000556973 GPR55Q9Y2T6 319 aaPredicted RBP9.85□□□□□ -0.83
LINC00239-201ENST00000556973 ZNF462Q96JM2 2506 aa9.85□□□□□ -0.83
LINC00239-201ENST00000556973 EXPH5Q8NEV8 1989 aa9.84□□□□□ -0.83
LINC00239-201ENST00000556973 A0A1W2PRB8 838 aa9.84□□□□□ -0.83
LINC00239-201ENST00000556973 ANKRD33BA6NCL7 494 aa9.84□□□□□ -0.83
LINC00239-201ENST00000556973 FRG2CA6NGY1 282 aa9.84□□□□□ -0.83
LINC00239-201ENST00000556973 NPIPA5E9PKD4 350 aa9.84□□□□□ -0.83
LINC00239-201ENST00000556973 UPK1AO00322 258 aa9.84□□□□□ -0.83
LINC00239-201ENST00000556973 TP53I11O14683 189 aa9.84□□□□□ -0.83
LINC00239-201ENST00000556973 SCAMP2O15127 329 aaKnown RBP9.84□□□□□ -0.83
LINC00239-201ENST00000556973 TO15178 435 aa9.84□□□□□ -0.83
LINC00239-201ENST00000556973 ASNA1O43681 348 aa9.84□□□□□ -0.83
LINC00239-201ENST00000556973 CT45A8P0DMV1 189 aa9.84□□□□□ -0.83
LINC00239-201ENST00000556973 CT45A9P0DMV2 189 aa9.84□□□□□ -0.83
LINC00239-201ENST00000556973 CCL3P10147 92 aa9.84□□□□□ -0.83
LINC00239-201ENST00000556973 KITP10721 976 aa9.84□□□□□ -0.83
LINC00239-201ENST00000556973 GPC1P35052 558 aa9.84□□□□□ -0.83
LINC00239-201ENST00000556973 C21orf58P58505 322 aa9.84□□□□□ -0.83
LINC00239-201ENST00000556973 GPR85P60893 370 aa9.84□□□□□ -0.83
LINC00239-201ENST00000556973 PPP2R2AP63151 447 aa9.84□□□□□ -0.83
LINC00239-201ENST00000556973 RPP38P78345 283 aaKnown RBP9.84□□□□□ -0.83
LINC00239-201ENST00000556973 SRSF11Q05519 484 aaKnown RBP9.84□□□□□ -0.83
LINC00239-201ENST00000556973 HSPB3Q12988 150 aa9.84□□□□□ -0.83
LINC00239-201ENST00000556973 PTGR1Q14914 329 aa9.84□□□□□ -0.83
LINC00239-201ENST00000556973 ZNF385BQ569K4 471 aa9.84□□□□□ -0.83
LINC00239-201ENST00000556973 CT45A2Q5DJT8 189 aa9.84□□□□□ -0.83
LINC00239-201ENST00000556973 TBCELQ5QJ74 424 aa9.84□□□□□ -0.83
LINC00239-201ENST00000556973 CPTPQ5TA50 214 aa9.84□□□□□ -0.83
LINC00239-201ENST00000556973 GFRALQ6UXV0 394 aa9.84□□□□□ -0.83
LINC00239-201ENST00000556973 RGS9BPQ6ZS82 235 aa9.84□□□□□ -0.83
LINC00239-201ENST00000556973 GK5Q6ZS86 529 aa9.84□□□□□ -0.83
LINC00239-201ENST00000556973 FAM47EQ6ZV65 393 aa9.84□□□□□ -0.83
LINC00239-201ENST00000556973 ZNF551Q7Z340 670 aaPredicted RBP9.84□□□□□ -0.83
LINC00239-201ENST00000556973 NUP54Q7Z3B4 507 aa9.84□□□□□ -0.83
LINC00239-201ENST00000556973 SPATA19Q7Z5L4 167 aa9.84□□□□□ -0.83
LINC00239-201ENST00000556973 WDR75Q8IWA0 830 aaKnown RBP9.84□□□□□ -0.83
LINC00239-201ENST00000556973 RIMKLAQ8IXN7 391 aa9.84□□□□□ -0.83
LINC00239-201ENST00000556973 FBXW8Q8N3Y1 598 aa9.84□□□□□ -0.83
LINC00239-201ENST00000556973 FAM13CQ8NE31 585 aa9.84□□□□□ -0.83
LINC00239-201ENST00000556973 OR7A2PQ8NGA2 310 aa9.84□□□□□ -0.83
LINC00239-201ENST00000556973 PIWIL2Q8TC59 973 aaKnown RBP9.84□□□□□ -0.83
LINC00239-201ENST00000556973 CIDECQ96AQ7 238 aaPredicted RBP9.84□□□□□ -0.83
LINC00239-201ENST00000556973 COQ8BQ96D53 544 aa9.84□□□□□ -0.83
LINC00239-201ENST00000556973 GPR137Q96N19 417 aa9.84□□□□□ -0.83
LINC00239-201ENST00000556973 BTBD9Q96Q07 612 aa9.84□□□□□ -0.83
LINC00239-201ENST00000556973 SECISBP2Q96T21 854 aaKnown RBP9.84□□□□□ -0.83
LINC00239-201ENST00000556973 FOLH1BQ9HBA9 442 aa9.84□□□□□ -0.83
LINC00239-201ENST00000556973 C3orf14Q9HBI5 128 aa9.84□□□□□ -0.83
LINC00239-201ENST00000556973 DEPPQ9NTK1 212 aa9.84□□□□□ -0.83
LINC00239-201ENST00000556973 DDX18Q9NVP1 670 aaKnown RBP9.84□□□□□ -0.83
LINC00239-201ENST00000556973 NPIPA1Q9UND3 350 aa9.84□□□□□ -0.83
LINC00239-201ENST00000556973 CHCHD2Q9Y6H1 151 aaPredicted RBP9.84□□□□□ -0.83
LINC00239-201ENST00000556973 PINLYPA6NC86 204 aa9.83□□□□□ -0.84
LINC00239-201ENST00000556973 TTC36A6NLP5 189 aa9.83□□□□□ -0.84
LINC00239-201ENST00000556973 ERN1O75460 977 aaKnown RBP9.83□□□□□ -0.84
LINC00239-201ENST00000556973 PPM1BO75688 479 aa9.83□□□□□ -0.84
LINC00239-201ENST00000556973 SASH3O75995 380 aa9.83□□□□□ -0.84
LINC00239-201ENST00000556973 UNC5CO95185 931 aa9.83□□□□□ -0.84
LINC00239-201ENST00000556973 PSMG1O95456 288 aa9.83□□□□□ -0.84
LINC00239-201ENST00000556973 ABCB1P08183 1280 aaPredicted RBP9.83□□□□□ -0.84
LINC00239-201ENST00000556973 ZNF24P17028 368 aa9.83□□□□□ -0.84
LINC00239-201ENST00000556973 PIGAP37287 484 aa9.83□□□□□ -0.84
LINC00239-201ENST00000556973 MC3RP41968 323 aa9.83□□□□□ -0.84
LINC00239-201ENST00000556973 FBXW4P57775 412 aa9.83□□□□□ -0.84
LINC00239-201ENST00000556973 PLGLB1Q02325 96 aa9.83□□□□□ -0.84
LINC00239-201ENST00000556973 RBPJQ06330 500 aa9.83□□□□□ -0.84
LINC00239-201ENST00000556973 UBAP2LQ14157 1087 aaKnown RBP9.83□□□□□ -0.84
LINC00239-201ENST00000556973 RPS6KA2Q15349 733 aa9.83□□□□□ -0.84
LINC00239-201ENST00000556973 ZNHIT3Q15649 155 aaPredicted RBP9.83□□□□□ -0.84
LINC00239-201ENST00000556973 HYAL4Q2M3T9 481 aa9.83□□□□□ -0.84
LINC00239-201ENST00000556973 LSM12Q3MHD2 195 aaKnown RBP9.83□□□□□ -0.84
LINC00239-201ENST00000556973 RNFT1Q5M7Z0 435 aa9.83□□□□□ -0.84
LINC00239-201ENST00000556973 OGFOD2Q6N063 350 aa9.83□□□□□ -0.84
LINC00239-201ENST00000556973 TMEM64Q6YI46 380 aa9.83□□□□□ -0.84
LINC00239-201ENST00000556973 CAMKMTQ7Z624 323 aa9.83□□□□□ -0.84
LINC00239-201ENST00000556973 SIAH3Q8IW03 269 aa9.83□□□□□ -0.84
LINC00239-201ENST00000556973 PRR22Q8IZ63 422 aa9.83□□□□□ -0.84
LINC00239-201ENST00000556973 OR10G3Q8NGC4 313 aa9.83□□□□□ -0.84
LINC00239-201ENST00000556973 OR5M3Q8NGP4 307 aa9.83□□□□□ -0.84
LINC00239-201ENST00000556973 CEP70Q8NHQ1 597 aa9.83□□□□□ -0.84
LINC00239-201ENST00000556973 SPPL2AQ8TCT8 520 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms