RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 FPR3P25089 353 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 PRDX6P30041 224 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 PRKAR1BP31321 381 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 SLC8A1P32418 973 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 HMGCLP35914 325 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 WNT5AP41221 380 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 CSKP41240 450 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 ZNF140P52738 457 aaPredicted RBP4.84□□□□□ -1.63
SRP54-211ENST00000556445 STC1P52823 247 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 TAS2R39P59534 338 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 C1QTNF8P60827 252 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 ATP6V0D1P61421 351 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 NCALDP61601 193 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 POLR2LP62875 67 aaKnown RBP4.84□□□□□ -1.63
SRP54-211ENST00000556445 IRX4P78413 519 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 IRX1P78414 480 aaPredicted RBP4.84□□□□□ -1.63
SRP54-211ENST00000556445 CACNG1Q06432 222 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 ACSM1Q08AH1 577 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 ACSM2AQ08AH3 577 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 PDZK1IP1Q13113 114 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 ITGA9Q13797 1035 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 KCNC3Q14003 757 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 DOC2AQ14183 400 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 TBC1D25Q3MII6 688 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 AASDHQ4L235 1098 aaPredicted RBP4.84□□□□□ -1.63
SRP54-211ENST00000556445 RNASE12Q5GAN4 147 aaKnown RBP4.84□□□□□ -1.63
SRP54-211ENST00000556445 CXorf66Q5JRM2 361 aaPredicted RBP4.84□□□□□ -1.63
SRP54-211ENST00000556445 FAM182AQ5T1J6 154 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 METTL11BQ5VVY1 283 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 PRAMEF8Q5VWM4 474 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 PLPP4Q5VZY2 271 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 ACSM2BQ68CK6 577 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 LRRC8EQ6NSJ5 796 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 PAPD4Q6PIY7 484 aaKnown RBP4.84□□□□□ -1.63
SRP54-211ENST00000556445 WDR5BQ86VZ2 330 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 NUDT13Q86X67 352 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 ZNF573Q86YE8 665 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 C10orf107Q8IVU9 208 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 SIAH3Q8IW03 269 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 DENND6AQ8IWF6 608 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 MCEMP1Q8IX19 187 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 CFAP206Q8IYR0 622 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 METTL25Q8N6Q8 603 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 PCDH20Q8N6Y1 951 aaKnown RBP4.84□□□□□ -1.63
SRP54-211ENST00000556445 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.84□□□□□ -1.63
SRP54-211ENST00000556445 C11orf44Q8N8P7 122 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 TERB1Q8NA31 727 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 OR4K2Q8NGD2 314 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 OR2AP1Q8NGE2 309 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 OR8K3Q8NH51 312 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 RHEBL1Q8TAI7 183 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 ELP5Q8TE02 316 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 WFIKKN2Q8TEU8 576 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 KCTD4Q8WVF5 259 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 KCNJ9Q92806 393 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 EXT2Q93063 718 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 SNRNP40Q96DI7 357 aaKnown RBP4.84□□□□□ -1.63
SRP54-211ENST00000556445 RITA1Q96K30 269 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 DNAJC1Q96KC8 554 aaKnown RBP4.84□□□□□ -1.63
SRP54-211ENST00000556445 NSMCE2Q96MF7 247 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 NECTIN4Q96NY8 510 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 CYP2S1Q96SQ9 504 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 OMDQ99983 421 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 H2AFJQ9BTM1 129 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 DRC3Q9H069 523 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 S1PR5Q9H228 398 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 LRMDAQ9H2I8 198 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 MMP27Q9H306 513 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 NOL11Q9H8H0 719 aaKnown RBP4.84□□□□□ -1.63
SRP54-211ENST00000556445 KCNK13Q9HB14 408 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 RANGRFQ9HD47 186 aaPredicted RBP4.84□□□□□ -1.63
SRP54-211ENST00000556445 HPS4Q9NQG7 708 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 FBXO6Q9NRD1 293 aaPredicted RBP4.84□□□□□ -1.63
SRP54-211ENST00000556445 LHX3Q9UBR4 397 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 SLC2A6Q9UGQ3 507 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 BAIAP2L1Q9UHR4 511 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 ATP6V1HQ9UI12 483 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 OR51B4Q9Y5P0 310 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 SPACA6W5XKT8 324 aa4.84□□□□□ -1.63
SRP54-211ENST00000556445 ANKRD36A6QL64 1941 aa4.84□□□□□ -1.64
SRP54-211ENST00000556445 A0A087WZY1 265 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 CCDC162PA2VCL2 907 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 LINC01553A4QN01 128 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 MFSD2BA6NFX1 497 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 MAGEB17A8MXT2 336 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 USP17L23D6RBM5 183 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 SPECC1L-ADORA2AF8WAN1 911 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 AP4M1O00189 453 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 HDAC3O15379 428 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 CCL16O15467 120 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 SNAP91O60641 907 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 RHOBTB1O94844 696 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 PGLSO95336 258 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 LCATP04180 440 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 LIPFP07098 398 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 CCDC166P0CW27 439 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 CYP4B1P13584 511 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 PKMP14618 531 aaKnown RBP4.83□□□□□ -1.64
SRP54-211ENST00000556445 ZNF30P17039 623 aa4.83□□□□□ -1.64
SRP54-211ENST00000556445 ZNF7P17097 686 aaPredicted RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms