RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 WIPI1Q5MNZ9 446 aaPredicted RBP20.65■□□□□ 0.9
ACTN1-220ENST00000556433 ZNF678Q5SXM1 525 aa20.65■□□□□ 0.9
ACTN1-220ENST00000556433 SPNS3Q6ZMD2 512 aa20.65■□□□□ 0.9
ACTN1-220ENST00000556433 ZZZ3Q8IYH5 903 aa20.65■□□□□ 0.9
ACTN1-220ENST00000556433 OR1J4Q8NGS1 313 aa20.65■□□□□ 0.9
ACTN1-220ENST00000556433 HGDQ93099 445 aa20.65■□□□□ 0.9
ACTN1-220ENST00000556433 CTHRC1Q96CG8 243 aa20.65■□□□□ 0.9
ACTN1-220ENST00000556433 NTNG2Q96CW9 530 aa20.65■□□□□ 0.9
ACTN1-220ENST00000556433 MTBPQ96DY7 904 aa20.65■□□□□ 0.9
ACTN1-220ENST00000556433 OMA1Q96E52 524 aa20.65■□□□□ 0.9
ACTN1-220ENST00000556433 CNRIP1Q96F85 164 aaPredicted RBP20.65■□□□□ 0.9
ACTN1-220ENST00000556433 ZNF681Q96N22 645 aa20.65■□□□□ 0.9
ACTN1-220ENST00000556433 NODALQ96S42 347 aa20.65■□□□□ 0.9
ACTN1-220ENST00000556433 PRDM14Q9GZV8 571 aa20.65■□□□□ 0.9
ACTN1-220ENST00000556433 PRODH2Q9UF12 536 aa20.65■□□□□ 0.9
ACTN1-220ENST00000556433 UTS2RQ9UKP6 389 aa20.65■□□□□ 0.9
ACTN1-220ENST00000556433 NFU1Q9UMS0 254 aa20.65■□□□□ 0.9
ACTN1-220ENST00000556433 CAMK2AQ9UQM7 478 aa20.65■□□□□ 0.9
ACTN1-220ENST00000556433 PLLPQ9Y342 182 aa20.65■□□□□ 0.9
ACTN1-220ENST00000556433 C2orf72A6NCS6 295 aa20.64■□□□□ 0.89
ACTN1-220ENST00000556433 DVL2O14641 736 aa20.64■□□□□ 0.89
ACTN1-220ENST00000556433 ACOX3O15254 700 aa20.64■□□□□ 0.89
ACTN1-220ENST00000556433 DLX3O60479 287 aa20.64■□□□□ 0.89
ACTN1-220ENST00000556433 ULK1O75385 1050 aa20.64■□□□□ 0.89
ACTN1-220ENST00000556433 ABHD2P08910 425 aa20.64■□□□□ 0.89
ACTN1-220ENST00000556433 HSD3B1P14060 373 aa20.64■□□□□ 0.89
ACTN1-220ENST00000556433 CHN1P15882 459 aa20.64■□□□□ 0.89
ACTN1-220ENST00000556433 PCSK2P16519 638 aa20.64■□□□□ 0.89
ACTN1-220ENST00000556433 BMP7P18075 431 aa20.64■□□□□ 0.89
ACTN1-220ENST00000556433 HSD3B2P26439 372 aa20.64■□□□□ 0.89
ACTN1-220ENST00000556433 GCAP28676 217 aa20.64■□□□□ 0.89
ACTN1-220ENST00000556433 PTPN6P29350 595 aa20.64■□□□□ 0.89
ACTN1-220ENST00000556433 UQCRC1P31930 480 aa20.64■□□□□ 0.89
ACTN1-220ENST00000556433 TIMP3P35625 211 aa20.64■□□□□ 0.89
ACTN1-220ENST00000556433 KIR2DL3P43628 341 aa20.64■□□□□ 0.89
ACTN1-220ENST00000556433 PLCXD2Q0VAA5 305 aa20.64■□□□□ 0.89
ACTN1-220ENST00000556433 SLC30A6Q6NXT4 461 aa20.64■□□□□ 0.89
ACTN1-220ENST00000556433 ANGPTL8Q6UXH0 198 aa20.64■□□□□ 0.89
ACTN1-220ENST00000556433 GPRIN3Q6ZVF9 776 aa20.64■□□□□ 0.89
ACTN1-220ENST00000556433 LACC1Q8IV20 430 aa20.64■□□□□ 0.89
ACTN1-220ENST00000556433 CCDC116Q8IYX3 515 aa20.64■□□□□ 0.89
ACTN1-220ENST00000556433 RELL2Q8NC24 303 aaPredicted RBP20.64■□□□□ 0.89
ACTN1-220ENST00000556433 NAXEQ8NCW5 288 aa20.64■□□□□ 0.89
ACTN1-220ENST00000556433 METTL6Q8TCB7 284 aa20.64■□□□□ 0.89
ACTN1-220ENST00000556433 UGT2B28Q9BY64 529 aa20.64■□□□□ 0.89
ACTN1-220ENST00000556433 PFDN4Q9NQP4 134 aa20.64■□□□□ 0.89
ACTN1-220ENST00000556433 HEY2Q9UBP5 337 aa20.64■□□□□ 0.89
ACTN1-220ENST00000556433 MCM8Q9UJA3 840 aa20.64■□□□□ 0.89
ACTN1-220ENST00000556433 HIVEP1P15822 2718 aa20.63■□□□□ 0.89
ACTN1-220ENST00000556433 IL2RAP01589 272 aa20.63■□□□□ 0.89
ACTN1-220ENST00000556433 IMPDH1P20839 514 aa20.63■□□□□ 0.89
ACTN1-220ENST00000556433 DRD5P21918 477 aa20.63■□□□□ 0.89
ACTN1-220ENST00000556433 ATP5F1P24539 256 aaPredicted RBP20.63■□□□□ 0.89
ACTN1-220ENST00000556433 HMOX2P30519 316 aa20.63■□□□□ 0.89
ACTN1-220ENST00000556433 PPICP45877 212 aa20.63■□□□□ 0.89
ACTN1-220ENST00000556433 EMDP50402 254 aa20.63■□□□□ 0.89
ACTN1-220ENST00000556433 DCAF7P61962 342 aa20.63■□□□□ 0.89
ACTN1-220ENST00000556433 MRPS35P82673 323 aaKnown RBP20.63■□□□□ 0.89
ACTN1-220ENST00000556433 CSTF3Q12996 717 aaKnown RBP20.63■□□□□ 0.89
ACTN1-220ENST00000556433 NHSL2Q5HYW2 709 aa20.63■□□□□ 0.89
ACTN1-220ENST00000556433 YRDCQ86U90 279 aaKnown RBP20.63■□□□□ 0.89
ACTN1-220ENST00000556433 NRGNQ92686 78 aa20.63■□□□□ 0.89
ACTN1-220ENST00000556433 ABTB1Q969K4 478 aaPredicted RBP20.63■□□□□ 0.89
ACTN1-220ENST00000556433 LRRC46Q96FV0 321 aa20.63■□□□□ 0.89
ACTN1-220ENST00000556433 WDYHV1Q96HA8 205 aa20.63■□□□□ 0.89
ACTN1-220ENST00000556433 TMEM237Q96Q45 408 aa20.63■□□□□ 0.89
ACTN1-220ENST00000556433 ZNF382Q96SR6 550 aa20.63■□□□□ 0.89
ACTN1-220ENST00000556433 DNAJB12Q9NXW2 375 aaKnown RBP20.63■□□□□ 0.89
ACTN1-220ENST00000556433 EHD3Q9NZN3 535 aa20.63■□□□□ 0.89
ACTN1-220ENST00000556433 DLGAP4Q9Y2H0 992 aa20.63■□□□□ 0.89
ACTN1-220ENST00000556433 ICOSLGO75144 302 aa20.62■□□□□ 0.89
ACTN1-220ENST00000556433 UGT2B11O75310 529 aa20.62■□□□□ 0.89
ACTN1-220ENST00000556433 NSUN5P2Q63ZY6 315 aa20.62■□□□□ 0.89
ACTN1-220ENST00000556433 TMEM81Q6P7N7 255 aa20.62■□□□□ 0.89
ACTN1-220ENST00000556433 TRMT10CQ7L0Y3 403 aaKnown RBP20.62■□□□□ 0.89
ACTN1-220ENST00000556433 LCA5Q86VQ0 697 aa20.62■□□□□ 0.89
ACTN1-220ENST00000556433 FAM83FQ8NEG4 500 aaPredicted RBP20.62■□□□□ 0.89
ACTN1-220ENST00000556433 TRIB1Q96RU8 372 aa20.62■□□□□ 0.89
ACTN1-220ENST00000556433 OSBPL11Q9BXB4 747 aa20.62■□□□□ 0.89
ACTN1-220ENST00000556433 GALNT9Q9HCQ5 603 aa20.62■□□□□ 0.89
ACTN1-220ENST00000556433 KLRF1Q9NZS2 232 aa20.62■□□□□ 0.89
ACTN1-220ENST00000556433 ZNF629Q9UEG4 869 aaPredicted RBP20.62■□□□□ 0.89
ACTN1-220ENST00000556433 FETUBQ9UGM5 382 aa20.62■□□□□ 0.89
ACTN1-220ENST00000556433 ARHGAP21Q5T5U3 1957 aa20.62■□□□□ 0.89
ACTN1-220ENST00000556433 SNPHO15079 494 aa20.61■□□□□ 0.89
ACTN1-220ENST00000556433 TO15178 435 aa20.61■□□□□ 0.89
ACTN1-220ENST00000556433 PCDH7O60245 1069 aa20.61■□□□□ 0.89
ACTN1-220ENST00000556433 CTAG2O75638 210 aa20.61■□□□□ 0.89
ACTN1-220ENST00000556433 BCAS2O75934 225 aaPredicted RBP20.61■□□□□ 0.89
ACTN1-220ENST00000556433 IL3P08700 152 aa20.61■□□□□ 0.89
ACTN1-220ENST00000556433 DRD2P14416 443 aa20.61■□□□□ 0.89
ACTN1-220ENST00000556433 DNAJA1P31689 397 aaKnown RBP20.61■□□□□ 0.89
ACTN1-220ENST00000556433 PEX19P40855 299 aa20.61■□□□□ 0.89
ACTN1-220ENST00000556433 PTGDSP41222 190 aa20.61■□□□□ 0.89
ACTN1-220ENST00000556433 ASCL1P50553 236 aa20.61■□□□□ 0.89
ACTN1-220ENST00000556433 PRKAA2P54646 552 aa20.61■□□□□ 0.89
ACTN1-220ENST00000556433 NAGLUP54802 743 aa20.61■□□□□ 0.89
ACTN1-220ENST00000556433 RAE1P78406 368 aaKnown RBP20.61■□□□□ 0.89
ACTN1-220ENST00000556433 SNTA1Q13424 505 aa20.61■□□□□ 0.89
ACTN1-220ENST00000556433 ZNF628Q5EBL2 1059 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms