RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 MAPK1P28482 360 aa8.91□□□□□ -0.98
SRP54-210ENST00000556380 SOX3P41225 446 aa8.91□□□□□ -0.98
SRP54-210ENST00000556380 DIO3P55073 304 aa8.91□□□□□ -0.98
SRP54-210ENST00000556380 CLDN8P56748 225 aa8.91□□□□□ -0.98
SRP54-210ENST00000556380 OC90Q02509 493 aaPredicted RBP8.91□□□□□ -0.98
SRP54-210ENST00000556380 INAQ16352 499 aa8.91□□□□□ -0.98
SRP54-210ENST00000556380 OGFOD2Q6N063 350 aa8.91□□□□□ -0.98
SRP54-210ENST00000556380 SLC29A4Q7RTT9 530 aa8.91□□□□□ -0.98
SRP54-210ENST00000556380 TMEM156Q8N614 296 aa8.91□□□□□ -0.98
SRP54-210ENST00000556380 HORMAD2Q8N7B1 307 aa8.91□□□□□ -0.98
SRP54-210ENST00000556380 GOLGA6L1Q8N7Z2 621 aa8.91□□□□□ -0.98
SRP54-210ENST00000556380 FNDC5Q8NAU1 212 aa8.91□□□□□ -0.98
SRP54-210ENST00000556380 C17orf47Q8NEP4 570 aa8.91□□□□□ -0.98
SRP54-210ENST00000556380 OR7G2Q8NG99 324 aa8.91□□□□□ -0.98
SRP54-210ENST00000556380 OR52R1Q8NGF1 315 aa8.91□□□□□ -0.98
SRP54-210ENST00000556380 GRHL3Q8TE85 626 aa8.91□□□□□ -0.98
SRP54-210ENST00000556380 CIDECQ96AQ7 238 aaPredicted RBP8.91□□□□□ -0.98
SRP54-210ENST00000556380 NTNG2Q96CW9 530 aa8.91□□□□□ -0.98
SRP54-210ENST00000556380 COQ8BQ96D53 544 aa8.91□□□□□ -0.98
SRP54-210ENST00000556380 MAELQ96JY0 434 aaKnown RBP8.91□□□□□ -0.98
SRP54-210ENST00000556380 SGCZQ96LD1 299 aa8.91□□□□□ -0.98
SRP54-210ENST00000556380 PPP1R36Q96LQ0 422 aa8.91□□□□□ -0.98
SRP54-210ENST00000556380 C7orf26Q96N11 449 aa8.91□□□□□ -0.98
SRP54-210ENST00000556380 TRIM4Q9C037 500 aa8.91□□□□□ -0.98
SRP54-210ENST00000556380 BRINP2Q9C0B6 783 aa8.91□□□□□ -0.98
SRP54-210ENST00000556380 ACBD3Q9H3P7 528 aa8.91□□□□□ -0.98
SRP54-210ENST00000556380 ANKRA2Q9H9E1 313 aa8.91□□□□□ -0.98
SRP54-210ENST00000556380 SLCO1B3Q9NPD5 702 aa8.91□□□□□ -0.98
SRP54-210ENST00000556380 MIEF1Q9NQG6 463 aa8.91□□□□□ -0.98
SRP54-210ENST00000556380 GIMAP4Q9NUV9 329 aa8.91□□□□□ -0.98
SRP54-210ENST00000556380 NTMQ9P121 344 aa8.91□□□□□ -0.98
SRP54-210ENST00000556380 ENTPD4Q9Y227 616 aa8.91□□□□□ -0.98
SRP54-210ENST00000556380 EIF3LQ9Y262 564 aaKnown RBP8.91□□□□□ -0.98
SRP54-210ENST00000556380 COPG1Q9Y678 874 aaKnown RBP8.91□□□□□ -0.98
SRP54-210ENST00000556380 CROCCQ5TZA2 2017 aa8.91□□□□□ -0.98
SRP54-210ENST00000556380 USP9YO00507 2555 aaPredicted RBP8.91□□□□□ -0.98
SRP54-210ENST00000556380 HIVEP3Q5T1R4 2406 aa8.91□□□□□ -0.98
SRP54-210ENST00000556380 SPTAN1Q13813 2472 aaKnown RBP8.9□□□□□ -0.98
SRP54-210ENST00000556380 C2orf92A0A1B0GVN3 265 aa8.9□□□□□ -0.98
SRP54-210ENST00000556380 SLCO1B7G3V0H7 640 aa8.9□□□□□ -0.98
SRP54-210ENST00000556380 PYCARD-AS1I3L0S3 204 aa8.9□□□□□ -0.98
SRP54-210ENST00000556380 SCAMP2O15127 329 aaKnown RBP8.9□□□□□ -0.98
SRP54-210ENST00000556380 TO15178 435 aa8.9□□□□□ -0.98
SRP54-210ENST00000556380 PDPK1O15530 556 aa8.9□□□□□ -0.98
SRP54-210ENST00000556380 VPS4BO75351 444 aa8.9□□□□□ -0.98
SRP54-210ENST00000556380 NME6O75414 186 aaPredicted RBP8.9□□□□□ -0.98
SRP54-210ENST00000556380 SLC25A12O75746 678 aa8.9□□□□□ -0.98
SRP54-210ENST00000556380 BCAS2O75934 225 aaPredicted RBP8.9□□□□□ -0.98
SRP54-210ENST00000556380 WISP2O76076 250 aa8.9□□□□□ -0.98
SRP54-210ENST00000556380 SLITRK5O94991 958 aa8.9□□□□□ -0.98
SRP54-210ENST00000556380 PSMG1O95456 288 aa8.9□□□□□ -0.98
SRP54-210ENST00000556380 ALDOCP09972 364 aaKnown RBP8.9□□□□□ -0.98
SRP54-210ENST00000556380 CT45A8P0DMV1 189 aa8.9□□□□□ -0.98
SRP54-210ENST00000556380 CT45A9P0DMV2 189 aa8.9□□□□□ -0.98
SRP54-210ENST00000556380 LBPP18428 481 aa8.9□□□□□ -0.98
SRP54-210ENST00000556380 PRPS1L1P21108 318 aa8.9□□□□□ -0.98
SRP54-210ENST00000556380 DRD5P21918 477 aa8.9□□□□□ -0.98
SRP54-210ENST00000556380 PPICP45877 212 aa8.9□□□□□ -0.98
SRP54-210ENST00000556380 NCBP2P52298 156 aaKnown RBP eCLIP8.9□□□□□ -0.98
SRP54-210ENST00000556380 MAD2L1Q13257 205 aaPredicted RBP8.9□□□□□ -0.98
SRP54-210ENST00000556380 MLC1Q15049 377 aa8.9□□□□□ -0.98
SRP54-210ENST00000556380 CT45A2Q5DJT8 189 aa8.9□□□□□ -0.98
SRP54-210ENST00000556380 OPN5Q6U736 354 aa8.9□□□□□ -0.98
SRP54-210ENST00000556380 IL20RBQ6UXL0 311 aa8.9□□□□□ -0.98
SRP54-210ENST00000556380 RGS9BPQ6ZS82 235 aa8.9□□□□□ -0.98
SRP54-210ENST00000556380 ZNF551Q7Z340 670 aaPredicted RBP8.9□□□□□ -0.98
SRP54-210ENST00000556380 GALNTL5Q7Z4T8 443 aa8.9□□□□□ -0.98
SRP54-210ENST00000556380 R3HCC1LQ7Z5L2 792 aaKnown RBP8.9□□□□□ -0.98
SRP54-210ENST00000556380 CAMKMTQ7Z624 323 aa8.9□□□□□ -0.98
SRP54-210ENST00000556380 FAM9CQ8IZT9 166 aa8.9□□□□□ -0.98
SRP54-210ENST00000556380 CYP4Z2PQ8N1L4 340 aa8.9□□□□□ -0.98
SRP54-210ENST00000556380 OR2L13Q8N349 312 aa8.9□□□□□ -0.98
SRP54-210ENST00000556380 KRTCAP2Q8N6L1 136 aa8.9□□□□□ -0.98
SRP54-210ENST00000556380 OR7A2PQ8NGA2 310 aa8.9□□□□□ -0.98
SRP54-210ENST00000556380 DNAJB8Q8NHS0 232 aa8.9□□□□□ -0.98
SRP54-210ENST00000556380 PIWIL2Q8TC59 973 aaKnown RBP8.9□□□□□ -0.98
SRP54-210ENST00000556380 FAR1Q8WVX9 515 aa8.9□□□□□ -0.98
SRP54-210ENST00000556380 CKAP2Q8WWK9 683 aa8.9□□□□□ -0.98
SRP54-210ENST00000556380 ASB15Q8WXK1 588 aa8.9□□□□□ -0.98
SRP54-210ENST00000556380 PPCDCQ96CD2 204 aa8.9□□□□□ -0.98
SRP54-210ENST00000556380 ELP4Q96EB1 424 aa8.9□□□□□ -0.98
SRP54-210ENST00000556380 VSTM2LQ96N03 204 aa8.9□□□□□ -0.98
SRP54-210ENST00000556380 GAL3ST4Q96RP7 486 aa8.9□□□□□ -0.98
SRP54-210ENST00000556380 NXF5Q9H1B4 397 aaKnown RBP8.9□□□□□ -0.98
SRP54-210ENST00000556380 WDR55Q9H6Y2 383 aaPredicted RBP8.9□□□□□ -0.98
SRP54-210ENST00000556380 PROK2Q9HC23 129 aa8.9□□□□□ -0.98
SRP54-210ENST00000556380 KLHL1Q9NR64 748 aa8.9□□□□□ -0.98
SRP54-210ENST00000556380 ACSS1Q9NUB1 689 aaPredicted RBP8.9□□□□□ -0.98
SRP54-210ENST00000556380 INTS9Q9NV88 658 aaKnown RBP8.9□□□□□ -0.98
SRP54-210ENST00000556380 NOP53Q9NZM5 478 aaKnown RBP8.9□□□□□ -0.98
SRP54-210ENST00000556380 SH3BP4Q9P0V3 963 aa8.9□□□□□ -0.98
SRP54-210ENST00000556380 MARCOQ9UEW3 520 aaPredicted RBP8.9□□□□□ -0.98
SRP54-210ENST00000556380 C19orf53Q9UNZ5 99 aaPredicted RBP8.9□□□□□ -0.98
SRP54-210ENST00000556380 GPR55Q9Y2T6 319 aaPredicted RBP8.9□□□□□ -0.98
SRP54-210ENST00000556380 A8MVJ9 347 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 TCP11X1B4DZS4 312 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 UPK1AO00322 258 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 ATP8B1O43520 1251 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 RASAL1O95294 804 aa8.89□□□□□ -0.99
SRP54-210ENST00000556380 WISP1O95388 367 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms