RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 ITPAQ9BY32 194 aa17.18■□□□□ 0.34
CDKN3-209ENST00000556102 LIME1Q9H400 295 aa17.18■□□□□ 0.34
CDKN3-209ENST00000556102 BRF2Q9HAW0 419 aa17.18■□□□□ 0.34
CDKN3-209ENST00000556102 FARSBQ9NSD9 589 aaKnown RBP17.18■□□□□ 0.34
CDKN3-209ENST00000556102 ZNF639Q9UID6 485 aa17.18■□□□□ 0.34
CDKN3-209ENST00000556102 CBLCQ9ULV8 474 aa17.18■□□□□ 0.34
CDKN3-209ENST00000556102 EDARQ9UNE0 448 aa17.18■□□□□ 0.34
CDKN3-209ENST00000556102 ZNF469Q96JG9 3925 aaPredicted RBP17.17■□□□□ 0.34
CDKN3-209ENST00000556102 ACANP16112 2415 aa17.17■□□□□ 0.34
CDKN3-209ENST00000556102 A0A1B0GTL3 188 aa17.17■□□□□ 0.34
CDKN3-209ENST00000556102 SNPHO15079 494 aa17.17■□□□□ 0.34
CDKN3-209ENST00000556102 ACOX3O15254 700 aa17.17■□□□□ 0.34
CDKN3-209ENST00000556102 KRT38O76015 456 aa17.17■□□□□ 0.34
CDKN3-209ENST00000556102 PDYNP01213 254 aa17.17■□□□□ 0.34
CDKN3-209ENST00000556102 RHOXF2BP0C7M4 288 aa17.17■□□□□ 0.34
CDKN3-209ENST00000556102 CSNK2A2P19784 350 aaPredicted RBP17.17■□□□□ 0.34
CDKN3-209ENST00000556102 DNASE1P24855 282 aa17.17■□□□□ 0.34
CDKN3-209ENST00000556102 TACR1P25103 407 aa17.17■□□□□ 0.34
CDKN3-209ENST00000556102 FEN1P39748 380 aaKnown RBP17.17■□□□□ 0.34
CDKN3-209ENST00000556102 PLCXD2Q0VAA5 305 aa17.17■□□□□ 0.34
CDKN3-209ENST00000556102 EXOSC7Q15024 291 aaKnown RBP17.17■□□□□ 0.34
CDKN3-209ENST00000556102 DAZAP2Q15038 168 aaPredicted RBP17.17■□□□□ 0.34
CDKN3-209ENST00000556102 LETMD1Q6P1Q0 360 aa17.17■□□□□ 0.34
CDKN3-209ENST00000556102 RPS27LQ71UM5 84 aaKnown RBP17.17■□□□□ 0.34
CDKN3-209ENST00000556102 YRDCQ86U90 279 aaKnown RBP17.17■□□□□ 0.34
CDKN3-209ENST00000556102 CDC20BQ86Y33 519 aa17.17■□□□□ 0.34
CDKN3-209ENST00000556102 KIF18BQ86Y91 864 aa17.17■□□□□ 0.34
CDKN3-209ENST00000556102 TGIF2LYQ8IUE0 185 aa17.17■□□□□ 0.34
CDKN3-209ENST00000556102 ZNF483Q8TF39 744 aaPredicted RBP17.17■□□□□ 0.34
CDKN3-209ENST00000556102 SELENOMQ8WWX9 145 aa17.17■□□□□ 0.34
CDKN3-209ENST00000556102 TM4SF18Q96CE8 201 aa17.17■□□□□ 0.34
CDKN3-209ENST00000556102 CTHRC1Q96CG8 243 aa17.17■□□□□ 0.34
CDKN3-209ENST00000556102 KLHL29Q96CT2 875 aa17.17■□□□□ 0.34
CDKN3-209ENST00000556102 OMA1Q96E52 524 aa17.17■□□□□ 0.34
CDKN3-209ENST00000556102 NODALQ96S42 347 aa17.17■□□□□ 0.34
CDKN3-209ENST00000556102 PAFAH2Q99487 392 aa17.17■□□□□ 0.34
CDKN3-209ENST00000556102 MRPL57Q9BQC6 102 aaKnown RBP17.17■□□□□ 0.34
CDKN3-209ENST00000556102 OSBPL11Q9BXB4 747 aa17.17■□□□□ 0.34
CDKN3-209ENST00000556102 MRPL46Q9H2W6 279 aaKnown RBP17.17■□□□□ 0.34
CDKN3-209ENST00000556102 CDC42EP4Q9H3Q1 356 aaKnown RBP17.17■□□□□ 0.34
CDKN3-209ENST00000556102 CALHM2Q9HA72 323 aa17.17■□□□□ 0.34
CDKN3-209ENST00000556102 PSME2Q9UL46 239 aa17.17■□□□□ 0.34
CDKN3-209ENST00000556102 SNX6Q9UNH7 406 aa17.17■□□□□ 0.34
CDKN3-209ENST00000556102 CBX7O95931 251 aa17.16■□□□□ 0.34
CDKN3-209ENST00000556102 IL18BPO95998 194 aa17.16■□□□□ 0.34
CDKN3-209ENST00000556102 ACTL6AO96019 429 aa17.16■□□□□ 0.34
CDKN3-209ENST00000556102 CTSSP25774 331 aa17.16■□□□□ 0.34
CDKN3-209ENST00000556102 OPRM1P35372 400 aa17.16■□□□□ 0.34
CDKN3-209ENST00000556102 GCKP35557 465 aa17.16■□□□□ 0.34
CDKN3-209ENST00000556102 SOX18P35713 384 aa17.16■□□□□ 0.34
CDKN3-209ENST00000556102 PTGDSP41222 190 aa17.16■□□□□ 0.34
CDKN3-209ENST00000556102 NAGLUP54802 743 aa17.16■□□□□ 0.34
CDKN3-209ENST00000556102 SNTA1Q13424 505 aa17.16■□□□□ 0.34
CDKN3-209ENST00000556102 RCAN2Q14206 197 aa17.16■□□□□ 0.34
CDKN3-209ENST00000556102 CEBPEQ15744 281 aa17.16■□□□□ 0.34
CDKN3-209ENST00000556102 DESI1Q6ICB0 168 aa17.16■□□□□ 0.34
CDKN3-209ENST00000556102 ADCY4Q8NFM4 1077 aa17.16■□□□□ 0.34
CDKN3-209ENST00000556102 FAIM2Q9BWQ8 316 aa17.16■□□□□ 0.34
CDKN3-209ENST00000556102 TSPYL1Q9H0U9 437 aa17.16■□□□□ 0.34
CDKN3-209ENST00000556102 EPB41L4BQ9H329 900 aa17.16■□□□□ 0.34
CDKN3-209ENST00000556102 NMRK1Q9NWW6 199 aa17.16■□□□□ 0.34
CDKN3-209ENST00000556102 PRODH2Q9UF12 536 aa17.16■□□□□ 0.34
CDKN3-209ENST00000556102 TRPS1Q9UHF7 1281 aa17.16■□□□□ 0.34
CDKN3-209ENST00000556102 PLEKHA6Q9Y2H5 1048 aa17.16■□□□□ 0.34
CDKN3-209ENST00000556102 PLLPQ9Y342 182 aa17.16■□□□□ 0.34
CDKN3-209ENST00000556102 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.16■□□□□ 0.34
CDKN3-209ENST00000556102 A8MT66 165 aa17.15■□□□□ 0.34
CDKN3-209ENST00000556102 PPP6CO00743 305 aa17.15■□□□□ 0.34
CDKN3-209ENST00000556102 DIAPH2O60879 1101 aa17.15■□□□□ 0.34
CDKN3-209ENST00000556102 ICOSLGO75144 302 aa17.15■□□□□ 0.34
CDKN3-209ENST00000556102 CNTFP26441 200 aa17.15■□□□□ 0.34
CDKN3-209ENST00000556102 PPICP45877 212 aa17.15■□□□□ 0.34
CDKN3-209ENST00000556102 CDH13P55290 713 aa17.15■□□□□ 0.34
CDKN3-209ENST00000556102 DCAF7P61962 342 aa17.15■□□□□ 0.34
CDKN3-209ENST00000556102 TRA2BP62995 288 aaKnown RBP17.15■□□□□ 0.34
CDKN3-209ENST00000556102 SORDQ00796 357 aa17.15■□□□□ 0.34
CDKN3-209ENST00000556102 DUSP2Q05923 314 aa17.15■□□□□ 0.34
CDKN3-209ENST00000556102 KRTAP21-3Q3LHN1 58 aa17.15■□□□□ 0.34
CDKN3-209ENST00000556102 SIMC1Q8NDZ2 872 aa17.15■□□□□ 0.34
CDKN3-209ENST00000556102 OR52R1Q8NGF1 315 aa17.15■□□□□ 0.34
CDKN3-209ENST00000556102 ZPLD1Q8TCW7 415 aa17.15■□□□□ 0.34
CDKN3-209ENST00000556102 CNRIP1Q96F85 164 aaPredicted RBP17.15■□□□□ 0.34
CDKN3-209ENST00000556102 C1QTNF3Q9BXJ4 246 aa17.15■□□□□ 0.34
CDKN3-209ENST00000556102 GALNT9Q9HCQ5 603 aa17.15■□□□□ 0.34
CDKN3-209ENST00000556102 KLRF1Q9NZS2 232 aa17.15■□□□□ 0.34
CDKN3-209ENST00000556102 ZNF180Q9UJW8 692 aa17.15■□□□□ 0.34
CDKN3-209ENST00000556102 MAPRE3Q9UPY8 281 aa17.15■□□□□ 0.34
CDKN3-209ENST00000556102 EXO1Q9UQ84 846 aaKnown RBP17.15■□□□□ 0.34
CDKN3-209ENST00000556102 ZNF780BQ9Y6R6 833 aa17.15■□□□□ 0.34
CDKN3-209ENST00000556102 MED12LQ86YW9 2145 aa17.14■□□□□ 0.33
CDKN3-209ENST00000556102 PRAMEF25A6NGN4 478 aa17.14■□□□□ 0.33
CDKN3-209ENST00000556102 TUBAL3A6NHL2 446 aa17.14■□□□□ 0.33
CDKN3-209ENST00000556102 TRIM49D1C9J1S8 452 aa17.14■□□□□ 0.33
CDKN3-209ENST00000556102 EEF1E1-BLOC1S5C9J1V9 151 aa17.14■□□□□ 0.33
CDKN3-209ENST00000556102 TO15178 435 aa17.14■□□□□ 0.33
CDKN3-209ENST00000556102 EEF1E1O43324 174 aaKnown RBP17.14■□□□□ 0.33
CDKN3-209ENST00000556102 UGT2B11O75310 529 aa17.14■□□□□ 0.33
CDKN3-209ENST00000556102 EPXP11678 715 aa17.14■□□□□ 0.33
CDKN3-209ENST00000556102 CYP4B1P13584 511 aa17.14■□□□□ 0.33
CDKN3-209ENST00000556102 CPN1P15169 458 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms