RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 C17orf47Q8NEP4 570 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 NUP43Q8NFH3 380 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 FDCSPQ8NFU4 85 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 OR7G2Q8NG99 324 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 GOT1L1Q8NHS2 421 aaPredicted RBP7.09□□□□□ -1.27
TDP1-214ENST00000556063 C16orf52Q8NHV5 167 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 RP9Q8TA86 221 aaKnown RBP7.09□□□□□ -1.27
TDP1-214ENST00000556063 DOK4Q8TEW6 326 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 EXTL1Q92935 676 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 TP53INP1Q96A56 240 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 VPS33AQ96AX1 596 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 CMTM5Q96DZ9 223 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 WWTR1Q9GZV5 400 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 RAD21L1Q9H4I0 556 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 CDCP1Q9H5V8 836 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 ZNF385DQ9H6B1 395 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 STMN3Q9NZ72 180 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 NTMQ9P121 344 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 MYOTQ9UBF9 498 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 MRTO4Q9UKD2 239 aaKnown RBP7.09□□□□□ -1.27
TDP1-214ENST00000556063 YARS2Q9Y2Z4 477 aaKnown RBP7.09□□□□□ -1.27
TDP1-214ENST00000556063 ZNF451Q9Y4E5 1061 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 PCDHGB3Q9Y5G1 929 aa7.09□□□□□ -1.27
TDP1-214ENST00000556063 HEMK1Q9Y5R4 338 aaPredicted RBP7.09□□□□□ -1.27
TDP1-214ENST00000556063 A0A096LPI6 279 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 RNF103-CHMP3A0A140T963 221 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 DUXAA6NLW8 204 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 ERVH48-1M5A8F1 160 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 MASP2O00187 686 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 HRKO00198 91 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 ACOX3O15254 700 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 SCN2BO60939 215 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 DNAJB5O75953 348 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 KCNH1O95259 989 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 AGR2O95994 175 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 NPPAP01160 153 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 CELA2AP08217 269 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 ALOX5P09917 674 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 CAPN3P20807 821 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 DRD5P21918 477 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 PPIBP23284 216 aaKnown RBP7.08□□□□□ -1.28
TDP1-214ENST00000556063 PRDX6P30041 224 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 PTGER1P34995 402 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 CHI3L1P36222 383 aaPredicted RBP7.08□□□□□ -1.28
TDP1-214ENST00000556063 PPICP45877 212 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 TMED10P49755 219 aaKnown RBP7.08□□□□□ -1.28
TDP1-214ENST00000556063 SSR4P51571 173 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 NR0B1P51843 470 aaKnown RBP7.08□□□□□ -1.28
TDP1-214ENST00000556063 PSMD4P55036 377 aaKnown RBP7.08□□□□□ -1.28
TDP1-214ENST00000556063 MLF1P58340 268 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 RPP38P78345 283 aaKnown RBP7.08□□□□□ -1.28
TDP1-214ENST00000556063 MRPS22P82650 360 aaKnown RBP7.08□□□□□ -1.28
TDP1-214ENST00000556063 OC90Q02509 493 aaPredicted RBP7.08□□□□□ -1.28
TDP1-214ENST00000556063 KCNAB2Q13303 367 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 EBPQ15125 230 aaKnown RBP7.08□□□□□ -1.28
TDP1-214ENST00000556063 COQ5Q5HYK3 327 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 FHL5Q5TD97 284 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 TCTN3Q6NUS6 607 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 OPN5Q6U736 354 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 ANGPTL8Q6UXH0 198 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 GK5Q6ZS86 529 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 C9orf40Q8IXQ3 194 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 GPALPP1Q8IXQ4 340 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 ARMC10Q8N2F6 343 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 ZADH2Q8N4Q0 377 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 ZNF321PQ8N8H1 164 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 C9orf43Q8TAL5 461 aaPredicted RBP7.08□□□□□ -1.28
TDP1-214ENST00000556063 ADAMTS15Q8TE58 950 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 THAP3Q8WTV1 239 aaPredicted RBP7.08□□□□□ -1.28
TDP1-214ENST00000556063 NUDT8Q8WV74 236 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 ASB15Q8WXK1 588 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 PSMF1Q92530 271 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 JADE3Q92613 823 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 FAM120BQ96EK7 910 aaKnown RBP7.08□□□□□ -1.28
TDP1-214ENST00000556063 HSPBAP1Q96EW2 488 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 WBP1Q96G27 269 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 LCORQ96JN0 433 aaPredicted RBP7.08□□□□□ -1.28
TDP1-214ENST00000556063 SMAD5Q99717 465 aaKnown RBP7.08□□□□□ -1.28
TDP1-214ENST00000556063 UTP23Q9BRU9 249 aaKnown RBP7.08□□□□□ -1.28
TDP1-214ENST00000556063 SLC35A5Q9BS91 424 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 ACTRT3Q9BYD9 372 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 RNF32Q9H0A6 362 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 OCEL1Q9H607 264 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 ZNF552Q9H707 407 aaPredicted RBP7.08□□□□□ -1.28
TDP1-214ENST00000556063 CXorf36Q9H7Y0 433 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 FOLH1BQ9HBA9 442 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 Q9N2J8 555 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 SIRT3Q9NTG7 399 aaPredicted RBP7.08□□□□□ -1.28
TDP1-214ENST00000556063 GID8Q9NWU2 228 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 ARMCX1Q9P291 453 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 ZNF223Q9UK11 482 aaPredicted RBP7.08□□□□□ -1.28
TDP1-214ENST00000556063 OR10H1Q9Y4A9 318 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 SPEGQ15772 3267 aa7.08□□□□□ -1.28
TDP1-214ENST00000556063 LOC100653049A0A140TA62 436 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 FRG2CA6NGY1 282 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 A8MVJ9 347 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 EVPLLA8MZ36 301 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 WWP2O00308 870 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 HS6ST1O60243 411 aa7.07□□□□□ -1.28
TDP1-214ENST00000556063 DPM1O60762 260 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms