RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	C6	P13671	934 aa		11.68	□□□□□ -0.54
TMPO-212	ENST00000556029	GRK6	P43250	576 aa		11.68	□□□□□ -0.54
TMPO-212	ENST00000556029	RPS13	P62277	151 aa	Known RBP	11.68	□□□□□ -0.54
TMPO-212	ENST00000556029	BTBD16	Q32M84	506 aa		11.68	□□□□□ -0.54
TMPO-212	ENST00000556029	ITPRIPL2	Q3MIP1	535 aa		11.68	□□□□□ -0.54
TMPO-212	ENST00000556029	PRAMEF17	Q5VTA0	474 aa		11.68	□□□□□ -0.54
TMPO-212	ENST00000556029	TMEM53	Q6P2H8	277 aa		11.68	□□□□□ -0.54
TMPO-212	ENST00000556029	LRRTM4	Q86VH4	590 aa		11.68	□□□□□ -0.54
TMPO-212	ENST00000556029	NPAS3	Q8IXF0	933 aa		11.68	□□□□□ -0.54
TMPO-212	ENST00000556029	PIAS4	Q8N2W9	510 aa	Predicted RBP	11.68	□□□□□ -0.54
TMPO-212	ENST00000556029	OR6C4	Q8NGE1	309 aa		11.68	□□□□□ -0.54
TMPO-212	ENST00000556029	OR51A7	Q8NH64	312 aa		11.68	□□□□□ -0.54
TMPO-212	ENST00000556029	C17orf50	Q8WW18	174 aa		11.68	□□□□□ -0.54
TMPO-212	ENST00000556029	ALG14	Q96F25	216 aa		11.68	□□□□□ -0.54
TMPO-212	ENST00000556029	FEV	Q99581	238 aa		11.68	□□□□□ -0.54
TMPO-212	ENST00000556029	NAALAD2	Q9Y3Q0	740 aa		11.68	□□□□□ -0.54
TMPO-212	ENST00000556029	BPTF	Q12830	3046 aa		11.68	□□□□□ -0.54
TMPO-212	ENST00000556029	ABCA1	O95477	2261 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	ZNF860	A6NHJ4	632 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029		L7N2F9	121 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	GPX2	P18283	190 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	C21orf33	P30042	268 aa	Predicted RBP	11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	CSNK1D	P48730	415 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	B4GALNT1	Q00973	533 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	RUNX3	Q13761	415 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	LRRC32	Q14392	662 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	ELAVL3	Q14576	367 aa	Known RBP	11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	IER5L	Q5T953	404 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	SLC25A25	Q6KCM7	469 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	RNF130	Q86XS8	419 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	DOHH	Q9BU89	302 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	ZBTB20	Q9HC78	741 aa	Predicted RBP	11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	ENAM	Q9NRM1	1142 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	GSKIP	Q9P0R6	139 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	KLHL42	Q9P2K6	505 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	TANC1	Q9C0D5	1861 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	INMT-MINDY4	F8WBC2	141 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	BLOC1S5-TXNDC5	H3BN57	136 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	PCDHGA12	O60330	932 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	ARHGDIB	P52566	201 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	ILF3	Q12906	894 aa	Known RBP eCLIP	11.67	□□□□□ -0.54	2e-8	■□□□□ 9.1
TMPO-212	ENST00000556029	PRAMEF14	Q5SWL7	426 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	PRAMEF13	Q5VWM6	474 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	ZNF551	Q7Z340	670 aa	Predicted RBP	11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	SAMD12	Q8N8I0	201 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	SRFBP1	Q8NEF9	429 aa	Known RBP	11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	SETD6	Q8TBK2	473 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	SPPL3	Q8TCT6	385 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	DNAJA4	Q8WW22	397 aa	Predicted RBP	11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	OTUB2	Q96DC9	234 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	HDHD5	Q9BXW7	423 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	ZNF717	Q9BY31	904 aa	Predicted RBP	11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	ZBP1	Q9H171	429 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	RC3H2	Q9HBD1	1191 aa	Known RBP	11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	WBP1L	Q9NX94	342 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	NUP214	P35658	2090 aa	Predicted RBP	11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	CACNA1D	Q01668	2161 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	FAM170B	A6NMN3	283 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029		H7BY64	318 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	SCAMP2	O15127	329 aa	Known RBP	11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	SLC16A5	O15375	505 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	SLC6A12	P48065	614 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	MAB21L1	Q13394	359 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	VEZF1	Q14119	521 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	KLHL26	Q53HC5	615 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	PTOV1	Q86YD1	416 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	ELMOD2	Q8IZ81	293 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	NAGS	Q8N159	534 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	COQ8A	Q8NI60	647 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	DYNC2LI1	Q8TCX1	351 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	PRAP1	Q96NZ9	151 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	ZNF300	Q96RE9	604 aa	Predicted RBP	11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	MCCC1	Q96RQ3	725 aa	Predicted RBP	11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	OR2S2	Q9NQN1	319 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	ZFR2	Q9UPR6	939 aa	Known RBP	11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	PLEKHA6	Q9Y2H5	1048 aa		11.67	□□□□□ -0.54
TMPO-212	ENST00000556029	ZDBF2	Q9HCK1	2354 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	KHNYN	O15037	678 aa	Known RBP	11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	SERPINA3	P01011	423 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	PTPN6	P29350	595 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	PPP5C	P53041	499 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	TUBA1B	P68363	451 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	GBX1	Q14549	363 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	NNAT	Q16517	81 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	UBE2U	Q5VVX9	321 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	TUBA1A	Q71U36	451 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	KCTD9	Q7L273	389 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	RANBP3L	Q86VV4	465 aa	Predicted RBP	11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	ENTHD1	Q8IYW4	607 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	OR4E2	Q8NGC2	313 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	OR5T3	Q8NGG3	340 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	OR5M3	Q8NGP4	307 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	DHRS1	Q96LJ7	313 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	PAK6	Q9NQU5	681 aa	Predicted RBP	11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	MED11	Q9P086	117 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	ACSL6	Q9UKU0	697 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	LINC01553	A4QN01	128 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	GABRR3	A8MPY1	467 aa		11.66	□□□□□ -0.54
TMPO-212	ENST00000556029	EIF1AY	O14602	144 aa	Known RBP	11.66	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms