RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 GNRHR2Q96P88 292 aa7.12□□□□□ -1.27
PTCSC3-201ENST00000556013 CDK15Q96Q40 435 aa7.12□□□□□ -1.27
PTCSC3-201ENST00000556013 PAFAH2Q99487 392 aa7.12□□□□□ -1.27
PTCSC3-201ENST00000556013 FMO2Q99518 471 aa7.12□□□□□ -1.27
PTCSC3-201ENST00000556013 STMN4Q9H169 189 aaPredicted RBP7.12□□□□□ -1.27
PTCSC3-201ENST00000556013 CDC42EP4Q9H3Q1 356 aaKnown RBP7.12□□□□□ -1.27
PTCSC3-201ENST00000556013 RASSF1Q9NS23 344 aa7.12□□□□□ -1.27
PTCSC3-201ENST00000556013 ZNF358Q9NW07 568 aa7.12□□□□□ -1.27
PTCSC3-201ENST00000556013 DNAJB12Q9NXW2 375 aaKnown RBP7.12□□□□□ -1.27
PTCSC3-201ENST00000556013 MAT2BQ9NZL9 334 aa7.12□□□□□ -1.27
PTCSC3-201ENST00000556013 JKAMPQ9P055 326 aa7.12□□□□□ -1.27
PTCSC3-201ENST00000556013 MCM8Q9UJA3 840 aa7.12□□□□□ -1.27
PTCSC3-201ENST00000556013 C15orf41Q9Y2V0 281 aa7.12□□□□□ -1.27
PTCSC3-201ENST00000556013 ZNF780BQ9Y6R6 833 aa7.12□□□□□ -1.27
PTCSC3-201ENST00000556013 MPDZO75970 2070 aa7.12□□□□□ -1.27
PTCSC3-201ENST00000556013 ABCA4P78363 2273 aa7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 A0A087WUV0 522 aaPredicted RBP7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 C15orf38-AP3S2A0A0A6YYH1 394 aa7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 ESYT3A0FGR9 886 aa7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 CCDC151A5D8V7 595 aa7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 SNPHO15079 494 aa7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 ICOSLGO75144 302 aa7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 ULK1O75385 1050 aa7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 SLITRK5O94991 958 aa7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 PDYNP01213 254 aa7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 GBAP04062 536 aa7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 ABHD2P08910 425 aa7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 EPXP11678 715 aa7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 BMP7P18075 431 aa7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 IMPDH1P20839 514 aa7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 ARL1P40616 181 aaPredicted RBP7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 EMDP50402 254 aa7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 ART1P52961 327 aa7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 IST1P53990 364 aa7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 MRPS22P82650 360 aaKnown RBP7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 CSTF3Q12996 717 aaKnown RBP7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 GAB1Q13480 694 aa7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 RCAN2Q14206 197 aa7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 HEPACAMQ14CZ8 416 aa7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 RASA2Q15283 850 aa7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 BCL2A1Q16548 175 aa7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 ACSF3Q4G176 576 aaPredicted RBP7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 FLYWCH1Q4VC44 716 aa7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 ENPP6Q6UWR7 440 aa7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 WDR53Q7Z5U6 358 aaPredicted RBP7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 ADGRE4PQ86SQ3 457 aa7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 TMEM200AQ86VY9 491 aa7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 SLC22A9Q8IVM8 553 aa7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 ACMSDQ8TDX5 336 aa7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 DCAKDQ8WVC6 231 aa7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 HGDQ93099 445 aa7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 MBD6Q96DN6 1003 aa7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 SLC35A4Q96G79 324 aa7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 METTL2AQ96IZ6 378 aaKnown RBP7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 ZNF382Q96SR6 550 aa7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 TM9SF2Q99805 663 aa7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 SH3GL2Q99962 352 aa7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 TMUB1Q9BVT8 246 aa7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 UGT2B28Q9BY64 529 aa7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 MRPL1Q9BYD6 325 aaKnown RBP7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 NXF5Q9H1B4 397 aaKnown RBP7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 SLC6A15Q9H2J7 730 aa7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 ACBD3Q9H3P7 528 aa7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 METTL7AQ9H8H3 244 aa7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 TAS2R7Q9NYW3 318 aa7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 EHD3Q9NZN3 535 aa7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 DMGDHQ9UI17 866 aaKnown RBP7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 ZNF225Q9UK10 706 aa7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 SLC12A4Q9UP95 1085 aa7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 GPR55Q9Y2T6 319 aaPredicted RBP7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.11□□□□□ -1.27
PTCSC3-201ENST00000556013 FREM3P0C091 2139 aa7.1□□□□□ -1.27
PTCSC3-201ENST00000556013 FRG2CA6NGY1 282 aa7.1□□□□□ -1.27
PTCSC3-201ENST00000556013 TUBAL3A6NHL2 446 aa7.1□□□□□ -1.27
PTCSC3-201ENST00000556013 TTC36A6NLP5 189 aa7.1□□□□□ -1.27
PTCSC3-201ENST00000556013 A6NNC1 897 aa7.1□□□□□ -1.27
PTCSC3-201ENST00000556013 A8MT66 165 aa7.1□□□□□ -1.27
PTCSC3-201ENST00000556013 TRIM49D1C9J1S8 452 aa7.1□□□□□ -1.27
PTCSC3-201ENST00000556013 LINC01387J3KSC0 135 aa7.1□□□□□ -1.27
PTCSC3-201ENST00000556013 PLOD3O60568 738 aa7.1□□□□□ -1.27
PTCSC3-201ENST00000556013 ERAL1O75616 437 aaKnown RBP7.1□□□□□ -1.27
PTCSC3-201ENST00000556013 URI1O94763 535 aaPredicted RBP7.1□□□□□ -1.27
PTCSC3-201ENST00000556013 SUPT7LO94864 414 aa7.1□□□□□ -1.27
PTCSC3-201ENST00000556013 RCBTB2O95199 551 aa7.1□□□□□ -1.27
PTCSC3-201ENST00000556013 CBX7O95931 251 aa7.1□□□□□ -1.27
PTCSC3-201ENST00000556013 CRHP06850 196 aa7.1□□□□□ -1.27
PTCSC3-201ENST00000556013 GSTA1P08263 222 aa7.1□□□□□ -1.27
PTCSC3-201ENST00000556013 IFI6P09912 130 aa7.1□□□□□ -1.27
PTCSC3-201ENST00000556013 SBK3P0C264 359 aa7.1□□□□□ -1.27
PTCSC3-201ENST00000556013 FOSL1P15407 271 aa7.1□□□□□ -1.27
PTCSC3-201ENST00000556013 ATP5F1P24539 256 aaPredicted RBP7.1□□□□□ -1.27
PTCSC3-201ENST00000556013 SRD5A2P31213 254 aa7.1□□□□□ -1.27
PTCSC3-201ENST00000556013 MPIP34949 423 aa7.1□□□□□ -1.27
PTCSC3-201ENST00000556013 SOX18P35713 384 aa7.1□□□□□ -1.27
PTCSC3-201ENST00000556013 FEN1P39748 380 aaKnown RBP7.1□□□□□ -1.27
PTCSC3-201ENST00000556013 PTGDSP41222 190 aa7.1□□□□□ -1.27
PTCSC3-201ENST00000556013 TRPC1P48995 793 aa7.1□□□□□ -1.27
PTCSC3-201ENST00000556013 ZNF136P52737 540 aa7.1□□□□□ -1.27
PTCSC3-201ENST00000556013 PNLIPRP2P54317 469 aa7.1□□□□□ -1.27
PTCSC3-201ENST00000556013 NAGLUP54802 743 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms