RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 B4GALT2O60909 372 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 SEMA7AO75326 666 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 CYP7B1O75881 506 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 CDRT1O95170 752 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 LGI1O95970 557 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 FHP07954 510 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 HBQ1P09105 142 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 LINC00271P0C7V0 271 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 GPR89BP0CG08 455 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 HNRNPCL4P0DMR1 293 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 EPCAMP16422 314 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 CPEP16870 476 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 S100A1P23297 94 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 MMP11P24347 488 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 BMPR1AP36894 532 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 GIPRP48546 466 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 PRKAG1P54619 331 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 WNT4P56705 351 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 TAS2R41P59536 307 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 CSNK1G2P78368 415 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 PRR5P85299 388 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 CDK3Q00526 305 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 MXD1Q05195 221 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 RAB40BQ12829 278 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 BCL2A1Q16548 175 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 TMEM44Q2T9K0 475 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 ENTPD8Q5MY95 495 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 PDZK1Q5T2W1 519 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 PRPF38BQ5VTL8 546 aaKnown RBP6.6□□□□□ -1.35
TDP1-213ENST00000555880 PRAMEF8Q5VWM4 474 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 PRAMEF7Q5VXH5 474 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 SLC27A4Q6P1M0 643 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 C1orf94Q6P1W5 598 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 TMEM64Q6YI46 380 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 RRM2BQ7LG56 351 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 NRARPQ7Z6K4 114 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 LAX1Q8IWV1 398 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 ETFBKMTQ8IXQ9 262 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 CELF2-AS1Q8N7Q2 184 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 OR4D11Q8NGI4 311 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 TMEM163Q8TC26 289 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 POF1BQ8WVV4 589 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 CAPSLQ8WWF8 208 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 UFD1Q92890 307 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 RFKQ969G6 155 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 SLC35B4Q969S0 331 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 OTUB1Q96FW1 271 aaPredicted RBP6.6□□□□□ -1.35
TDP1-213ENST00000555880 ZNF486Q96H40 463 aaPredicted RBP6.6□□□□□ -1.35
TDP1-213ENST00000555880 ZNF582Q96NG8 517 aaPredicted RBP6.6□□□□□ -1.35
TDP1-213ENST00000555880 OR2A14Q96R47 310 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 FERD3LQ96RJ6 166 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 SDHCQ99643 169 aaPredicted RBP6.6□□□□□ -1.35
TDP1-213ENST00000555880 PINK1Q9BXM7 581 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 BARHL1Q9BZE3 327 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 OR2B2Q9GZK3 357 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 HOXD1Q9GZZ0 328 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 SLC22A4Q9H015 551 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 TMEM245Q9H330 911 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 OSGEPL1Q9H4B0 414 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 GLIPR2Q9H4G4 154 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 SERHL2Q9H4I8 314 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 MVB12BQ9H7P6 319 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 KCNK12Q9HB15 430 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 CACYBPQ9HB71 228 aaKnown RBP6.6□□□□□ -1.35
TDP1-213ENST00000555880 LHX9Q9NQ69 397 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 FBXL12Q9NXK8 326 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 SLC23A2Q9UGH3 650 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 GSTK1Q9Y2Q3 226 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.6□□□□□ -1.35
TDP1-213ENST00000555880 RBMX2Q9Y388 322 aaKnown RBP6.6□□□□□ -1.35
TDP1-213ENST00000555880 EXOSC1Q9Y3B2 195 aaKnown RBP6.6□□□□□ -1.35
TDP1-213ENST00000555880 SPIN1Q9Y657 262 aaPredicted RBP6.6□□□□□ -1.35
TDP1-213ENST00000555880 V9GYH0 126 aa6.6□□□□□ -1.35
TDP1-213ENST00000555880 MUC22E2RYF6 1773 aaPredicted RBP6.59□□□□□ -1.35
TDP1-213ENST00000555880 GOLGA4Q13439 2230 aaKnown RBP6.59□□□□□ -1.35
TDP1-213ENST00000555880 A0A0G2JN53 185 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 TMEM129A0AVI4 362 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 SLC35F4A4IF30 521 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 LRIT2A6NDA9 550 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 TBC1D3BA6NDS4 549 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 CCDC182A6NF36 153 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 H3BQ06 376 aaPredicted RBP6.59□□□□□ -1.35
TDP1-213ENST00000555880 MAN2B1O00754 1011 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 TERTO14746 1132 aaKnown RBP6.59□□□□□ -1.35
TDP1-213ENST00000555880 PRODHO43272 600 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 IDH3BO43837 385 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 TMCC2O75069 709 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 ERAL1O75616 437 aaKnown RBP6.59□□□□□ -1.35
TDP1-213ENST00000555880 PCDH8O95206 1070 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 EPHX1P07099 455 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 ACP2P11117 423 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 IL7P13232 177 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 AZGP1P25311 298 aaKnown RBP6.59□□□□□ -1.35
TDP1-213ENST00000555880 ETV5P41161 510 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 VIPR2P41587 438 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 MTNR1AP48039 350 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 SLC6A11P48066 632 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 SLC9A3P48764 834 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 ETV1P50549 477 aa6.59□□□□□ -1.35
TDP1-213ENST00000555880 RAB28P51157 221 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms