RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 PPM1BO75688 479 aa16.89■□□□□ 0.29
NEDD1-208ENST00000555806 RSL1D1O76021 490 aaKnown RBP16.89■□□□□ 0.29
NEDD1-208ENST00000555806 COX6B1P14854 86 aa16.89■□□□□ 0.29
NEDD1-208ENST00000555806 DCAF7P61962 342 aa16.89■□□□□ 0.29
NEDD1-208ENST00000555806 C2orf80Q0P641 193 aa16.89■□□□□ 0.29
NEDD1-208ENST00000555806 PCLAFQ15004 111 aa16.89■□□□□ 0.29
NEDD1-208ENST00000555806 ERCC6LQ2NKX8 1250 aa16.89■□□□□ 0.29
NEDD1-208ENST00000555806 ZNF628Q5EBL2 1059 aa16.89■□□□□ 0.29
NEDD1-208ENST00000555806 WLSQ5T9L3 541 aa16.89■□□□□ 0.29
NEDD1-208ENST00000555806 CLEC6AQ6EIG7 209 aa16.89■□□□□ 0.29
NEDD1-208ENST00000555806 RND1Q92730 232 aa16.89■□□□□ 0.29
NEDD1-208ENST00000555806 KAT2AQ92830 837 aa16.89■□□□□ 0.29
NEDD1-208ENST00000555806 OMA1Q96E52 524 aa16.89■□□□□ 0.29
NEDD1-208ENST00000555806 HSPBAP1Q96EW2 488 aa16.89■□□□□ 0.29
NEDD1-208ENST00000555806 C11orf24Q96F05 449 aaPredicted RBP16.89■□□□□ 0.29
NEDD1-208ENST00000555806 BBS4Q96RK4 519 aa16.89■□□□□ 0.29
NEDD1-208ENST00000555806 SLC6A15Q9H2J7 730 aa16.89■□□□□ 0.29
NEDD1-208ENST00000555806 METTL7AQ9H8H3 244 aa16.89■□□□□ 0.29
NEDD1-208ENST00000555806 MIEF1Q9NQG6 463 aa16.89■□□□□ 0.29
NEDD1-208ENST00000555806 QPCTLQ9NXS2 382 aa16.89■□□□□ 0.29
NEDD1-208ENST00000555806 EHD3Q9NZN3 535 aa16.89■□□□□ 0.29
NEDD1-208ENST00000555806 FIS1Q9Y3D6 152 aa16.89■□□□□ 0.29
NEDD1-208ENST00000555806 TEX15Q9BXT5 2789 aa16.89■□□□□ 0.29
NEDD1-208ENST00000555806 DNAJC13O75165 2243 aa16.88■□□□□ 0.29
NEDD1-208ENST00000555806 ACOX3O15254 700 aa16.88■□□□□ 0.29
NEDD1-208ENST00000555806 TRIM13O60858 407 aa16.88■□□□□ 0.29
NEDD1-208ENST00000555806 TRIM3O75382 744 aaPredicted RBP16.88■□□□□ 0.29
NEDD1-208ENST00000555806 BCAS2O75934 225 aaPredicted RBP16.88■□□□□ 0.29
NEDD1-208ENST00000555806 SNX4O95219 450 aa16.88■□□□□ 0.29
NEDD1-208ENST00000555806 SLU7O95391 586 aaKnown RBP16.88■□□□□ 0.29
NEDD1-208ENST00000555806 ABCB1P08183 1280 aaPredicted RBP16.88■□□□□ 0.29
NEDD1-208ENST00000555806 DDCP20711 480 aa16.88■□□□□ 0.29
NEDD1-208ENST00000555806 ACVR2AP27037 513 aa16.88■□□□□ 0.29
NEDD1-208ENST00000555806 SOX18P35713 384 aa16.88■□□□□ 0.29
NEDD1-208ENST00000555806 TRPC1P48995 793 aa16.88■□□□□ 0.29
NEDD1-208ENST00000555806 ACAD11Q709F0 780 aa16.88■□□□□ 0.29
NEDD1-208ENST00000555806 TRIM46Q7Z4K8 759 aa16.88■□□□□ 0.29
NEDD1-208ENST00000555806 TRABD2AQ86V40 505 aa16.88■□□□□ 0.29
NEDD1-208ENST00000555806 PACS2Q86VP3 889 aa16.88■□□□□ 0.29
NEDD1-208ENST00000555806 MCEMP1Q8IX19 187 aa16.88■□□□□ 0.29
NEDD1-208ENST00000555806 SRRM1Q8IYB3 904 aaKnown RBP16.88■□□□□ 0.29
NEDD1-208ENST00000555806 FAM9CQ8IZT9 166 aa16.88■□□□□ 0.29
NEDD1-208ENST00000555806 AENQ8WTP8 325 aaKnown RBP16.88■□□□□ 0.29
NEDD1-208ENST00000555806 ASB5Q8WWX0 329 aa16.88■□□□□ 0.29
NEDD1-208ENST00000555806 GATA5Q9BWX5 397 aaPredicted RBP16.88■□□□□ 0.29
NEDD1-208ENST00000555806 ANGPTL4Q9BY76 406 aa16.88■□□□□ 0.29
NEDD1-208ENST00000555806 ANKRA2Q9H9E1 313 aa16.88■□□□□ 0.29
NEDD1-208ENST00000555806 MKS1Q9NXB0 559 aa16.88■□□□□ 0.29
NEDD1-208ENST00000555806 ALKBH4Q9NXW9 302 aa16.88■□□□□ 0.29
NEDD1-208ENST00000555806 SPRR3Q9UBC9 169 aa16.88■□□□□ 0.29
NEDD1-208ENST00000555806 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.88■□□□□ 0.29
NEDD1-208ENST00000555806 V9GYY5 206 aaPredicted RBP16.88■□□□□ 0.29
NEDD1-208ENST00000555806 EXPH5Q8NEV8 1989 aa16.88■□□□□ 0.29
NEDD1-208ENST00000555806 NINQ8N4C6 2090 aa16.87■□□□□ 0.29
NEDD1-208ENST00000555806 C19orf84I3L1E1 186 aa16.87■□□□□ 0.29
NEDD1-208ENST00000555806 AZIN1O14977 448 aa16.87■□□□□ 0.29
NEDD1-208ENST00000555806 SPAG7O75391 227 aa16.87■□□□□ 0.29
NEDD1-208ENST00000555806 TRAPPC6AO75865 159 aa16.87■□□□□ 0.29
NEDD1-208ENST00000555806 PRF1P14222 555 aa16.87■□□□□ 0.29
NEDD1-208ENST00000555806 NAGAP17050 411 aa16.87■□□□□ 0.29
NEDD1-208ENST00000555806 ENDOUP21128 410 aaKnown RBP16.87■□□□□ 0.29
NEDD1-208ENST00000555806 MPIP34949 423 aa16.87■□□□□ 0.29
NEDD1-208ENST00000555806 CASP3P42574 277 aa16.87■□□□□ 0.29
NEDD1-208ENST00000555806 PPICP45877 212 aa16.87■□□□□ 0.29
NEDD1-208ENST00000555806 EMDP50402 254 aa16.87■□□□□ 0.29
NEDD1-208ENST00000555806 NUP107P57740 925 aa16.87■□□□□ 0.29
NEDD1-208ENST00000555806 PMPCAQ10713 525 aa16.87■□□□□ 0.29
NEDD1-208ENST00000555806 TOMM20Q15388 145 aa16.87■□□□□ 0.29
NEDD1-208ENST00000555806 EMBQ6PCB8 327 aa16.87■□□□□ 0.29
NEDD1-208ENST00000555806 NUP54Q7Z3B4 507 aa16.87■□□□□ 0.29
NEDD1-208ENST00000555806 TICAM1Q8IUC6 712 aa16.87■□□□□ 0.29
NEDD1-208ENST00000555806 BANPQ8N9N5 519 aa16.87■□□□□ 0.29
NEDD1-208ENST00000555806 FAM76AQ8TAV0 307 aa16.87■□□□□ 0.29
NEDD1-208ENST00000555806 ERP27Q96DN0 273 aa16.87■□□□□ 0.29
NEDD1-208ENST00000555806 FAM111AQ96PZ2 611 aa16.87■□□□□ 0.29
NEDD1-208ENST00000555806 ACKR4Q9NPB9 350 aa16.87■□□□□ 0.29
NEDD1-208ENST00000555806 MYNNQ9NPC7 610 aa16.87■□□□□ 0.29
NEDD1-208ENST00000555806 RNF6Q9Y252 685 aa16.87■□□□□ 0.29
NEDD1-208ENST00000555806 PTGDR2Q9Y5Y4 395 aa16.87■□□□□ 0.29
NEDD1-208ENST00000555806 NCKAP5O14513 1909 aa16.87■□□□□ 0.29
NEDD1-208ENST00000555806 FRG2CA6NGY1 282 aa16.86■□□□□ 0.29
NEDD1-208ENST00000555806 FAM90A27PA6NNH2 459 aa16.86■□□□□ 0.29
NEDD1-208ENST00000555806 SLC28A1O00337 649 aa16.86■□□□□ 0.29
NEDD1-208ENST00000555806 GNB5O14775 395 aa16.86■□□□□ 0.29
NEDD1-208ENST00000555806 RGS14O43566 566 aa16.86■□□□□ 0.29
NEDD1-208ENST00000555806 WDR1O75083 606 aa16.86■□□□□ 0.29
NEDD1-208ENST00000555806 SEC22BO75396 215 aa16.86■□□□□ 0.29
NEDD1-208ENST00000555806 NME6O75414 186 aaPredicted RBP16.86■□□□□ 0.29
NEDD1-208ENST00000555806 DRD5P21918 477 aa16.86■□□□□ 0.29
NEDD1-208ENST00000555806 CHRNB4P30926 498 aa16.86■□□□□ 0.29
NEDD1-208ENST00000555806 NCBP2P52298 156 aaKnown RBP eCLIP16.86■□□□□ 0.29
NEDD1-208ENST00000555806 DESI1Q6ICB0 168 aa16.86■□□□□ 0.29
NEDD1-208ENST00000555806 FAM71E1Q6IPT2 247 aa16.86■□□□□ 0.29
NEDD1-208ENST00000555806 NOXRED1Q6NXP6 359 aa16.86■□□□□ 0.29
NEDD1-208ENST00000555806 B3GNT6Q6ZMB0 384 aa16.86■□□□□ 0.29
NEDD1-208ENST00000555806 OR10Q1Q8NGQ4 319 aa16.86■□□□□ 0.29
NEDD1-208ENST00000555806 NEIL3Q8TAT5 605 aa16.86■□□□□ 0.29
NEDD1-208ENST00000555806 HGDQ93099 445 aa16.86■□□□□ 0.29
NEDD1-208ENST00000555806 TRMOQ9BU70 441 aa16.86■□□□□ 0.29
NEDD1-208ENST00000555806 OSBPL11Q9BXB4 747 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms