RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 CRHR1P34998 444 aa22.42■■□□□ 1.18
PRKCH-216ENST00000555542 FOXA1P55317 472 aa22.42■■□□□ 1.18
PRKCH-216ENST00000555542 C1orf185Q5T7R7 199 aa22.42■■□□□ 1.18
PRKCH-216ENST00000555542 MEX3BQ6ZN04 569 aaKnown RBP22.42■■□□□ 1.18
PRKCH-216ENST00000555542 TDRPQ86YL5 185 aa22.42■■□□□ 1.18
PRKCH-216ENST00000555542 LILRB4Q8NHJ6 448 aa22.42■■□□□ 1.18
PRKCH-216ENST00000555542 NEIL3Q8TAT5 605 aa22.42■■□□□ 1.18
PRKCH-216ENST00000555542 OMA1Q96E52 524 aa22.42■■□□□ 1.18
PRKCH-216ENST00000555542 HSPBAP1Q96EW2 488 aa22.42■■□□□ 1.18
PRKCH-216ENST00000555542 ZNF681Q96N22 645 aa22.42■■□□□ 1.18
PRKCH-216ENST00000555542 TTYH2Q9BSA4 534 aa22.42■■□□□ 1.18
PRKCH-216ENST00000555542 ANGPTL4Q9BY76 406 aa22.42■■□□□ 1.18
PRKCH-216ENST00000555542 TRIM8Q9BZR9 551 aa22.42■■□□□ 1.18
PRKCH-216ENST00000555542 L2HGDHQ9H9P8 463 aa22.42■■□□□ 1.18
PRKCH-216ENST00000555542 ACKR4Q9NPB9 350 aa22.42■■□□□ 1.18
PRKCH-216ENST00000555542 ZNF639Q9UID6 485 aa22.42■■□□□ 1.18
PRKCH-216ENST00000555542 H3BQF6 201 aa22.41■■□□□ 1.18
PRKCH-216ENST00000555542 ACOX3O15254 700 aa22.41■■□□□ 1.18
PRKCH-216ENST00000555542 PLIN3O60664 434 aa22.41■■□□□ 1.18
PRKCH-216ENST00000555542 BCAS2O75934 225 aaPredicted RBP22.41■■□□□ 1.18
PRKCH-216ENST00000555542 GABRA1P14867 456 aa22.41■■□□□ 1.18
PRKCH-216ENST00000555542 CPA3P15088 417 aa22.41■■□□□ 1.18
PRKCH-216ENST00000555542 KRT4P19013 534 aa22.41■■□□□ 1.18
PRKCH-216ENST00000555542 CASP3P42574 277 aa22.41■■□□□ 1.18
PRKCH-216ENST00000555542 DCAF7P61962 342 aa22.41■■□□□ 1.18
PRKCH-216ENST00000555542 DUSP8Q13202 625 aa22.41■■□□□ 1.18
PRKCH-216ENST00000555542 ERCC6LQ2NKX8 1250 aa22.41■■□□□ 1.18
PRKCH-216ENST00000555542 FRMD7Q6ZUT3 714 aa22.41■■□□□ 1.18
PRKCH-216ENST00000555542 SIMC1Q8NDZ2 872 aa22.41■■□□□ 1.18
PRKCH-216ENST00000555542 OR9A2Q8NGT5 310 aa22.41■■□□□ 1.18
PRKCH-216ENST00000555542 RDH11Q8TC12 318 aa22.41■■□□□ 1.18
PRKCH-216ENST00000555542 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.41■■□□□ 1.18
PRKCH-216ENST00000555542 CTHRC1Q96CG8 243 aa22.41■■□□□ 1.18
PRKCH-216ENST00000555542 SPOCK3Q9BQ16 436 aa22.41■■□□□ 1.18
PRKCH-216ENST00000555542 UCK2Q9BZX2 261 aa22.41■■□□□ 1.18
PRKCH-216ENST00000555542 IQCGQ9H095 443 aaKnown RBP22.41■■□□□ 1.18
PRKCH-216ENST00000555542 EHD3Q9NZN3 535 aa22.41■■□□□ 1.18
PRKCH-216ENST00000555542 FAM215AQ9Y5M1 114 aa22.41■■□□□ 1.18
PRKCH-216ENST00000555542 CDH16O75309 829 aa22.4■■□□□ 1.18
PRKCH-216ENST00000555542 ABCB1P08183 1280 aaPredicted RBP22.4■■□□□ 1.18
PRKCH-216ENST00000555542 GLI4P10075 376 aa22.4■■□□□ 1.18
PRKCH-216ENST00000555542 NAGAP17050 411 aa22.4■■□□□ 1.18
PRKCH-216ENST00000555542 GSTM5P46439 218 aa22.4■■□□□ 1.18
PRKCH-216ENST00000555542 ZNF763Q0D2J5 394 aa22.4■■□□□ 1.18
PRKCH-216ENST00000555542 ZNF628Q5EBL2 1059 aa22.4■■□□□ 1.18
PRKCH-216ENST00000555542 SH2D5Q6ZV89 423 aa22.4■■□□□ 1.18
PRKCH-216ENST00000555542 C4orf33Q8N1A6 199 aa22.4■■□□□ 1.18
PRKCH-216ENST00000555542 ZNF675Q8TD23 568 aa22.4■■□□□ 1.18
PRKCH-216ENST00000555542 KAT2AQ92830 837 aa22.4■■□□□ 1.18
PRKCH-216ENST00000555542 BBS4Q96RK4 519 aa22.4■■□□□ 1.18
PRKCH-216ENST00000555542 SHCBP1LQ9BZQ2 653 aa22.4■■□□□ 1.18
PRKCH-216ENST00000555542 C12orf65Q9H3J6 166 aaKnown RBP22.4■■□□□ 1.18
PRKCH-216ENST00000555542 MIEF1Q9NQG6 463 aa22.4■■□□□ 1.18
PRKCH-216ENST00000555542 SLC35C2Q9NQQ7 365 aa22.4■■□□□ 1.18
PRKCH-216ENST00000555542 KLRF1Q9NZS2 232 aa22.4■■□□□ 1.18
PRKCH-216ENST00000555542 MID2Q9UJV3 735 aa22.4■■□□□ 1.18
PRKCH-216ENST00000555542 PKDREJQ9NTG1 2253 aa22.4■■□□□ 1.18
PRKCH-216ENST00000555542 TLDC2A0PJX2 215 aa22.39■■□□□ 1.17
PRKCH-216ENST00000555542 GNB5O14775 395 aa22.39■■□□□ 1.17
PRKCH-216ENST00000555542 HOXD4P09016 255 aaPredicted RBP22.39■■□□□ 1.17
PRKCH-216ENST00000555542 SSTR2P30874 369 aa22.39■■□□□ 1.17
PRKCH-216ENST00000555542 PPICP45877 212 aa22.39■■□□□ 1.17
PRKCH-216ENST00000555542 DNAJB13P59910 316 aa22.39■■□□□ 1.17
PRKCH-216ENST00000555542 C2orf80Q0P641 193 aa22.39■■□□□ 1.17
PRKCH-216ENST00000555542 GALNT18Q6P9A2 607 aa22.39■■□□□ 1.17
PRKCH-216ENST00000555542 NUP54Q7Z3B4 507 aa22.39■■□□□ 1.17
PRKCH-216ENST00000555542 FAM9CQ8IZT9 166 aa22.39■■□□□ 1.17
PRKCH-216ENST00000555542 TMEM41AQ96HV5 264 aa22.39■■□□□ 1.17
PRKCH-216ENST00000555542 GNRHR2Q96P88 292 aa22.39■■□□□ 1.17
PRKCH-216ENST00000555542 OSBPL11Q9BXB4 747 aa22.39■■□□□ 1.17
PRKCH-216ENST00000555542 RRAGDQ9NQL2 400 aaPredicted RBP22.39■■□□□ 1.17
PRKCH-216ENST00000555542 C15orf41Q9Y2V0 281 aa22.39■■□□□ 1.17
PRKCH-216ENST00000555542 POLR3HQ9Y535 204 aaPredicted RBP22.39■■□□□ 1.17
PRKCH-216ENST00000555542 SERTM1A2A2V5 107 aa22.38■■□□□ 1.17
PRKCH-216ENST00000555542 FRG2CA6NGY1 282 aa22.38■■□□□ 1.17
PRKCH-216ENST00000555542 FAM47E-STBD1D6RA91 191 aa22.38■■□□□ 1.17
PRKCH-216ENST00000555542 DRD5P21918 477 aa22.38■■□□□ 1.17
PRKCH-216ENST00000555542 MPIP34949 423 aa22.38■■□□□ 1.17
PRKCH-216ENST00000555542 KRT20P35900 424 aa22.38■■□□□ 1.17
PRKCH-216ENST00000555542 ZFP36L2P47974 494 aaKnown RBP22.38■■□□□ 1.17
PRKCH-216ENST00000555542 EMDP50402 254 aa22.38■■□□□ 1.17
PRKCH-216ENST00000555542 LIPMQ5VYY2 423 aa22.38■■□□□ 1.17
PRKCH-216ENST00000555542 RTL6Q6ICC9 239 aa22.38■■□□□ 1.17
PRKCH-216ENST00000555542 ANGPTL8Q6UXH0 198 aa22.38■■□□□ 1.17
PRKCH-216ENST00000555542 OR1J4Q8NGS1 313 aa22.38■■□□□ 1.17
PRKCH-216ENST00000555542 ENKD1Q9H0I2 346 aa22.38■■□□□ 1.17
PRKCH-216ENST00000555542 ANKRA2Q9H9E1 313 aa22.38■■□□□ 1.17
PRKCH-216ENST00000555542 OXSMQ9NWU1 459 aa22.38■■□□□ 1.17
PRKCH-216ENST00000555542 DDCP20711 480 aa22.37■■□□□ 1.17
PRKCH-216ENST00000555542 ELAVL4P26378 380 aaKnown RBP22.37■■□□□ 1.17
PRKCH-216ENST00000555542 DESI1Q6ICB0 168 aa22.37■■□□□ 1.17
PRKCH-216ENST00000555542 TMBIM1Q969X1 311 aa22.37■■□□□ 1.17
PRKCH-216ENST00000555542 ERP27Q96DN0 273 aa22.37■■□□□ 1.17
PRKCH-216ENST00000555542 NODALQ96S42 347 aa22.37■■□□□ 1.17
PRKCH-216ENST00000555542 SIRT5Q9NXA8 310 aa22.37■■□□□ 1.17
PRKCH-216ENST00000555542 FREM3P0C091 2139 aa22.37■■□□□ 1.17
PRKCH-216ENST00000555542 CREBBPQ92793 2442 aa22.36■■□□□ 1.17
PRKCH-216ENST00000555542 A0A0G2JNJ9 132 aa22.36■■□□□ 1.17
PRKCH-216ENST00000555542 UGT2B11O75310 529 aa22.36■■□□□ 1.17
PRKCH-216ENST00000555542 REM1O75628 298 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms