RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 BTBD9Q96Q07 612 aa10.86□□□□□ -0.67
VRK1-204ENST00000555351 ROPN1BQ9BZX4 212 aaPredicted RBP10.86□□□□□ -0.67
VRK1-204ENST00000555351 NXF5Q9H1B4 397 aaKnown RBP10.86□□□□□ -0.67
VRK1-204ENST00000555351 UBQLN3Q9H347 655 aa10.86□□□□□ -0.67
VRK1-204ENST00000555351 LDAHQ9H6V9 325 aa10.86□□□□□ -0.67
VRK1-204ENST00000555351 ANKZF1Q9H8Y5 726 aa10.86□□□□□ -0.67
VRK1-204ENST00000555351 ROPN1Q9HAT0 212 aaPredicted RBP10.86□□□□□ -0.67
VRK1-204ENST00000555351 SLC24A3Q9HC58 644 aa10.86□□□□□ -0.67
VRK1-204ENST00000555351 MYNNQ9NPC7 610 aa10.86□□□□□ -0.67
VRK1-204ENST00000555351 RRAGDQ9NQL2 400 aaPredicted RBP10.86□□□□□ -0.67
VRK1-204ENST00000555351 SLC35C2Q9NQQ7 365 aa10.86□□□□□ -0.67
VRK1-204ENST00000555351 PNPLA3Q9NST1 481 aa10.86□□□□□ -0.67
VRK1-204ENST00000555351 BCAP29Q9UHQ4 241 aa10.86□□□□□ -0.67
VRK1-204ENST00000555351 GPR55Q9Y2T6 319 aaPredicted RBP10.86□□□□□ -0.67
VRK1-204ENST00000555351 TIMM22Q9Y584 194 aa10.86□□□□□ -0.67
VRK1-204ENST00000555351 NOTCH2Q04721 2471 aa10.86□□□□□ -0.67
VRK1-204ENST00000555351 EXPH5Q8NEV8 1989 aa10.86□□□□□ -0.67
VRK1-204ENST00000555351 A0A087WV62 115 aa10.85□□□□□ -0.67
VRK1-204ENST00000555351 OR6C70A6NIJ9 312 aa10.85□□□□□ -0.67
VRK1-204ENST00000555351 ZNHIT1O43257 154 aa10.85□□□□□ -0.67
VRK1-204ENST00000555351 RFPL3SP0C7P2 107 aa10.85□□□□□ -0.67
VRK1-204ENST00000555351 CDK9P50750 372 aaKnown RBP10.85□□□□□ -0.67
VRK1-204ENST00000555351 FBXW4P57775 412 aa10.85□□□□□ -0.67
VRK1-204ENST00000555351 DUSP2Q05923 314 aa10.85□□□□□ -0.67
VRK1-204ENST00000555351 DUSP8Q13202 625 aa10.85□□□□□ -0.67
VRK1-204ENST00000555351 CDSNQ15517 529 aa10.85□□□□□ -0.67
VRK1-204ENST00000555351 IMPG1Q17R60 797 aa10.85□□□□□ -0.67
VRK1-204ENST00000555351 ERCC6LQ2NKX8 1250 aa10.85□□□□□ -0.67
VRK1-204ENST00000555351 TRMT12Q53H54 448 aaKnown RBP10.85□□□□□ -0.67
VRK1-204ENST00000555351 NHSL2Q5HYW2 709 aa10.85□□□□□ -0.67
VRK1-204ENST00000555351 SPDYAQ5MJ70 313 aa10.85□□□□□ -0.67
VRK1-204ENST00000555351 EMBQ6PCB8 327 aa10.85□□□□□ -0.67
VRK1-204ENST00000555351 B3GNT6Q6ZMB0 384 aa10.85□□□□□ -0.67
VRK1-204ENST00000555351 MMP21Q8N119 569 aa10.85□□□□□ -0.67
VRK1-204ENST00000555351 CCDC63Q8NA47 563 aa10.85□□□□□ -0.67
VRK1-204ENST00000555351 OR52R1Q8NGF1 315 aa10.85□□□□□ -0.67
VRK1-204ENST00000555351 OR5M3Q8NGP4 307 aa10.85□□□□□ -0.67
VRK1-204ENST00000555351 EPS8L3Q8TE67 593 aaKnown RBP10.85□□□□□ -0.67
VRK1-204ENST00000555351 C14orf79Q96F83 325 aa10.85□□□□□ -0.67
VRK1-204ENST00000555351 RILPQ96NA2 401 aa10.85□□□□□ -0.67
VRK1-204ENST00000555351 KCNA7Q96RP8 456 aa10.85□□□□□ -0.67
VRK1-204ENST00000555351 TTYH2Q9BSA4 534 aa10.85□□□□□ -0.67
VRK1-204ENST00000555351 ITPAQ9BY32 194 aa10.85□□□□□ -0.67
VRK1-204ENST00000555351 TAS2R9Q9NYW1 312 aa10.85□□□□□ -0.67
VRK1-204ENST00000555351 LGALS13Q9UHV8 139 aa10.85□□□□□ -0.67
VRK1-204ENST00000555351 ACAD8Q9UKU7 415 aa10.85□□□□□ -0.67
VRK1-204ENST00000555351 RNF6Q9Y252 685 aa10.85□□□□□ -0.67
VRK1-204ENST00000555351 DTX4Q9Y2E6 619 aa10.85□□□□□ -0.67
VRK1-204ENST00000555351 C15orf41Q9Y2V0 281 aa10.85□□□□□ -0.67
VRK1-204ENST00000555351 PLLPQ9Y342 182 aa10.85□□□□□ -0.67
VRK1-204ENST00000555351 CCL27Q9Y4X3 112 aa10.85□□□□□ -0.67
VRK1-204ENST00000555351 LIPGQ9Y5X9 500 aa10.85□□□□□ -0.67
VRK1-204ENST00000555351 FOXO6A8MYZ6 492 aa10.84□□□□□ -0.67
VRK1-204ENST00000555351 MYO1GB0I1T2 1018 aa10.84□□□□□ -0.67
VRK1-204ENST00000555351 SLC28A1O00337 649 aa10.84□□□□□ -0.67
VRK1-204ENST00000555351 TRIM13O60858 407 aa10.84□□□□□ -0.67
VRK1-204ENST00000555351 CRCPO75575 148 aa10.84□□□□□ -0.67
VRK1-204ENST00000555351 FGF4P08620 206 aa10.84□□□□□ -0.67
VRK1-204ENST00000555351 CELA3AP09093 270 aa10.84□□□□□ -0.67
VRK1-204ENST00000555351 NEFHP12036 1026 aa10.84□□□□□ -0.67
VRK1-204ENST00000555351 PRF1P14222 555 aa10.84□□□□□ -0.67
VRK1-204ENST00000555351 PCSK2P16519 638 aa10.84□□□□□ -0.67
VRK1-204ENST00000555351 IGFBP2P18065 325 aa10.84□□□□□ -0.67
VRK1-204ENST00000555351 ENDOUP21128 410 aaKnown RBP10.84□□□□□ -0.67
VRK1-204ENST00000555351 GDF1P27539 372 aa10.84□□□□□ -0.67
VRK1-204ENST00000555351 SSTR2P30874 369 aa10.84□□□□□ -0.67
VRK1-204ENST00000555351 MASP1P48740 699 aa10.84□□□□□ -0.67
VRK1-204ENST00000555351 FOXA1P55317 472 aa10.84□□□□□ -0.67
VRK1-204ENST00000555351 NUP107P57740 925 aa10.84□□□□□ -0.67
VRK1-204ENST00000555351 MRPS22P82650 360 aaKnown RBP10.84□□□□□ -0.67
VRK1-204ENST00000555351 PLCXD2Q0VAA5 305 aa10.84□□□□□ -0.67
VRK1-204ENST00000555351 PMPCAQ10713 525 aa10.84□□□□□ -0.67
VRK1-204ENST00000555351 EXOSC7Q15024 291 aaKnown RBP10.84□□□□□ -0.67
VRK1-204ENST00000555351 C1orf185Q5T7R7 199 aa10.84□□□□□ -0.67
VRK1-204ENST00000555351 RIPPLY2Q5TAB7 128 aa10.84□□□□□ -0.67
VRK1-204ENST00000555351 FNDC7Q5VTL7 733 aa10.84□□□□□ -0.67
VRK1-204ENST00000555351 TIGD3Q6B0B8 471 aa10.84□□□□□ -0.67
VRK1-204ENST00000555351 FAM71E1Q6IPT2 247 aa10.84□□□□□ -0.67
VRK1-204ENST00000555351 WDR93Q6P2C0 686 aa10.84□□□□□ -0.67
VRK1-204ENST00000555351 TMEM64Q6YI46 380 aa10.84□□□□□ -0.67
VRK1-204ENST00000555351 NCCRP1Q6ZVX7 275 aaPredicted RBP10.84□□□□□ -0.67
VRK1-204ENST00000555351 TRABD2AQ86V40 505 aa10.84□□□□□ -0.67
VRK1-204ENST00000555351 PM20D2Q8IYS1 436 aa10.84□□□□□ -0.67
VRK1-204ENST00000555351 CCDC116Q8IYX3 515 aa10.84□□□□□ -0.67
VRK1-204ENST00000555351 FAM9CQ8IZT9 166 aa10.84□□□□□ -0.67
VRK1-204ENST00000555351 LIX1Q8N485 282 aa10.84□□□□□ -0.67
VRK1-204ENST00000555351 BANPQ8N9N5 519 aa10.84□□□□□ -0.67
VRK1-204ENST00000555351 ADCY4Q8NFM4 1077 aa10.84□□□□□ -0.67
VRK1-204ENST00000555351 HGDQ93099 445 aa10.84□□□□□ -0.67
VRK1-204ENST00000555351 EXOSC8Q96B26 276 aaKnown RBP10.84□□□□□ -0.67
VRK1-204ENST00000555351 TMCO6Q96DC7 493 aa10.84□□□□□ -0.67
VRK1-204ENST00000555351 OMA1Q96E52 524 aa10.84□□□□□ -0.67
VRK1-204ENST00000555351 SLC35A4Q96G79 324 aa10.84□□□□□ -0.67
VRK1-204ENST00000555351 APOPT1Q96IL0 206 aa10.84□□□□□ -0.67
VRK1-204ENST00000555351 VSTM2LQ96N03 204 aa10.84□□□□□ -0.67
VRK1-204ENST00000555351 TRIM8Q9BZR9 551 aa10.84□□□□□ -0.67
VRK1-204ENST00000555351 IQCGQ9H095 443 aaKnown RBP10.84□□□□□ -0.67
VRK1-204ENST00000555351 EXO5Q9H790 373 aa10.84□□□□□ -0.67
VRK1-204ENST00000555351 METTL7AQ9H8H3 244 aa10.84□□□□□ -0.67
VRK1-204ENST00000555351 KCNJ16Q9NPI9 418 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms