RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 TMEM107Q6UX40 140 aa11.16□□□□□ -0.62
SRP54-206ENST00000555317 SLC22A16Q86VW1 577 aa11.16□□□□□ -0.62
SRP54-206ENST00000555317 GHDCQ8N2G8 530 aa11.16□□□□□ -0.62
SRP54-206ENST00000555317 FBXW8Q8N3Y1 598 aa11.16□□□□□ -0.62
SRP54-206ENST00000555317 ZNF441Q8N8Z8 693 aa11.16□□□□□ -0.62
SRP54-206ENST00000555317 ZFP62Q8NB50 900 aaPredicted RBP11.16□□□□□ -0.62
SRP54-206ENST00000555317 OR2M7Q8NG81 312 aa11.16□□□□□ -0.62
SRP54-206ENST00000555317 OR10G3Q8NGC4 313 aa11.16□□□□□ -0.62
SRP54-206ENST00000555317 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.16□□□□□ -0.62
SRP54-206ENST00000555317 RAB3IL1Q8TBN0 382 aa11.16□□□□□ -0.62
SRP54-206ENST00000555317 ADIPOR1Q96A54 375 aa11.16□□□□□ -0.62
SRP54-206ENST00000555317 CTHRC1Q96CG8 243 aa11.16□□□□□ -0.62
SRP54-206ENST00000555317 MTERF3Q96E29 417 aa11.16□□□□□ -0.62
SRP54-206ENST00000555317 HSPBAP1Q96EW2 488 aa11.16□□□□□ -0.62
SRP54-206ENST00000555317 ZBED6CLQ96FA7 236 aaPredicted RBP11.16□□□□□ -0.62
SRP54-206ENST00000555317 ZNF764Q96H86 408 aaPredicted RBP11.16□□□□□ -0.62
SRP54-206ENST00000555317 LCORQ96JN0 433 aaPredicted RBP11.16□□□□□ -0.62
SRP54-206ENST00000555317 EGLN2Q96KS0 407 aa11.16□□□□□ -0.62
SRP54-206ENST00000555317 FCRL1Q96LA6 429 aa11.16□□□□□ -0.62
SRP54-206ENST00000555317 GPR137Q96N19 417 aa11.16□□□□□ -0.62
SRP54-206ENST00000555317 PRPF18Q99633 342 aaKnown RBP11.16□□□□□ -0.62
SRP54-206ENST00000555317 ATAD3AQ9NVI7 634 aa11.16□□□□□ -0.62
SRP54-206ENST00000555317 DDX18Q9NVP1 670 aaKnown RBP11.16□□□□□ -0.62
SRP54-206ENST00000555317 THAP1Q9NVV9 213 aa11.16□□□□□ -0.62
SRP54-206ENST00000555317 CNIH4Q9P003 139 aa11.16□□□□□ -0.62
SRP54-206ENST00000555317 GIMAP2Q9UG22 337 aa11.16□□□□□ -0.62
SRP54-206ENST00000555317 BAIAP2L1Q9UHR4 511 aa11.16□□□□□ -0.62
SRP54-206ENST00000555317 ZNF639Q9UID6 485 aa11.16□□□□□ -0.62
SRP54-206ENST00000555317 BOKQ9UMX3 212 aaPredicted RBP11.16□□□□□ -0.62
SRP54-206ENST00000555317 SLC5A6Q9Y289 635 aa11.16□□□□□ -0.62
SRP54-206ENST00000555317 NPFFR2Q9Y5X5 522 aa11.16□□□□□ -0.62
SRP54-206ENST00000555317 ZNF407Q9C0G0 2248 aa11.16□□□□□ -0.62
SRP54-206ENST00000555317 EXPH5Q8NEV8 1989 aa11.16□□□□□ -0.62
SRP54-206ENST00000555317 UTP20O75691 2785 aaKnown RBP11.15□□□□□ -0.62
SRP54-206ENST00000555317 FAM166BA8MTA8 275 aa11.15□□□□□ -0.62
SRP54-206ENST00000555317 CDC40O60508 579 aaKnown RBP eCLIP11.15□□□□□ -0.62
SRP54-206ENST00000555317 PLOD3O60568 738 aa11.15□□□□□ -0.62
SRP54-206ENST00000555317 ZNF354AO60765 605 aaPredicted RBP11.15□□□□□ -0.62
SRP54-206ENST00000555317 ABOP16442 354 aa11.15□□□□□ -0.62
SRP54-206ENST00000555317 ABCD3P28288 659 aa11.15□□□□□ -0.62
SRP54-206ENST00000555317 MC3RP41968 323 aa11.15□□□□□ -0.62
SRP54-206ENST00000555317 MANFP55145 182 aaKnown RBP11.15□□□□□ -0.62
SRP54-206ENST00000555317 WDR4P57081 412 aaKnown RBP11.15□□□□□ -0.62
SRP54-206ENST00000555317 FBXW4P57775 412 aa11.15□□□□□ -0.62
SRP54-206ENST00000555317 PPIAP62937 165 aaKnown RBP11.15□□□□□ -0.62
SRP54-206ENST00000555317 HSPB3Q12988 150 aa11.15□□□□□ -0.62
SRP54-206ENST00000555317 ZNHIT3Q15649 155 aaPredicted RBP11.15□□□□□ -0.62
SRP54-206ENST00000555317 NTRK2Q16620 822 aa11.15□□□□□ -0.62
SRP54-206ENST00000555317 TBCELQ5QJ74 424 aa11.15□□□□□ -0.62
SRP54-206ENST00000555317 C6orf136Q5SQH8 315 aa11.15□□□□□ -0.62
SRP54-206ENST00000555317 PRAMEF20Q5VT98 475 aa11.15□□□□□ -0.62
SRP54-206ENST00000555317 IL23RQ5VWK5 629 aa11.15□□□□□ -0.62
SRP54-206ENST00000555317 CES4AQ5XG92 561 aa11.15□□□□□ -0.62
SRP54-206ENST00000555317 PAOXQ6QHF9 649 aa11.15□□□□□ -0.62
SRP54-206ENST00000555317 TMEM64Q6YI46 380 aa11.15□□□□□ -0.62
SRP54-206ENST00000555317 BNC2Q6ZN30 1099 aaPredicted RBP11.15□□□□□ -0.62
SRP54-206ENST00000555317 RGS9BPQ6ZS82 235 aa11.15□□□□□ -0.62
SRP54-206ENST00000555317 SZRD1Q7Z422 152 aa11.15□□□□□ -0.62
SRP54-206ENST00000555317 PRR22Q8IZ63 422 aa11.15□□□□□ -0.62
SRP54-206ENST00000555317 SLC34A3Q8N130 599 aa11.15□□□□□ -0.62
SRP54-206ENST00000555317 OR7G2Q8NG99 324 aa11.15□□□□□ -0.62
SRP54-206ENST00000555317 PAQR8Q8TEZ7 354 aa11.15□□□□□ -0.62
SRP54-206ENST00000555317 DIO2Q92813 273 aa11.15□□□□□ -0.62
SRP54-206ENST00000555317 ATP6V1G3Q96LB4 118 aa11.15□□□□□ -0.62
SRP54-206ENST00000555317 C3orf30Q96M34 536 aa11.15□□□□□ -0.62
SRP54-206ENST00000555317 JSRP1Q96MG2 331 aaPredicted RBP11.15□□□□□ -0.62
SRP54-206ENST00000555317 AMDHD1Q96NU7 426 aa11.15□□□□□ -0.62
SRP54-206ENST00000555317 SORT1Q99523 831 aa11.15□□□□□ -0.62
SRP54-206ENST00000555317 NXF5Q9H1B4 397 aaKnown RBP11.15□□□□□ -0.62
SRP54-206ENST00000555317 ACBD3Q9H3P7 528 aa11.15□□□□□ -0.62
SRP54-206ENST00000555317 GLIPR2Q9H4G4 154 aa11.15□□□□□ -0.62
SRP54-206ENST00000555317 ZNF395Q9H8N7 513 aaPredicted RBP11.15□□□□□ -0.62
SRP54-206ENST00000555317 NOP53Q9NZM5 478 aaKnown RBP11.15□□□□□ -0.62
SRP54-206ENST00000555317 B4GALT7Q9UBV7 327 aa11.15□□□□□ -0.62
SRP54-206ENST00000555317 DTX4Q9Y2E6 619 aa11.15□□□□□ -0.62
SRP54-206ENST00000555317 OR10H1Q9Y4A9 318 aa11.15□□□□□ -0.62
SRP54-206ENST00000555317 PCNX1Q96RV3 2341 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 A0A087WV62 115 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 TRGV8A0A0C4DH27 118 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 A0A0G2JMM0 328 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 A0A1B0GUH1 482 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 A0A1W2PPB8 328 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 A0A1W2PRS3 328 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 FRG2CA6NGY1 282 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 KIR3DP1A8MWS1 328 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 SCAMP2O15127 329 aaKnown RBP11.14□□□□□ -0.63
SRP54-206ENST00000555317 ASNA1O43681 348 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 HS6ST1O60243 411 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 TBX19O60806 448 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 ERN1O75460 977 aaKnown RBP11.14□□□□□ -0.63
SRP54-206ENST00000555317 PPM1BO75688 479 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 PRPS1L1P21108 318 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 DRD5P21918 477 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 IL12BP29460 328 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 PIGAP37287 484 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 PPICP45877 212 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 MASP1P48740 699 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 DNASE1L1P49184 302 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 EMDP50402 254 aa11.14□□□□□ -0.63
SRP54-206ENST00000555317 MRPS22P82650 360 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms