RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 WDFY3Q8IZQ1 3526 aa10.15□□□□□ -0.78
SHMT2-218ENST00000555213 A0A096LPI6 279 aa10.15□□□□□ -0.78
SHMT2-218ENST00000555213 TRBV11-1A0A0K0K1C0 115 aa10.15□□□□□ -0.78
SHMT2-218ENST00000555213 MYOCOSA0A1B0GUC4 107 aa10.15□□□□□ -0.78
SHMT2-218ENST00000555213 ERN1O75460 977 aaKnown RBP10.15□□□□□ -0.78
SHMT2-218ENST00000555213 GSNP06396 782 aa10.15□□□□□ -0.78
SHMT2-218ENST00000555213 EFNA1P20827 205 aaPredicted RBP10.15□□□□□ -0.78
SHMT2-218ENST00000555213 TRPC1P48995 793 aa10.15□□□□□ -0.78
SHMT2-218ENST00000555213 NCBP2P52298 156 aaKnown RBP eCLIP10.15□□□□□ -0.78
SHMT2-218ENST00000555213 SLC7A2P52569 658 aa10.15□□□□□ -0.78
SHMT2-218ENST00000555213 Q0VFX4 171 aa10.15□□□□□ -0.78
SHMT2-218ENST00000555213 RAPSNQ13702 412 aa10.15□□□□□ -0.78
SHMT2-218ENST00000555213 ZNF267Q14586 743 aaPredicted RBP10.15□□□□□ -0.78
SHMT2-218ENST00000555213 DPY19L1Q2PZI1 675 aa10.15□□□□□ -0.78
SHMT2-218ENST00000555213 RABL3Q5HYI8 236 aa10.15□□□□□ -0.78
SHMT2-218ENST00000555213 ABHD17BQ5VST6 288 aa10.15□□□□□ -0.78
SHMT2-218ENST00000555213 FAM180BQ6P0A1 224 aa10.15□□□□□ -0.78
SHMT2-218ENST00000555213 HSDL2Q6YN16 418 aa10.15□□□□□ -0.78
SHMT2-218ENST00000555213 BNC2Q6ZN30 1099 aaPredicted RBP10.15□□□□□ -0.78
SHMT2-218ENST00000555213 RNF111Q6ZNA4 994 aa10.15□□□□□ -0.78
SHMT2-218ENST00000555213 DHDDSQ86SQ9 333 aa10.15□□□□□ -0.78
SHMT2-218ENST00000555213 LGI4Q8N135 537 aa10.15□□□□□ -0.78
SHMT2-218ENST00000555213 RNF148Q8N7C7 305 aa10.15□□□□□ -0.78
SHMT2-218ENST00000555213 FAM156AQ8NDB6 213 aa10.15□□□□□ -0.78
SHMT2-218ENST00000555213 FDCSPQ8NFU4 85 aa10.15□□□□□ -0.78
SHMT2-218ENST00000555213 OR5L2Q8NGL0 311 aa10.15□□□□□ -0.78
SHMT2-218ENST00000555213 OR1N1Q8NGS0 311 aa10.15□□□□□ -0.78
SHMT2-218ENST00000555213 BRIX1Q8TDN6 353 aaKnown RBP10.15□□□□□ -0.78
SHMT2-218ENST00000555213 CIDECQ96AQ7 238 aaPredicted RBP10.15□□□□□ -0.78
SHMT2-218ENST00000555213 PPWD1Q96BP3 646 aaKnown RBP10.15□□□□□ -0.78
SHMT2-218ENST00000555213 CNRIP1Q96F85 164 aaPredicted RBP10.15□□□□□ -0.78
SHMT2-218ENST00000555213 ZBED6CLQ96FA7 236 aaPredicted RBP10.15□□□□□ -0.78
SHMT2-218ENST00000555213 WBP1Q96G27 269 aa10.15□□□□□ -0.78
SHMT2-218ENST00000555213 ZNF583Q96ND8 569 aa10.15□□□□□ -0.78
SHMT2-218ENST00000555213 DEFB126Q9BYW3 111 aa10.15□□□□□ -0.78
SHMT2-218ENST00000555213 CXorf21Q9HAI6 301 aa10.15□□□□□ -0.78
SHMT2-218ENST00000555213 NDE1Q9NXR1 346 aa10.15□□□□□ -0.78
SHMT2-218ENST00000555213 USP22Q9UPT9 525 aa10.15□□□□□ -0.78
SHMT2-218ENST00000555213 POMPQ9Y244 141 aa10.15□□□□□ -0.78
SHMT2-218ENST00000555213 ZNF451Q9Y4E5 1061 aa10.15□□□□□ -0.78
SHMT2-218ENST00000555213 PCDHGB7Q9Y5F8 929 aa10.15□□□□□ -0.78
SHMT2-218ENST00000555213 GMEB1Q9Y692 573 aa10.15□□□□□ -0.78
SHMT2-218ENST00000555213 CROCCQ5TZA2 2017 aa10.15□□□□□ -0.78
SHMT2-218ENST00000555213 ZZEF1O43149 2961 aa10.15□□□□□ -0.78
SHMT2-218ENST00000555213 A0A1W2PS29 197 aa10.14□□□□□ -0.79
SHMT2-218ENST00000555213 MASP2O00187 686 aa10.14□□□□□ -0.79
SHMT2-218ENST00000555213 RNASET2O00584 256 aaKnown RBP10.14□□□□□ -0.79
SHMT2-218ENST00000555213 ZFAND5O76080 213 aa10.14□□□□□ -0.79
SHMT2-218ENST00000555213 KCNH1O95259 989 aa10.14□□□□□ -0.79
SHMT2-218ENST00000555213 DDAH2O95865 285 aa10.14□□□□□ -0.79
SHMT2-218ENST00000555213 CELA2AP08217 269 aa10.14□□□□□ -0.79
SHMT2-218ENST00000555213 ZCCHC18P0CG32 403 aa10.14□□□□□ -0.79
SHMT2-218ENST00000555213 ITGAMP11215 1152 aa10.14□□□□□ -0.79
SHMT2-218ENST00000555213 GPC1P35052 558 aa10.14□□□□□ -0.79
SHMT2-218ENST00000555213 SOX18P35713 384 aa10.14□□□□□ -0.79
SHMT2-218ENST00000555213 CASRP41180 1078 aa10.14□□□□□ -0.79
SHMT2-218ENST00000555213 DUSP2Q05923 314 aa10.14□□□□□ -0.79
SHMT2-218ENST00000555213 KPNB1Q14974 876 aaKnown RBP10.14□□□□□ -0.79
SHMT2-218ENST00000555213 CEBPEQ15744 281 aa10.14□□□□□ -0.79
SHMT2-218ENST00000555213 FXNQ16595 210 aa10.14□□□□□ -0.79
SHMT2-218ENST00000555213 ZNF750Q32MQ0 723 aa10.14□□□□□ -0.79
SHMT2-218ENST00000555213 LINC00303Q3SY05 128 aa10.14□□□□□ -0.79
SHMT2-218ENST00000555213 TCTN3Q6NUS6 607 aa10.14□□□□□ -0.79
SHMT2-218ENST00000555213 ISLR2Q6UXK2 745 aa10.14□□□□□ -0.79
SHMT2-218ENST00000555213 SLC29A4Q7RTT9 530 aa10.14□□□□□ -0.79
SHMT2-218ENST00000555213 NET1Q7Z628 596 aaPredicted RBP10.14□□□□□ -0.79
SHMT2-218ENST00000555213 CALHM3Q86XJ0 350 aa10.14□□□□□ -0.79
SHMT2-218ENST00000555213 CCDC116Q8IYX3 515 aa10.14□□□□□ -0.79
SHMT2-218ENST00000555213 SIRT6Q8N6T7 355 aa10.14□□□□□ -0.79
SHMT2-218ENST00000555213 NFAM1Q8NET5 270 aaPredicted RBP10.14□□□□□ -0.79
SHMT2-218ENST00000555213 OR7G1Q8NGA0 311 aa10.14□□□□□ -0.79
SHMT2-218ENST00000555213 OR9A2Q8NGT5 310 aa10.14□□□□□ -0.79
SHMT2-218ENST00000555213 OR8K3Q8NH51 312 aa10.14□□□□□ -0.79
SHMT2-218ENST00000555213 ZNF675Q8TD23 568 aa10.14□□□□□ -0.79
SHMT2-218ENST00000555213 ELP5Q8TE02 316 aa10.14□□□□□ -0.79
SHMT2-218ENST00000555213 MCUR1Q96AQ8 359 aa10.14□□□□□ -0.79
SHMT2-218ENST00000555213 SENP5Q96HI0 755 aaPredicted RBP10.14□□□□□ -0.79
SHMT2-218ENST00000555213 ITCHQ96J02 903 aa10.14□□□□□ -0.79
SHMT2-218ENST00000555213 ZNF354BQ96LW1 612 aa10.14□□□□□ -0.79
SHMT2-218ENST00000555213 ZNF681Q96N22 645 aa10.14□□□□□ -0.79
SHMT2-218ENST00000555213 CPPED1Q9BRF8 314 aaPredicted RBP10.14□□□□□ -0.79
SHMT2-218ENST00000555213 SPAG4Q9NPE6 437 aa10.14□□□□□ -0.79
SHMT2-218ENST00000555213 GPATCH2Q9NW75 528 aa10.14□□□□□ -0.79
SHMT2-218ENST00000555213 FAM120CQ9NX05 1096 aaKnown RBP10.14□□□□□ -0.79
SHMT2-218ENST00000555213 PTGFRNQ9P2B2 879 aa10.14□□□□□ -0.79
SHMT2-218ENST00000555213 ERVK-19Q9WJR5 959 aa10.14□□□□□ -0.79
SHMT2-218ENST00000555213 CFL2Q9Y281 166 aa10.14□□□□□ -0.79
SHMT2-218ENST00000555213 FASNP49327 2511 aaKnown RBP10.14□□□□□ -0.79
SHMT2-218ENST00000555213 DMXL2Q8TDJ6 3036 aa10.13□□□□□ -0.79
SHMT2-218ENST00000555213 OR6C76A6NM76 312 aa10.13□□□□□ -0.79
SHMT2-218ENST00000555213 MYO1GB0I1T2 1018 aa10.13□□□□□ -0.79
SHMT2-218ENST00000555213 PRAMEF2O60811 474 aa10.13□□□□□ -0.79
SHMT2-218ENST00000555213 COQ9O75208 318 aa10.13□□□□□ -0.79
SHMT2-218ENST00000555213 ENTPD5O75356 428 aa10.13□□□□□ -0.79
SHMT2-218ENST00000555213 BCAS2O75934 225 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-218ENST00000555213 CPSF4O95639 269 aaKnown RBP10.13□□□□□ -0.79
SHMT2-218ENST00000555213 C6orf47O95873 294 aa10.13□□□□□ -0.79
SHMT2-218ENST00000555213 IGKV3-11P04433 115 aa10.13□□□□□ -0.79
SHMT2-218ENST00000555213 HSD17B1P14061 328 aa10.13□□□□□ -0.79
SHMT2-218ENST00000555213 ME2P23368 584 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms