RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 CDK20Q8IZL9 346 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 RBFAQ8N0V3 343 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 SIX6OS1Q8N1H7 587 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 SVOPLQ8N434 492 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 C1orf52Q8N6N3 182 aaKnown RBP4.17□□□□□ -1.74
ATXN3-227ENST00000554491 CCDC185Q8N715 623 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 EMC1Q8N766 993 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 POGLUT1Q8NBL1 392 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 PAPD5Q8NDF8 572 aaKnown RBP4.17□□□□□ -1.74
ATXN3-227ENST00000554491 TMEM104Q8NE00 496 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 OR10A7Q8NGE5 316 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 OR4C15Q8NGM1 316 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 OR5M1Q8NGP8 315 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 CKAP2Q8WWK9 683 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 C22orf15Q8WYQ4 148 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 SUSD6Q92537 303 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 MCUR1Q96AQ8 359 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 ECHDC3Q96DC8 303 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 C14orf79Q96F83 325 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 SH3YL1Q96HL8 342 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-227ENST00000554491 NSL1Q96IY1 281 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 MRGPRX4Q96LA9 322 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 KLHL15Q96M94 604 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 INTS14Q96SY0 518 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 SH2D3AQ9BRG2 576 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 TMED9Q9BVK6 235 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 ZMYND12Q9H0C1 365 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 NEUROG2Q9H2A3 272 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 RPF2Q9H7B2 306 aaKnown RBP4.17□□□□□ -1.74
ATXN3-227ENST00000554491 DDX31Q9H8H2 851 aaKnown RBP4.17□□□□□ -1.74
ATXN3-227ENST00000554491 COPS7BQ9H9Q2 264 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-227ENST00000554491 VAT1LQ9HCJ6 419 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 ZNF334Q9HCZ1 680 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-227ENST00000554491 ADAP2Q9NPF8 381 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 EQTNQ9NQ60 294 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 NIT2Q9NQR4 276 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 KRT84Q9NSB2 600 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 RNF146Q9NTX7 359 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 MED17Q9NVC6 651 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 MRPS18AQ9NVS2 196 aaKnown RBP4.17□□□□□ -1.74
ATXN3-227ENST00000554491 RBAKQ9NYW8 714 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-227ENST00000554491 ERAP1Q9NZ08 941 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 SMARCAL1Q9NZC9 954 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 ZNF224Q9NZL3 707 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 VAPAQ9P0L0 249 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 DNMT3BQ9UBC3 853 aaKnown RBP4.17□□□□□ -1.74
ATXN3-227ENST00000554491 KLQ9UEF7 1012 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 RWDD2AQ9UIY3 292 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 GUCA1BQ9UMX6 200 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 SNX12Q9UMY4 172 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 CDC14AQ9UNH5 594 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 ABCG2Q9UNQ0 655 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 CAMK2AQ9UQM7 478 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 BTBD3Q9Y2F9 522 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 AAR2Q9Y312 384 aaKnown RBP4.17□□□□□ -1.74
ATXN3-227ENST00000554491 POLR3HQ9Y535 204 aaPredicted RBP4.17□□□□□ -1.74
ATXN3-227ENST00000554491 COPG1Q9Y678 874 aaKnown RBP4.17□□□□□ -1.74
ATXN3-227ENST00000554491 LOXHD1Q8IVV2 1947 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 BAZ2AQ9UIF9 1905 aaKnown RBP4.17□□□□□ -1.74
ATXN3-227ENST00000554491 MYH15Q9Y2K3 1946 aa4.17□□□□□ -1.74
ATXN3-227ENST00000554491 ZZEF1O43149 2961 aa4.16□□□□□ -1.74
ATXN3-227ENST00000554491 CACNA1IQ9P0X4 2223 aa4.16□□□□□ -1.74
ATXN3-227ENST00000554491 A0A0J9YYE9 177 aa4.16□□□□□ -1.74
ATXN3-227ENST00000554491 A8MUA0 341 aa4.16□□□□□ -1.74
ATXN3-227ENST00000554491 KDM4EB2RXH2 506 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-227ENST00000554491 TMEM238C9JI98 176 aa4.16□□□□□ -1.74
ATXN3-227ENST00000554491 E7ENX8 843 aa4.16□□□□□ -1.74
ATXN3-227ENST00000554491 NEDD8-MDP1E9PL57 170 aa4.16□□□□□ -1.74
ATXN3-227ENST00000554491 C5orf67F2Z3F1 127 aa4.16□□□□□ -1.74
ATXN3-227ENST00000554491 F5H697 171 aa4.16□□□□□ -1.74
ATXN3-227ENST00000554491 G3V2T6 193 aa4.16□□□□□ -1.74
ATXN3-227ENST00000554491 J3QRK9 145 aa4.16□□□□□ -1.74
ATXN3-227ENST00000554491 SULT1C2O00338 296 aa4.16□□□□□ -1.74
ATXN3-227ENST00000554491 FCHO1O14526 889 aa4.16□□□□□ -1.74
ATXN3-227ENST00000554491 MAGEB2O15479 319 aa4.16□□□□□ -1.74
ATXN3-227ENST00000554491 GYG2O15488 501 aa4.16□□□□□ -1.74
ATXN3-227ENST00000554491 PCDHGA12O60330 932 aa4.16□□□□□ -1.74
ATXN3-227ENST00000554491 CTNSO60931 367 aa4.16□□□□□ -1.74
ATXN3-227ENST00000554491 MITFO75030 526 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-227ENST00000554491 BANF1O75531 89 aa4.16□□□□□ -1.74
ATXN3-227ENST00000554491 RHBDL1O75783 438 aa4.16□□□□□ -1.74
ATXN3-227ENST00000554491 KAT7O95251 611 aa4.16□□□□□ -1.74
ATXN3-227ENST00000554491 MLYCDO95822 493 aa4.16□□□□□ -1.74
ATXN3-227ENST00000554491 ANGPTL1O95841 491 aa4.16□□□□□ -1.74
ATXN3-227ENST00000554491 BCL10O95999 233 aa4.16□□□□□ -1.74
ATXN3-227ENST00000554491 CALCAP01258 141 aa4.16□□□□□ -1.74
ATXN3-227ENST00000554491 TRBC1P01850 177 aa4.16□□□□□ -1.74
ATXN3-227ENST00000554491 ATP1A1P05023 1023 aaKnown RBP4.16□□□□□ -1.74
ATXN3-227ENST00000554491 IGKV2-30P06310 120 aa4.16□□□□□ -1.74
ATXN3-227ENST00000554491 LIPFP07098 398 aa4.16□□□□□ -1.74
ATXN3-227ENST00000554491 HOXC4P09017 264 aaPredicted RBP4.16□□□□□ -1.74
ATXN3-227ENST00000554491 NUDT17P0C025 328 aa4.16□□□□□ -1.74
ATXN3-227ENST00000554491 CTXN2P0C2S0 81 aa4.16□□□□□ -1.74
ATXN3-227ENST00000554491 OR8G3PP0DMU2 310 aa4.16□□□□□ -1.74
ATXN3-227ENST00000554491 MYBP10242 640 aa4.16□□□□□ -1.74
ATXN3-227ENST00000554491 SLC2A1P11166 492 aa4.16□□□□□ -1.74
ATXN3-227ENST00000554491 NR2C1P13056 603 aa4.16□□□□□ -1.74
ATXN3-227ENST00000554491 IL7P13232 177 aa4.16□□□□□ -1.74
ATXN3-227ENST00000554491 ZNF30P17039 623 aa4.16□□□□□ -1.74
ATXN3-227ENST00000554491 CTPS1P17812 591 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms