RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 RMND5BQ96G75 393 aaPredicted RBP8.16□□□□□ -1.1
TDP1-208ENST00000553989 SGCZQ96LD1 299 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 JSRP1Q96MG2 331 aaPredicted RBP8.16□□□□□ -1.1
TDP1-208ENST00000553989 QRFPRQ96P65 431 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 KCNC2Q96PR1 638 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 ROGDIQ9GZN7 287 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 SNX15Q9NRS6 342 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 CCM2LQ9NUG4 571 aaPredicted RBP8.16□□□□□ -1.1
TDP1-208ENST00000553989 DNAJC11Q9NVH1 559 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 PNPOQ9NVS9 261 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 OXSMQ9NWU1 459 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 TUBA8Q9NY65 449 aaPredicted RBP8.16□□□□□ -1.1
TDP1-208ENST00000553989 GPRC5BQ9NZH0 403 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 Q9UFV3 132 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 SLC7A8Q9UHI5 535 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 EDARQ9UNE0 448 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 ACOT9Q9Y305 439 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 FAM215AQ9Y5M1 114 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 PSAT1Q9Y617 370 aa8.16□□□□□ -1.1
TDP1-208ENST00000553989 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.16□□□□□ -1.1
TDP1-208ENST00000553989 HCFC1P51610 2035 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 A0A087X1B8 175 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 TRGV5A0A0B4J1U4 118 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 DPPA5A6NC42 116 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 TRPC5OSA6NMA1 111 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 TMEM229AB2RXF0 380 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 G3V2L1 256 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 CYR61O00622 381 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 HDAC3O15379 428 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 AHCYL1O43865 530 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 NPHS1O60500 1241 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 GLSO94925 669 aaPredicted RBP8.15□□□□□ -1.1
TDP1-208ENST00000553989 IGHG3P01860 377 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 FESP07332 822 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 CCL3P10147 92 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 PCNAP12004 261 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 COX4I1P13073 169 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 GABRA1P14867 456 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 CPN2P22792 545 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 PIGAP37287 484 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 SSR2P43308 183 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 KIR2DL3P43628 341 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 SLC6A12P48065 614 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 HSPA7P48741 367 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 TAS2R39P59534 338 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 DNAJB13P59910 316 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 KLF10Q13118 480 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 TGFBIQ15582 683 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 PAGE2BQ5JRK9 111 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 PRAMEF20Q5VT98 475 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 LIPMQ5VYY2 423 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 ADNP2Q6IQ32 1131 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 ARSKQ6UWY0 536 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 ZYG11AQ6WRX3 759 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 SPATA6LQ8N4H0 392 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 SRFBP1Q8NEF9 429 aaKnown RBP8.15□□□□□ -1.1
TDP1-208ENST00000553989 OR8K3Q8NH51 312 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 GOT1L1Q8NHS2 421 aaPredicted RBP8.15□□□□□ -1.1
TDP1-208ENST00000553989 PTPMT1Q8WUK0 201 aaPredicted RBP8.15□□□□□ -1.1
TDP1-208ENST00000553989 ANKRD49Q8WVL7 239 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 NRG4Q8WWG1 115 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 NINJ1Q92982 152 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 ESAMQ96AP7 390 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 DGAT2Q96PD7 388 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 BTBD9Q96Q07 612 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 CDK15Q96Q40 435 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 F2RL3Q96RI0 385 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 GAL3ST4Q96RP7 486 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 SORT1Q99523 831 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 GPR22Q99680 433 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 ECSITQ9BQ95 431 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 GPATCH1Q9BRR8 931 aaKnown RBP8.15□□□□□ -1.1
TDP1-208ENST00000553989 TMEM79Q9BSE2 394 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 EFCAB11Q9BUY7 163 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 CNPPD1Q9BV87 410 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 KLHL4Q9C0H6 718 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 C20orf27Q9GZN8 174 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 PITHD1Q9GZP4 211 aaPredicted RBP8.15□□□□□ -1.1
TDP1-208ENST00000553989 CLEC4MQ9H2X3 399 aaPredicted RBP8.15□□□□□ -1.1
TDP1-208ENST00000553989 RHOJQ9H4E5 214 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 Q9H521 79 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 NT5DC2Q9H857 520 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 ZNF395Q9H8N7 513 aaPredicted RBP8.15□□□□□ -1.1
TDP1-208ENST00000553989 EFCAB1Q9HAE3 211 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 CD274Q9NZQ7 290 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 C6orf203Q9P0P8 240 aaPredicted RBP8.15□□□□□ -1.1
TDP1-208ENST00000553989 B4GALT7Q9UBV7 327 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 MARCOQ9UEW3 520 aaPredicted RBP8.15□□□□□ -1.1
TDP1-208ENST00000553989 BOKQ9UMX3 212 aaPredicted RBP8.15□□□□□ -1.1
TDP1-208ENST00000553989 ATG4BQ9Y4P1 393 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 CLDN16Q9Y5I7 305 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 ZNF407Q9C0G0 2248 aa8.15□□□□□ -1.1
TDP1-208ENST00000553989 AKAP9Q99996 3911 aa8.15□□□□□ -1.11
TDP1-208ENST00000553989 TACC2O95359 2948 aa8.14□□□□□ -1.11
TDP1-208ENST00000553989 C15orf38-AP3S2A0A0A6YYH1 394 aa8.14□□□□□ -1.11
TDP1-208ENST00000553989 A0A1B0GVC2 190 aa8.14□□□□□ -1.11
TDP1-208ENST00000553989 SAP18O00422 153 aaKnown RBP8.14□□□□□ -1.11
TDP1-208ENST00000553989 RTCAO00442 366 aaKnown RBP8.14□□□□□ -1.11
TDP1-208ENST00000553989 SUSD5O60279 629 aa8.14□□□□□ -1.11
TDP1-208ENST00000553989 HCN1O60741 890 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms