RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 MYBPC3Q14896 1274 aa16.73■□□□□ 0.27
PSEN1-208ENST00000553719 C6orf10Q5SRN2 563 aa16.73■□□□□ 0.27
PSEN1-208ENST00000553719 MFSD12Q6NUT3 480 aa16.73■□□□□ 0.27
PSEN1-208ENST00000553719 HSDL2Q6YN16 418 aa16.73■□□□□ 0.27
PSEN1-208ENST00000553719 TRPM8Q7Z2W7 1104 aa16.73■□□□□ 0.27
PSEN1-208ENST00000553719 GALNT16Q8N428 558 aa16.73■□□□□ 0.27
PSEN1-208ENST00000553719 CLEC1AQ8NC01 280 aa16.73■□□□□ 0.27
PSEN1-208ENST00000553719 C17orf47Q8NEP4 570 aa16.73■□□□□ 0.27
PSEN1-208ENST00000553719 NUP43Q8NFH3 380 aa16.73■□□□□ 0.27
PSEN1-208ENST00000553719 OR5AK3PQ8NH89 298 aa16.73■□□□□ 0.27
PSEN1-208ENST00000553719 NUBPLQ8TB37 319 aa16.73■□□□□ 0.27
PSEN1-208ENST00000553719 ADIPOR1Q96A54 375 aa16.73■□□□□ 0.27
PSEN1-208ENST00000553719 RCN3Q96D15 328 aa16.73■□□□□ 0.27
PSEN1-208ENST00000553719 CMTM5Q96DZ9 223 aa16.73■□□□□ 0.27
PSEN1-208ENST00000553719 NEURL3Q96EH8 262 aa16.73■□□□□ 0.27
PSEN1-208ENST00000553719 WWTR1Q9GZV5 400 aa16.73■□□□□ 0.27
PSEN1-208ENST00000553719 SERHL2Q9H4I8 314 aa16.73■□□□□ 0.27
PSEN1-208ENST00000553719 FOLH1BQ9HBA9 442 aa16.73■□□□□ 0.27
PSEN1-208ENST00000553719 C3orf14Q9HBI5 128 aa16.73■□□□□ 0.27
PSEN1-208ENST00000553719 VAPAQ9P0L0 249 aa16.73■□□□□ 0.27
PSEN1-208ENST00000553719 SNX8Q9Y5X2 465 aa16.73■□□□□ 0.27
PSEN1-208ENST00000553719 CPAMD8Q8IZJ3 1885 aa16.73■□□□□ 0.27
PSEN1-208ENST00000553719 MRASO14807 208 aa16.72■□□□□ 0.27
PSEN1-208ENST00000553719 DNAJB5O75953 348 aa16.72■□□□□ 0.27
PSEN1-208ENST00000553719 KCNH1O95259 989 aa16.72■□□□□ 0.27
PSEN1-208ENST00000553719 HMGN2P05204 90 aaKnown RBP16.72■□□□□ 0.27
PSEN1-208ENST00000553719 SOAT1P35610 550 aa16.72■□□□□ 0.27
PSEN1-208ENST00000553719 SOX11P35716 441 aa16.72■□□□□ 0.27
PSEN1-208ENST00000553719 MAN2A2P49641 1150 aa16.72■□□□□ 0.27
PSEN1-208ENST00000553719 AP2B1P63010 937 aa16.72■□□□□ 0.27
PSEN1-208ENST00000553719 TRMT5Q32P41 509 aaKnown RBP16.72■□□□□ 0.27
PSEN1-208ENST00000553719 C6orf89Q6UWU4 347 aa16.72■□□□□ 0.27
PSEN1-208ENST00000553719 DHDDSQ86SQ9 333 aa16.72■□□□□ 0.27
PSEN1-208ENST00000553719 TRIML2Q8N7C3 387 aa16.72■□□□□ 0.27
PSEN1-208ENST00000553719 MIPOL1Q8TD10 442 aa16.72■□□□□ 0.27
PSEN1-208ENST00000553719 BRIX1Q8TDN6 353 aaKnown RBP16.72■□□□□ 0.27
PSEN1-208ENST00000553719 THOC3Q96J01 351 aaKnown RBP16.72■□□□□ 0.27
PSEN1-208ENST00000553719 MAGED4Q96JG8 741 aa16.72■□□□□ 0.27
PSEN1-208ENST00000553719 CNTNAP3BQ96NU0 1288 aa16.72■□□□□ 0.27
PSEN1-208ENST00000553719 BTBD9Q96Q07 612 aa16.72■□□□□ 0.27
PSEN1-208ENST00000553719 SLC35A5Q9BS91 424 aa16.72■□□□□ 0.27
PSEN1-208ENST00000553719 LMF2Q9BU23 707 aaKnown RBP16.72■□□□□ 0.27
PSEN1-208ENST00000553719 ITPAQ9BY32 194 aa16.72■□□□□ 0.27
PSEN1-208ENST00000553719 CNTNAP3Q9BZ76 1288 aa16.72■□□□□ 0.27
PSEN1-208ENST00000553719 LHPPQ9H008 270 aa16.72■□□□□ 0.27
PSEN1-208ENST00000553719 PRODH2Q9UF12 536 aa16.72■□□□□ 0.27
PSEN1-208ENST00000553719 BCAP29Q9UHQ4 241 aa16.72■□□□□ 0.27
PSEN1-208ENST00000553719 CFL2Q9Y281 166 aa16.72■□□□□ 0.27
PSEN1-208ENST00000553719 ZFAND5O76080 213 aa16.71■□□□□ 0.27
PSEN1-208ENST00000553719 NPPAP01160 153 aa16.71■□□□□ 0.27
PSEN1-208ENST00000553719 CXADRP78310 365 aa16.71■□□□□ 0.27
PSEN1-208ENST00000553719 PSG6Q00889 435 aa16.71■□□□□ 0.27
PSEN1-208ENST00000553719 C8orf82Q6P1X6 216 aaPredicted RBP16.71■□□□□ 0.27
PSEN1-208ENST00000553719 NPSR1Q6W5P4 371 aa16.71■□□□□ 0.27
PSEN1-208ENST00000553719 ZNF621Q6ZSS3 439 aa16.71■□□□□ 0.27
PSEN1-208ENST00000553719 C6orf120Q7Z4R8 191 aa16.71■□□□□ 0.27
PSEN1-208ENST00000553719 LGI4Q8N135 537 aa16.71■□□□□ 0.27
PSEN1-208ENST00000553719 AURKBQ96GD4 344 aaPredicted RBP16.71■□□□□ 0.27
PSEN1-208ENST00000553719 CRELD1Q96HD1 420 aa16.71■□□□□ 0.27
PSEN1-208ENST00000553719 PRORYQ9H606 182 aa16.71■□□□□ 0.27
PSEN1-208ENST00000553719 TPT1P8Q9HAU6 139 aa16.71■□□□□ 0.27
PSEN1-208ENST00000553719 TAGLN3Q9UI15 199 aa16.71■□□□□ 0.27
PSEN1-208ENST00000553719 GPR55Q9Y2T6 319 aaPredicted RBP16.71■□□□□ 0.27
PSEN1-208ENST00000553719 BSNQ9UPA5 3926 aa16.71■□□□□ 0.27
PSEN1-208ENST00000553719 ATMQ13315 3056 aa16.71■□□□□ 0.26
PSEN1-208ENST00000553719 MAN1A2O60476 641 aa16.7■□□□□ 0.26
PSEN1-208ENST00000553719 CBX6O95503 412 aa16.7■□□□□ 0.26
PSEN1-208ENST00000553719 NADKO95544 446 aaPredicted RBP16.7■□□□□ 0.26
PSEN1-208ENST00000553719 CT45A8P0DMV1 189 aa16.7■□□□□ 0.26
PSEN1-208ENST00000553719 CT45A9P0DMV2 189 aa16.7■□□□□ 0.26
PSEN1-208ENST00000553719 T-ENOLP0DO92 83 aa16.7■□□□□ 0.26
PSEN1-208ENST00000553719 ACP2P11117 423 aa16.7■□□□□ 0.26
PSEN1-208ENST00000553719 ITGA3P26006 1051 aa16.7■□□□□ 0.26
PSEN1-208ENST00000553719 TP53BP2Q13625 1128 aa16.7■□□□□ 0.26
PSEN1-208ENST00000553719 SPDYE7PQ495Y7 208 aa16.7■□□□□ 0.26
PSEN1-208ENST00000553719 RUNDC3AQ59EK9 446 aa16.7■□□□□ 0.26
PSEN1-208ENST00000553719 CT45A2Q5DJT8 189 aa16.7■□□□□ 0.26
PSEN1-208ENST00000553719 ZCCHC12Q6PEW1 402 aa16.7■□□□□ 0.26
PSEN1-208ENST00000553719 BHLHB9Q6PI77 547 aa16.7■□□□□ 0.26
PSEN1-208ENST00000553719 HACD2Q6Y1H2 254 aa16.7■□□□□ 0.26
PSEN1-208ENST00000553719 SLC29A4Q7RTT9 530 aa16.7■□□□□ 0.26
PSEN1-208ENST00000553719 TP53INP1Q96A56 240 aa16.7■□□□□ 0.26
PSEN1-208ENST00000553719 LRRC58Q96CX6 371 aa16.7■□□□□ 0.26
PSEN1-208ENST00000553719 C16orf58Q96GQ5 468 aa16.7■□□□□ 0.26
PSEN1-208ENST00000553719 CGREF1Q99674 301 aa16.7■□□□□ 0.26
PSEN1-208ENST00000553719 CPPED1Q9BRF8 314 aaPredicted RBP16.7■□□□□ 0.26
PSEN1-208ENST00000553719 GPATCH1Q9BRR8 931 aaKnown RBP16.7■□□□□ 0.26
PSEN1-208ENST00000553719 DEFB126Q9BYW3 111 aa16.7■□□□□ 0.26
PSEN1-208ENST00000553719 IKZF5Q9H5V7 419 aa16.7■□□□□ 0.26
PSEN1-208ENST00000553719 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.7■□□□□ 0.26
PSEN1-208ENST00000553719 MYOTQ9UBF9 498 aa16.7■□□□□ 0.26
PSEN1-208ENST00000553719 C2orf92A0A1B0GVN3 265 aa16.69■□□□□ 0.26
PSEN1-208ENST00000553719 CCT8L1PA6NM43 557 aa16.69■□□□□ 0.26
PSEN1-208ENST00000553719 TO15178 435 aa16.69■□□□□ 0.26
PSEN1-208ENST00000553719 ZNF354AO60765 605 aaPredicted RBP16.69■□□□□ 0.26
PSEN1-208ENST00000553719 NKX2-2O95096 273 aa16.69■□□□□ 0.26
PSEN1-208ENST00000553719 UNC5CO95185 931 aa16.69■□□□□ 0.26
PSEN1-208ENST00000553719 ANP32DO95626 131 aa16.69■□□□□ 0.26
PSEN1-208ENST00000553719 ITGB2P05107 769 aa16.69■□□□□ 0.26
PSEN1-208ENST00000553719 PPICP45877 212 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms