RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 A0A1W2PQL4 384 aaPredicted RBP6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 SHISA3A0PJX4 238 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 ERAL1O75616 437 aaKnown RBP6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 ZIC2O95409 532 aaPredicted RBP6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 CSF2P04141 144 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 C8orf89P0DMQ9 161 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 DDX5P17844 614 aaKnown RBP6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 SSR2P43308 183 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 GIPRP48546 466 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 CLCNKAP51800 687 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 SNRPNP63162 240 aaKnown RBP6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 DAB2P98082 770 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 CDK5Q00535 292 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 FABP5Q01469 135 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 ALDH6A1Q02252 535 aaKnown RBP6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 MLLT1Q03111 559 aaPredicted RBP6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 KRR1Q13601 381 aaKnown RBP6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 C1DQ13901 141 aaKnown RBP6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 ZNF234Q14588 700 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 TBRG1Q3YBR2 411 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 CLEC12AQ5QGZ9 265 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 RNLSQ5VYX0 342 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 GDPGP1Q6ZNW5 385 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 FAM92BQ6ZTR7 304 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 MRPL43Q8N983 215 aaKnown RBP6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 OR8K5Q8NH50 307 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 OR52P1PQ8NH57 321 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 SUN3Q8TAQ9 357 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 SETD6Q8TBK2 473 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 SLC9A6Q92581 669 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 RGMAQ96B86 450 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 ZG16BQ96DA0 208 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 RNFT2Q96EX2 444 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 CNRIP1Q96F85 164 aaPredicted RBP6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 MSLNLQ96KJ4 702 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 PRRC1Q96M27 445 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 PHOX2BQ99453 314 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 TTYH2Q9BSA4 534 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 BEX2Q9BXY8 128 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 DDX28Q9NUL7 540 aaKnown RBP6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 MALT1Q9UDY8 824 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 CHST2Q9Y4C5 530 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 OR1A2Q9Y585 309 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 NOX1Q9Y5S8 564 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 EDDM13A0A1B0GTR0 161 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 MEIOCA2RUB1 952 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 CPSF4LA6NMK7 179 aaKnown RBP6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 SCAMP1O15126 338 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 HOXC11O43248 304 aaPredicted RBP6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 NCR1O76036 304 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 UBXN7O94888 489 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 LGI1O95970 557 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 IL1AP01583 271 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 HMGN2P05204 90 aaKnown RBP6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 KRT8P05787 483 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 RB1P06400 928 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 LIMS3P0CW19 117 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 LIMS4P0CW20 117 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 BCL6P41182 706 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 WNT4P56705 351 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 CDK3Q00526 305 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 RUNX1T1Q06455 604 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 ELAVL3Q14576 367 aaKnown RBP6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 SNAPC1Q16533 368 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 TMEM52BQ4KMG9 183 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 OR4C11Q6IEV9 310 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 C1orf94Q6P1W5 598 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 TMEM107Q6UX40 140 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 QSOX2Q6ZRP7 698 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 DGLUCYQ7Z3D6 616 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 LRRTM4Q86VH4 590 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 TRIM69Q86WT6 500 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 VRK2Q86Y07 508 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 RAB43Q86YS6 212 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 CAMKK1Q8N5S9 505 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 TMIEQ8NEW7 156 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 WFIKKN2Q8TEU8 576 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 POF1BQ8WVV4 589 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 OTUB2Q96DC9 234 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 FAM46AQ96IP4 442 aaKnown RBP6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 FYTTD1Q96QD9 318 aaKnown RBP6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 KATNB1Q9BVA0 655 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 TRMT61BQ9BVS5 477 aaKnown RBP6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 MCOLN1Q9GZU1 580 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 DDX31Q9H8H2 851 aaKnown RBP6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 MOV10Q9HCE1 1003 aaKnown RBP6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 EQTNQ9NQ60 294 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 SLC35C2Q9NQQ7 365 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 MBNL1Q9NR56 388 aaKnown RBP6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 SEMA4GQ9NTN9 838 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 ACSS1Q9NUB1 689 aaPredicted RBP6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 NPAP1Q9NZP6 1156 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 KLHL20Q9Y2M5 609 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 PLEKHM1Q9Y4G2 1056 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 IRAK3Q9Y616 596 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 SCN3AQ9NY46 2000 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 MYO10Q9HD67 2058 aa6.52□□□□□ -1.37
LINC-ROR-201ENST00000553704 A0A1W2PR48 441 aa6.51□□□□□ -1.37
LINC-ROR-201ENST00000553704 LRIT2A6NDA9 550 aa6.51□□□□□ -1.37
LINC-ROR-201ENST00000553704 IGLON5A6NGN9 336 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms