RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 DNTTP04053 509 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 HMGN2P05204 90 aaKnown RBP12.15□□□□□ -0.46
SHMT2-205ENST00000553474 CD72P21854 359 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 GDI1P31150 447 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 GIPRP48546 466 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 SMSP52788 366 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 KIAA1024LP59773 190 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 RPS15AP62244 130 aaKnown RBP12.15□□□□□ -0.46
SHMT2-205ENST00000553474 CDK5Q00535 292 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 MLLT11Q13015 90 aaPredicted RBP12.15□□□□□ -0.46
SHMT2-205ENST00000553474 RPE65Q16518 533 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 TSTQ16762 297 aaKnown RBP12.15□□□□□ -0.46
SHMT2-205ENST00000553474 TMEM44Q2T9K0 475 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 C2orf27AQ580R0 203 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 SPANXN2Q5MJ10 180 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 PODNL1Q6PEZ8 512 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 SZRD1Q7Z422 152 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 LYSMD2Q8IV50 215 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 NANOGP1Q8N7R0 232 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 ZBTB8BQ8NAP8 495 aaPredicted RBP12.15□□□□□ -0.46
SHMT2-205ENST00000553474 OR4K5Q8NGD3 323 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 OR4D11Q8NGI4 311 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 OR5D16Q8NGK9 328 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 PIK3R3Q92569 461 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 CHFRQ96EP1 664 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 CNRIP1Q96F85 164 aaPredicted RBP12.15□□□□□ -0.46
SHMT2-205ENST00000553474 OR5M11Q96RB7 305 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 CHCHD6Q9BRQ6 235 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 CENPOQ9BU64 300 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 RSPO3Q9BXY4 272 aaPredicted RBP12.15□□□□□ -0.46
SHMT2-205ENST00000553474 C11orf16Q9NQ32 467 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 FBXL12Q9NXK8 326 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 NTMQ9P121 344 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 SERGEFQ9UGK8 458 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 KCNK6Q9Y257 313 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 ZNF780BQ9Y6R6 833 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 A0A1W2PR48 441 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 HAT1O14929 419 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 PROM1O43490 865 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 KIAA0513O60268 411 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 ERAL1O75616 437 aaKnown RBP12.15□□□□□ -0.46
SHMT2-205ENST00000553474 AIFM1O95831 613 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 TP53P04637 393 aaPredicted RBP12.15□□□□□ -0.46
SHMT2-205ENST00000553474 F3P13726 295 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 FUT4P22083 530 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 GRK5P34947 590 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 TIE1P35590 1138 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 IGFALSP35858 605 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 TGFBR1P36897 503 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 KIR2DL1P43626 348 aaPredicted RBP12.15□□□□□ -0.46
SHMT2-205ENST00000553474 DEFA1P59665 94 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 DEFA3P59666 94 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 EFNB1P98172 346 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 ZNF91Q05481 1191 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 PIN1Q13526 163 aaPredicted RBP12.15□□□□□ -0.46
SHMT2-205ENST00000553474 LRRC32Q14392 662 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 ATAD3BQ5T9A4 648 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 SDE2Q6IQ49 451 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 MRGPREQ86SM8 312 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 AMER3Q8N944 861 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 MORN4Q8NDC4 146 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 OR8K5Q8NH50 307 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 GAL3ST3Q96A11 431 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 OPALINQ96PE5 141 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 IL4I1Q96RQ9 567 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 CCDC32Q9BV29 185 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 TRMT61BQ9BVS5 477 aaKnown RBP12.15□□□□□ -0.46
SHMT2-205ENST00000553474 NUAK2Q9H093 628 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 KCNK12Q9HB15 430 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 ISYNA1Q9NPH2 558 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 MAN2C1Q9NTJ4 1040 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 NDUFB11Q9NX14 153 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 KLHL28Q9NXS3 571 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 KLHL3Q9UH77 587 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 SLC13A4Q9UKG4 626 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 PCOLCE2Q9UKZ9 415 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 SLC6A14Q9UN76 642 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 DOLKQ9UPQ8 538 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 ATG4BQ9Y4P1 393 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 SNX11Q9Y5W9 270 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 SNRNP200O75643 2136 aaKnown RBP12.15□□□□□ -0.47
SHMT2-205ENST00000553474 A0A1W2PQU0 124 aa12.14□□□□□ -0.47
SHMT2-205ENST00000553474 FAM227AF5H4B4 570 aa12.14□□□□□ -0.47
SHMT2-205ENST00000553474 BOLA2-SMG1P6H3BVE0 249 aa12.14□□□□□ -0.47
SHMT2-205ENST00000553474 MYL12BO14950 172 aa12.14□□□□□ -0.47
SHMT2-205ENST00000553474 CHRM4P08173 479 aa12.14□□□□□ -0.47
SHMT2-205ENST00000553474 MMP11P24347 488 aa12.14□□□□□ -0.47
SHMT2-205ENST00000553474 PRKAR1BP31321 381 aa12.14□□□□□ -0.47
SHMT2-205ENST00000553474 MAN2A2P49641 1150 aa12.14□□□□□ -0.47
SHMT2-205ENST00000553474 ZP2Q05996 745 aa12.14□□□□□ -0.47
SHMT2-205ENST00000553474 RGS1Q08116 209 aa12.14□□□□□ -0.47
SHMT2-205ENST00000553474 ST3GAL3Q11203 375 aa12.14□□□□□ -0.47
SHMT2-205ENST00000553474 RAB40BQ12829 278 aa12.14□□□□□ -0.47
SHMT2-205ENST00000553474 LASP1Q14847 261 aaKnown RBP12.14□□□□□ -0.47
SHMT2-205ENST00000553474 TRAM2Q15035 370 aa12.14□□□□□ -0.47
SHMT2-205ENST00000553474 GPAT3Q53EU6 434 aa12.14□□□□□ -0.47
SHMT2-205ENST00000553474 C3orf38Q5JPI3 329 aa12.14□□□□□ -0.47
SHMT2-205ENST00000553474 ZER1Q7Z7L7 766 aa12.14□□□□□ -0.47
SHMT2-205ENST00000553474 NRROSQ86YC3 692 aa12.14□□□□□ -0.47
SHMT2-205ENST00000553474 RBM45Q8IUH3 476 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms