RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 ERMP1Q7Z2K6 904 aa16.41■□□□□ 0.22
PSEN1-206ENST00000553447 PATL1Q86TB9 770 aaKnown RBP16.41■□□□□ 0.22
PSEN1-206ENST00000553447 ANKFN1Q8N957 763 aa16.41■□□□□ 0.22
PSEN1-206ENST00000553447 TMEM102Q8N9M5 508 aaPredicted RBP16.41■□□□□ 0.22
PSEN1-206ENST00000553447 PLPP5Q8NEB5 264 aa16.41■□□□□ 0.22
PSEN1-206ENST00000553447 OR52R1Q8NGF1 315 aa16.41■□□□□ 0.22
PSEN1-206ENST00000553447 STT3BQ8TCJ2 826 aa16.41■□□□□ 0.22
PSEN1-206ENST00000553447 ADAMTS15Q8TE58 950 aa16.41■□□□□ 0.22
PSEN1-206ENST00000553447 LRTOMTQ8WZ04 291 aa16.41■□□□□ 0.22
PSEN1-206ENST00000553447 PMEPA1Q969W9 287 aa16.41■□□□□ 0.22
PSEN1-206ENST00000553447 LIN37Q96GY3 246 aaPredicted RBP16.41■□□□□ 0.22
PSEN1-206ENST00000553447 LRFN5Q96NI6 719 aa16.41■□□□□ 0.22
PSEN1-206ENST00000553447 VN1R1Q9GZP7 353 aa16.41■□□□□ 0.22
PSEN1-206ENST00000553447 C14orf105Q9NVL8 296 aa16.41■□□□□ 0.22
PSEN1-206ENST00000553447 ADPRHL2Q9NX46 363 aa16.41■□□□□ 0.22
PSEN1-206ENST00000553447 TCRBV16S1A1N1A0A5B0 115 aa16.4■□□□□ 0.22
PSEN1-206ENST00000553447 MEN1O00255 615 aa16.4■□□□□ 0.22
PSEN1-206ENST00000553447 CASQ2O14958 399 aaPredicted RBP16.4■□□□□ 0.22
PSEN1-206ENST00000553447 TPST1O60507 370 aa16.4■□□□□ 0.22
PSEN1-206ENST00000553447 PGM3O95394 542 aa16.4■□□□□ 0.22
PSEN1-206ENST00000553447 AGR2O95994 175 aa16.4■□□□□ 0.22
PSEN1-206ENST00000553447 IFNA14P01570 189 aa16.4■□□□□ 0.22
PSEN1-206ENST00000553447 ZGLP1P0C6A0 271 aa16.4■□□□□ 0.22
PSEN1-206ENST00000553447 FCGR1AP12314 374 aa16.4■□□□□ 0.22
PSEN1-206ENST00000553447 HOXB6P17509 224 aaKnown RBP16.4■□□□□ 0.22
PSEN1-206ENST00000553447 TNNI3P19429 210 aa16.4■□□□□ 0.22
PSEN1-206ENST00000553447 ITIH1P19827 911 aa16.4■□□□□ 0.22
PSEN1-206ENST00000553447 AGXTP21549 392 aa16.4■□□□□ 0.22
PSEN1-206ENST00000553447 CLDN6P56747 220 aa16.4■□□□□ 0.22
PSEN1-206ENST00000553447 FUT5Q11128 374 aa16.4■□□□□ 0.22
PSEN1-206ENST00000553447 GNA13Q14344 377 aa16.4■□□□□ 0.22
PSEN1-206ENST00000553447 ZNF267Q14586 743 aaPredicted RBP16.4■□□□□ 0.22
PSEN1-206ENST00000553447 RPS26P11Q5JNZ5 115 aaPredicted RBP16.4■□□□□ 0.22
PSEN1-206ENST00000553447 ATAD3BQ5T9A4 648 aa16.4■□□□□ 0.22
PSEN1-206ENST00000553447 DHRS13Q6UX07 377 aa16.4■□□□□ 0.22
PSEN1-206ENST00000553447 RAB11FIP2Q7L804 512 aa16.4■□□□□ 0.22
PSEN1-206ENST00000553447 OVCH1Q7RTY7 1134 aa16.4■□□□□ 0.22
PSEN1-206ENST00000553447 WDR53Q7Z5U6 358 aaPredicted RBP16.4■□□□□ 0.22
PSEN1-206ENST00000553447 LAPTM4BQ86VI4 370 aa16.4■□□□□ 0.22
PSEN1-206ENST00000553447 PRSS58Q8IYP2 241 aa16.4■□□□□ 0.22
PSEN1-206ENST00000553447 CDRT4Q8N9R6 151 aa16.4■□□□□ 0.22
PSEN1-206ENST00000553447 SLC16A11Q8NCK7 471 aa16.4■□□□□ 0.22
PSEN1-206ENST00000553447 DEFB124Q8NES8 71 aa16.4■□□□□ 0.22
PSEN1-206ENST00000553447 TAMM41Q96BW9 452 aa16.4■□□□□ 0.22
PSEN1-206ENST00000553447 SLC35A4Q96G79 324 aa16.4■□□□□ 0.22
PSEN1-206ENST00000553447 DEPDC7Q96QD5 511 aa16.4■□□□□ 0.22
PSEN1-206ENST00000553447 CHID1Q9BWS9 393 aa16.4■□□□□ 0.22
PSEN1-206ENST00000553447 PNO1Q9NRX1 252 aaKnown RBP16.4■□□□□ 0.22
PSEN1-206ENST00000553447 EXD2Q9NVH0 621 aa16.4■□□□□ 0.22
PSEN1-206ENST00000553447 GIN1Q9NXP7 522 aa16.4■□□□□ 0.22
PSEN1-206ENST00000553447 IFT80Q9P2H3 777 aaPredicted RBP16.4■□□□□ 0.22
PSEN1-206ENST00000553447 MKL2Q9ULH7 1088 aa16.4■□□□□ 0.22
PSEN1-206ENST00000553447 LIPT1Q9Y234 373 aa16.4■□□□□ 0.22
PSEN1-206ENST00000553447 KCNE3Q9Y6H6 103 aa16.4■□□□□ 0.22
PSEN1-206ENST00000553447 SYNDIG1LA6NDD5 238 aa16.39■□□□□ 0.21
PSEN1-206ENST00000553447 VSTM2BA6NLU5 285 aa16.39■□□□□ 0.21
PSEN1-206ENST00000553447 C17orf105B2RV13 164 aa16.39■□□□□ 0.21
PSEN1-206ENST00000553447 M0QX08 132 aa16.39■□□□□ 0.21
PSEN1-206ENST00000553447 HRKO00198 91 aa16.39■□□□□ 0.21
PSEN1-206ENST00000553447 SUV39H1O43463 412 aa16.39■□□□□ 0.21
PSEN1-206ENST00000553447 PDE9AO76083 593 aa16.39■□□□□ 0.21
PSEN1-206ENST00000553447 OPN1SWP03999 348 aa16.39■□□□□ 0.21
PSEN1-206ENST00000553447 ALOX5P09917 674 aa16.39■□□□□ 0.21
PSEN1-206ENST00000553447 CDK4P11802 303 aa16.39■□□□□ 0.21
PSEN1-206ENST00000553447 FASP25445 335 aa16.39■□□□□ 0.21
PSEN1-206ENST00000553447 SSTR4P31391 388 aa16.39■□□□□ 0.21
PSEN1-206ENST00000553447 ETV5P41161 510 aa16.39■□□□□ 0.21
PSEN1-206ENST00000553447 CRISP3P54108 245 aa16.39■□□□□ 0.21
PSEN1-206ENST00000553447 RAB15P59190 212 aa16.39■□□□□ 0.21
PSEN1-206ENST00000553447 SELENOWP63302 87 aa16.39■□□□□ 0.21
PSEN1-206ENST00000553447 FUT7Q11130 342 aa16.39■□□□□ 0.21
PSEN1-206ENST00000553447 ZNF155Q12901 538 aaPredicted RBP16.39■□□□□ 0.21
PSEN1-206ENST00000553447 DUSP5Q16690 384 aa16.39■□□□□ 0.21
PSEN1-206ENST00000553447 DCAF12Q5T6F0 453 aa16.39■□□□□ 0.21
PSEN1-206ENST00000553447 PRAMEF8Q5VWM4 474 aa16.39■□□□□ 0.21
PSEN1-206ENST00000553447 PRAMEF7Q5VXH5 474 aa16.39■□□□□ 0.21
PSEN1-206ENST00000553447 LCN10Q6JVE6 187 aa16.39■□□□□ 0.21
PSEN1-206ENST00000553447 HEPHL1Q6MZM0 1159 aa16.39■□□□□ 0.21
PSEN1-206ENST00000553447 HMBOX1Q6NT76 420 aa16.39■□□□□ 0.21
PSEN1-206ENST00000553447 TMEM151BQ8IW70 566 aa16.39■□□□□ 0.21
PSEN1-206ENST00000553447 OR10Q1Q8NGQ4 319 aa16.39■□□□□ 0.21
PSEN1-206ENST00000553447 BBS10Q8TAM1 723 aa16.39■□□□□ 0.21
PSEN1-206ENST00000553447 SLC9A6Q92581 669 aa16.39■□□□□ 0.21
PSEN1-206ENST00000553447 HOXB13Q92826 284 aaPredicted RBP16.39■□□□□ 0.21
PSEN1-206ENST00000553447 CDS1Q92903 461 aa16.39■□□□□ 0.21
PSEN1-206ENST00000553447 FKBP10Q96AY3 582 aa16.39■□□□□ 0.21
PSEN1-206ENST00000553447 HSH2DQ96JZ2 352 aa16.39■□□□□ 0.21
PSEN1-206ENST00000553447 STACQ99469 402 aa16.39■□□□□ 0.21
PSEN1-206ENST00000553447 TREX2Q9BQ50 279 aaPredicted RBP16.39■□□□□ 0.21
PSEN1-206ENST00000553447 CNPPD1Q9BV87 410 aa16.39■□□□□ 0.21
PSEN1-206ENST00000553447 SLC26A1Q9H2B4 701 aa16.39■□□□□ 0.21
PSEN1-206ENST00000553447 PIGUQ9H490 435 aa16.39■□□□□ 0.21
PSEN1-206ENST00000553447 RUBCNLQ9H714 662 aa16.39■□□□□ 0.21
PSEN1-206ENST00000553447 YY1AP1Q9H869 796 aa16.39■□□□□ 0.21
PSEN1-206ENST00000553447 BCL2L10Q9HD36 194 aa16.39■□□□□ 0.21
PSEN1-206ENST00000553447 AGPAT4Q9NRZ5 378 aa16.39■□□□□ 0.21
PSEN1-206ENST00000553447 ERVK-19Q9WJR5 959 aa16.39■□□□□ 0.21
PSEN1-206ENST00000553447 PCNX2A6NKB5 2137 aa16.39■□□□□ 0.21
PSEN1-206ENST00000553447 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.38■□□□□ 0.21
PSEN1-206ENST00000553447 TMEM229AB2RXF0 380 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms