RNA–Protein interactions for RNA: ENST00000553391.2

MTHFD1-203, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-203ENST00000553391 DSPPQ9NZW4 1301 aa8.79□□□□□ -1
MTHFD1-203ENST00000553391 SNRNP200O75643 2136 aaKnown RBP8.78□□□□□ -1
MTHFD1-203ENST00000553391 RANBP2P49792 3224 aaKnown RBP8.78□□□□□ -1
MTHFD1-203ENST00000553391 MDC1Q14676 2089 aaKnown RBP8.78□□□□□ -1
MTHFD1-203ENST00000553391 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 TRBV4-1A0A0J9YWV2 114 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 ZNF860A6NHJ4 632 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 TRIM64BA6NI03 449 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 SGK494L7N484 410 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 SLC1A7O00341 560 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 FAAHO00519 579 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 CASC3O15234 703 aaKnown RBP8.78□□□□□ -1
MTHFD1-203ENST00000553391 FCMRO60667 390 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 CTNSO60931 367 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 NME6O75414 186 aaPredicted RBP8.78□□□□□ -1
MTHFD1-203ENST00000553391 WBP4O75554 376 aaKnown RBP8.78□□□□□ -1
MTHFD1-203ENST00000553391 SEC14L2O76054 403 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 ZIC2O95409 532 aaPredicted RBP8.78□□□□□ -1
MTHFD1-203ENST00000553391 ATP1B1P05026 303 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 H1F0P07305 194 aaKnown RBP8.78□□□□□ -1
MTHFD1-203ENST00000553391 HTR1AP08908 422 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 GIMD1P0DJR0 217 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 ACP2P11117 423 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 GABRB1P18505 474 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 S1PR1P21453 382 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 ACVR2AP27037 513 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 CRISP1P54107 249 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 EMP3P54852 163 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 NUP107P57740 925 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 TEKQ02763 1124 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 DMWDQ09019 674 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 ILKQ13418 452 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 TUBA3CQ13748 450 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 FAM53BQ14153 422 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 GANABQ14697 944 aaKnown RBP8.78□□□□□ -1
MTHFD1-203ENST00000553391 SEC23BQ15437 767 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 NPTX1Q15818 432 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 PRICKLE4Q2TBC4 344 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 FAM214AQ32MH5 1076 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 INAVAQ3KP66 663 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 C14orf28Q4W4Y0 310 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 GPAT3Q53EU6 434 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 DCST1Q5T197 706 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 ATAD3BQ5T9A4 648 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 GARNL3Q5VVW2 1013 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 XAF1Q6GPH4 301 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 CD300LDQ6UXZ3 194 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 B3GNT6Q6ZMB0 384 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 Q6ZPB1 254 aaPredicted RBP8.78□□□□□ -1
MTHFD1-203ENST00000553391 SLC16A11Q8NCK7 471 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 SIMC1Q8NDZ2 872 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 BPIFB6Q8NFQ5 453 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 OR9A4Q8NGU2 314 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 CNIH3Q8TBE1 160 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 PHF10Q8WUB8 498 aaKnown RBP8.78□□□□□ -1
MTHFD1-203ENST00000553391 ZFAND2BQ8WV99 257 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 COL26A1Q96A83 441 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 OTUB1Q96FW1 271 aaPredicted RBP8.78□□□□□ -1
MTHFD1-203ENST00000553391 HSPA12BQ96MM6 686 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 DOK1Q99704 481 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 CCDC3Q9BQI4 270 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 IER2Q9BTL4 223 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 DGCR6LQ9BY27 220 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 SAP130Q9H0E3 1048 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 ANKHQ9HCJ1 492 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 PRDM6Q9NQX0 595 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 PAK1IP1Q9NWT1 392 aaPredicted RBP8.78□□□□□ -1
MTHFD1-203ENST00000553391 UCKL1Q9NWZ5 548 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 ZNF226Q9NYT6 803 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 SEMA5BQ9P283 1151 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 KIF17Q9P2E2 1029 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 ERVK-18Q9QC07 812 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 REV1Q9UBZ9 1251 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 AASSQ9UDR5 926 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 RSL24D1Q9UHA3 163 aaKnown RBP8.78□□□□□ -1
MTHFD1-203ENST00000553391 BLOC1S6Q9UL45 172 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 TMCC3Q9ULS5 477 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 MGAT4BQ9UQ53 548 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 RNF6Q9Y252 685 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 TPRKBQ9Y3C4 175 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 SIT1Q9Y3P8 196 aa8.78□□□□□ -1
MTHFD1-203ENST00000553391 GOLGA4Q13439 2230 aaKnown RBP8.78□□□□□ -1
MTHFD1-203ENST00000553391 FANCMQ8IYD8 2048 aa8.77□□□□□ -1.01
MTHFD1-203ENST00000553391 CCDC163A0A0D9SF12 145 aa8.77□□□□□ -1.01
MTHFD1-203ENST00000553391 A0A1W2PRQ8 180 aa8.77□□□□□ -1.01
MTHFD1-203ENST00000553391 SH3PXD2BA1X283 911 aa8.77□□□□□ -1.01
MTHFD1-203ENST00000553391 BLACEA4D250 179 aa8.77□□□□□ -1.01
MTHFD1-203ENST00000553391 FITM1A5D6W6 292 aa8.77□□□□□ -1.01
MTHFD1-203ENST00000553391 PTGES3LE9PB15 166 aa8.77□□□□□ -1.01
MTHFD1-203ENST00000553391 STK25O00506 426 aa8.77□□□□□ -1.01
MTHFD1-203ENST00000553391 BCAT2O15382 392 aaPredicted RBP8.77□□□□□ -1.01
MTHFD1-203ENST00000553391 KIF1CO43896 1103 aaKnown RBP8.77□□□□□ -1.01
MTHFD1-203ENST00000553391 PCDHGA12O60330 932 aa8.77□□□□□ -1.01
MTHFD1-203ENST00000553391 TPST2O60704 377 aa8.77□□□□□ -1.01
MTHFD1-203ENST00000553391 LDB3O75112 727 aa8.77□□□□□ -1.01
MTHFD1-203ENST00000553391 SOX30O94993 753 aa8.77□□□□□ -1.01
MTHFD1-203ENST00000553391 ANGPTL1O95841 491 aa8.77□□□□□ -1.01
MTHFD1-203ENST00000553391 ALPPP05187 535 aa8.77□□□□□ -1.01
MTHFD1-203ENST00000553391 DCNP07585 359 aaKnown RBP8.77□□□□□ -1.01
MTHFD1-203ENST00000553391 GUSBP08236 651 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms