RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 FGF4P08620 206 aa12.08□□□□□ -0.48
HNRNPC-205ENST00000553300 HOXD4P09016 255 aaPredicted RBP12.08□□□□□ -0.48
HNRNPC-205ENST00000553300 HTR1EP28566 365 aa12.08□□□□□ -0.48
HNRNPC-205ENST00000553300 MAN2A2P49641 1150 aa12.08□□□□□ -0.48
HNRNPC-205ENST00000553300 EMDP50402 254 aa12.08□□□□□ -0.48
HNRNPC-205ENST00000553300 FBXW4P57775 412 aa12.08□□□□□ -0.48
HNRNPC-205ENST00000553300 C2orf80Q0P641 193 aa12.08□□□□□ -0.48
HNRNPC-205ENST00000553300 PCLAFQ15004 111 aa12.08□□□□□ -0.48
HNRNPC-205ENST00000553300 EXOSC7Q15024 291 aaKnown RBP12.08□□□□□ -0.48
HNRNPC-205ENST00000553300 ERCC6LQ2NKX8 1250 aa12.08□□□□□ -0.48
HNRNPC-205ENST00000553300 GXYLT1Q4G148 440 aa12.08□□□□□ -0.48
HNRNPC-205ENST00000553300 TRMT12Q53H54 448 aaKnown RBP12.08□□□□□ -0.48
HNRNPC-205ENST00000553300 ZNF628Q5EBL2 1059 aa12.08□□□□□ -0.48
HNRNPC-205ENST00000553300 PRAMEF20Q5VT98 475 aa12.08□□□□□ -0.48
HNRNPC-205ENST00000553300 FAM71E1Q6IPT2 247 aa12.08□□□□□ -0.48
HNRNPC-205ENST00000553300 ACAD11Q709F0 780 aa12.08□□□□□ -0.48
HNRNPC-205ENST00000553300 SRRM1Q8IYB3 904 aaKnown RBP12.08□□□□□ -0.48
HNRNPC-205ENST00000553300 OR52R1Q8NGF1 315 aa12.08□□□□□ -0.48
HNRNPC-205ENST00000553300 OR5M3Q8NGP4 307 aa12.08□□□□□ -0.48
HNRNPC-205ENST00000553300 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.08□□□□□ -0.48
HNRNPC-205ENST00000553300 EXOSC8Q96B26 276 aaKnown RBP12.08□□□□□ -0.48
HNRNPC-205ENST00000553300 ZNF597Q96LX8 424 aa12.08□□□□□ -0.48
HNRNPC-205ENST00000553300 BBS4Q96RK4 519 aa12.08□□□□□ -0.48
HNRNPC-205ENST00000553300 GATA5Q9BWX5 397 aaPredicted RBP12.08□□□□□ -0.48
HNRNPC-205ENST00000553300 EBPLQ9BY08 206 aa12.08□□□□□ -0.48
HNRNPC-205ENST00000553300 NXF5Q9H1B4 397 aaKnown RBP12.08□□□□□ -0.48
HNRNPC-205ENST00000553300 ZNF703Q9H7S9 590 aaPredicted RBP12.08□□□□□ -0.48
HNRNPC-205ENST00000553300 PROK2Q9HC23 129 aa12.08□□□□□ -0.48
HNRNPC-205ENST00000553300 MYNNQ9NPC7 610 aa12.08□□□□□ -0.48
HNRNPC-205ENST00000553300 MIEF1Q9NQG6 463 aa12.08□□□□□ -0.48
HNRNPC-205ENST00000553300 NPIPA2E9PIF3 369 aa12.07□□□□□ -0.48
HNRNPC-205ENST00000553300 NPIPA3F8WFD2 350 aa12.07□□□□□ -0.48
HNRNPC-205ENST00000553300 TO15178 435 aa12.07□□□□□ -0.48
HNRNPC-205ENST00000553300 ZNHIT1O43257 154 aa12.07□□□□□ -0.48
HNRNPC-205ENST00000553300 PLOD3O60568 738 aa12.07□□□□□ -0.48
HNRNPC-205ENST00000553300 WDR1O75083 606 aa12.07□□□□□ -0.48
HNRNPC-205ENST00000553300 SEC22BO75396 215 aa12.07□□□□□ -0.48
HNRNPC-205ENST00000553300 ABCB1P08183 1280 aaPredicted RBP12.07□□□□□ -0.48
HNRNPC-205ENST00000553300 NEFHP12036 1026 aa12.07□□□□□ -0.48
HNRNPC-205ENST00000553300 PCSK2P16519 638 aa12.07□□□□□ -0.48
HNRNPC-205ENST00000553300 SERPINB5P36952 375 aa12.07□□□□□ -0.48
HNRNPC-205ENST00000553300 DUSP2Q05923 314 aa12.07□□□□□ -0.48
HNRNPC-205ENST00000553300 SNTA1Q13424 505 aa12.07□□□□□ -0.48
HNRNPC-205ENST00000553300 FAM219BQ5XKK7 198 aa12.07□□□□□ -0.48
HNRNPC-205ENST00000553300 NOXRED1Q6NXP6 359 aa12.07□□□□□ -0.48
HNRNPC-205ENST00000553300 FAM180BQ6P0A1 224 aa12.07□□□□□ -0.48
HNRNPC-205ENST00000553300 TMEM64Q6YI46 380 aa12.07□□□□□ -0.48
HNRNPC-205ENST00000553300 FAM9CQ8IZT9 166 aa12.07□□□□□ -0.48
HNRNPC-205ENST00000553300 CA5BP1Q8WTZ4 195 aa12.07□□□□□ -0.48
HNRNPC-205ENST00000553300 ASB5Q8WWX0 329 aa12.07□□□□□ -0.48
HNRNPC-205ENST00000553300 JSRP1Q96MG2 331 aaPredicted RBP12.07□□□□□ -0.48
HNRNPC-205ENST00000553300 RILPQ96NA2 401 aa12.07□□□□□ -0.48
HNRNPC-205ENST00000553300 FAM111AQ96PZ2 611 aa12.07□□□□□ -0.48
HNRNPC-205ENST00000553300 ITPAQ9BY32 194 aa12.07□□□□□ -0.48
HNRNPC-205ENST00000553300 EXO5Q9H790 373 aa12.07□□□□□ -0.48
HNRNPC-205ENST00000553300 C1orf109Q9NX04 203 aa12.07□□□□□ -0.48
HNRNPC-205ENST00000553300 TAS2R9Q9NYW1 312 aa12.07□□□□□ -0.48
HNRNPC-205ENST00000553300 DTX4Q9Y2E6 619 aa12.07□□□□□ -0.48
HNRNPC-205ENST00000553300 GPR55Q9Y2T6 319 aaPredicted RBP12.07□□□□□ -0.48
HNRNPC-205ENST00000553300 CACNA1CQ13936 2221 aa12.07□□□□□ -0.48
HNRNPC-205ENST00000553300 PKDREJQ9NTG1 2253 aa12.07□□□□□ -0.48
HNRNPC-205ENST00000553300 A0A087WV62 115 aa12.06□□□□□ -0.48
HNRNPC-205ENST00000553300 FRG2CA6NGY1 282 aa12.06□□□□□ -0.48
HNRNPC-205ENST00000553300 MYO1GB0I1T2 1018 aa12.06□□□□□ -0.48
HNRNPC-205ENST00000553300 FAM47E-STBD1D6RA91 191 aa12.06□□□□□ -0.48
HNRNPC-205ENST00000553300 GABRA1P14867 456 aa12.06□□□□□ -0.48
HNRNPC-205ENST00000553300 ELAVL4P26378 380 aaKnown RBP12.06□□□□□ -0.48
HNRNPC-205ENST00000553300 ACVR2AP27037 513 aa12.06□□□□□ -0.48
HNRNPC-205ENST00000553300 SOX18P35713 384 aa12.06□□□□□ -0.48
HNRNPC-205ENST00000553300 CASP3P42574 277 aa12.06□□□□□ -0.48
HNRNPC-205ENST00000553300 MASP1P48740 699 aa12.06□□□□□ -0.48
HNRNPC-205ENST00000553300 MRPS35P82673 323 aaKnown RBP12.06□□□□□ -0.48
HNRNPC-205ENST00000553300 PLCXD2Q0VAA5 305 aa12.06□□□□□ -0.48
HNRNPC-205ENST00000553300 DUSP8Q13202 625 aa12.06□□□□□ -0.48
HNRNPC-205ENST00000553300 KIAA0040Q15053 153 aa12.06□□□□□ -0.48
HNRNPC-205ENST00000553300 LTB4RQ15722 352 aa12.06□□□□□ -0.48
HNRNPC-205ENST00000553300 EMC4Q5J8M3 183 aa12.06□□□□□ -0.48
HNRNPC-205ENST00000553300 WLSQ5T9L3 541 aa12.06□□□□□ -0.48
HNRNPC-205ENST00000553300 CLEC6AQ6EIG7 209 aa12.06□□□□□ -0.48
HNRNPC-205ENST00000553300 SLC30A6Q6NXT4 461 aa12.06□□□□□ -0.48
HNRNPC-205ENST00000553300 C3P1Q6ZMU1 363 aa12.06□□□□□ -0.48
HNRNPC-205ENST00000553300 TICAM1Q8IUC6 712 aa12.06□□□□□ -0.48
HNRNPC-205ENST00000553300 CLYBLQ8N0X4 340 aa12.06□□□□□ -0.48
HNRNPC-205ENST00000553300 LIX1Q8N485 282 aa12.06□□□□□ -0.48
HNRNPC-205ENST00000553300 OR9A2Q8NGT5 310 aa12.06□□□□□ -0.48
HNRNPC-205ENST00000553300 TCP10LQ8TDR4 215 aa12.06□□□□□ -0.48
HNRNPC-205ENST00000553300 RND1Q92730 232 aa12.06□□□□□ -0.48
HNRNPC-205ENST00000553300 TMCO6Q96DC7 493 aa12.06□□□□□ -0.48
HNRNPC-205ENST00000553300 DTNBP1Q96EV8 351 aa12.06□□□□□ -0.48
HNRNPC-205ENST00000553300 TMEM41AQ96HV5 264 aa12.06□□□□□ -0.48
HNRNPC-205ENST00000553300 BTBD9Q96Q07 612 aa12.06□□□□□ -0.48
HNRNPC-205ENST00000553300 PARD6BQ9BYG5 372 aa12.06□□□□□ -0.48
HNRNPC-205ENST00000553300 METTL7AQ9H8H3 244 aa12.06□□□□□ -0.48
HNRNPC-205ENST00000553300 LRTM1Q9HBL6 345 aa12.06□□□□□ -0.48
HNRNPC-205ENST00000553300 ACAD8Q9UKU7 415 aa12.06□□□□□ -0.48
HNRNPC-205ENST00000553300 TMED5Q9Y3A6 229 aa12.06□□□□□ -0.48
HNRNPC-205ENST00000553300 CCL27Q9Y4X3 112 aa12.06□□□□□ -0.48
HNRNPC-205ENST00000553300 PHF3Q92576 2039 aaKnown RBP12.06□□□□□ -0.48
HNRNPC-205ENST00000553300 OR6C70A6NIJ9 312 aa12.05□□□□□ -0.48
HNRNPC-205ENST00000553300 LRRC3CA6NJW4 275 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms