RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 GEMIN6Q8WXD5 167 aaKnown RBP18.27■□□□□ 0.52
RBFOX1-215ENST00000553186 TRNT1Q96Q11 434 aaKnown RBP18.27■□□□□ 0.52
RBFOX1-215ENST00000553186 Q9H521 79 aa18.27■□□□□ 0.52
RBFOX1-215ENST00000553186 ADAP2Q9NPF8 381 aa18.27■□□□□ 0.52
RBFOX1-215ENST00000553186 THSD1Q9NS62 852 aa18.27■□□□□ 0.52
RBFOX1-215ENST00000553186 LANCL2Q9NS86 450 aa18.27■□□□□ 0.52
RBFOX1-215ENST00000553186 GIN1Q9NXP7 522 aa18.27■□□□□ 0.52
RBFOX1-215ENST00000553186 NDOR1Q9UHB4 597 aa18.27■□□□□ 0.52
RBFOX1-215ENST00000553186 LIPT1Q9Y234 373 aa18.27■□□□□ 0.52
RBFOX1-215ENST00000553186 SH3GLB1Q9Y371 365 aa18.27■□□□□ 0.52
RBFOX1-215ENST00000553186 KHNYNO15037 678 aaKnown RBP18.27■□□□□ 0.51
RBFOX1-215ENST00000553186 E2F6O75461 281 aa18.27■□□□□ 0.51
RBFOX1-215ENST00000553186 BMP10O95393 424 aa18.27■□□□□ 0.51
RBFOX1-215ENST00000553186 H6PDO95479 791 aa18.27■□□□□ 0.51
RBFOX1-215ENST00000553186 ZNF883P0CG24 379 aa18.27■□□□□ 0.51
RBFOX1-215ENST00000553186 ETS2P15036 469 aa18.27■□□□□ 0.51
RBFOX1-215ENST00000553186 MAOAP21397 527 aa18.27■□□□□ 0.51
RBFOX1-215ENST00000553186 PPP2R2BQ00005 443 aa18.27■□□□□ 0.51
RBFOX1-215ENST00000553186 DAG1Q14118 895 aa18.27■□□□□ 0.51
RBFOX1-215ENST00000553186 YOD1Q5VVQ6 348 aaPredicted RBP18.27■□□□□ 0.51
RBFOX1-215ENST00000553186 VWA5B2Q8N398 1253 aa18.27■□□□□ 0.51
RBFOX1-215ENST00000553186 TFAP2CQ92754 450 aa18.27■□□□□ 0.51
RBFOX1-215ENST00000553186 CCDC74BQ96LY2 380 aa18.27■□□□□ 0.51
RBFOX1-215ENST00000553186 NR1H4Q96RI1 486 aaPredicted RBP18.27■□□□□ 0.51
RBFOX1-215ENST00000553186 DPYSL5Q9BPU6 564 aa18.27■□□□□ 0.51
RBFOX1-215ENST00000553186 OSBPL10Q9BXB5 764 aa18.27■□□□□ 0.51
RBFOX1-215ENST00000553186 SLC38A1Q9H2H9 487 aa18.27■□□□□ 0.51
RBFOX1-215ENST00000553186 FANCEQ9HB96 536 aa18.27■□□□□ 0.51
RBFOX1-215ENST00000553186 R4GN57 208 aa18.27■□□□□ 0.51
RBFOX1-215ENST00000553186 ADAMTS20P59510 1910 aa18.26■□□□□ 0.51
RBFOX1-215ENST00000553186 DSCR3O14972 297 aa18.26■□□□□ 0.51
RBFOX1-215ENST00000553186 SERPINB7O75635 380 aa18.26■□□□□ 0.51
RBFOX1-215ENST00000553186 CBX7O95931 251 aa18.26■□□□□ 0.51
RBFOX1-215ENST00000553186 FESP07332 822 aa18.26■□□□□ 0.51
RBFOX1-215ENST00000553186 ACP2P11117 423 aa18.26■□□□□ 0.51
RBFOX1-215ENST00000553186 MAP3K8P41279 467 aa18.26■□□□□ 0.51
RBFOX1-215ENST00000553186 KCNJ5P48544 419 aa18.26■□□□□ 0.51
RBFOX1-215ENST00000553186 DUSP3P51452 185 aaPredicted RBP18.26■□□□□ 0.51
RBFOX1-215ENST00000553186 DSG2Q14126 1118 aa18.26■□□□□ 0.51
RBFOX1-215ENST00000553186 EXOSC7Q15024 291 aaKnown RBP18.26■□□□□ 0.51
RBFOX1-215ENST00000553186 DUSP5Q16690 384 aa18.26■□□□□ 0.51
RBFOX1-215ENST00000553186 GPAT3Q53EU6 434 aa18.26■□□□□ 0.51
RBFOX1-215ENST00000553186 SHQ1Q6PI26 577 aaKnown RBP18.26■□□□□ 0.51
RBFOX1-215ENST00000553186 GATA6Q92908 595 aa18.26■□□□□ 0.51
RBFOX1-215ENST00000553186 RBM18Q96H35 190 aaKnown RBP18.26■□□□□ 0.51
RBFOX1-215ENST00000553186 ZNF300Q96RE9 604 aaPredicted RBP18.26■□□□□ 0.51
RBFOX1-215ENST00000553186 BTBD2Q9BX70 525 aa18.26■□□□□ 0.51
RBFOX1-215ENST00000553186 SMPD3Q9NY59 655 aaPredicted RBP18.26■□□□□ 0.51
RBFOX1-215ENST00000553186 A0A0G2JPF8 293 aa18.25■□□□□ 0.51
RBFOX1-215ENST00000553186 HNRNPCL2B2RXH8 293 aa18.25■□□□□ 0.51
RBFOX1-215ENST00000553186 HNRNPCL3B7ZW38 293 aa18.25■□□□□ 0.51
RBFOX1-215ENST00000553186 ZIC2O95409 532 aaPredicted RBP18.25■□□□□ 0.51
RBFOX1-215ENST00000553186 HNRNPCL4P0DMR1 293 aa18.25■□□□□ 0.51
RBFOX1-215ENST00000553186 MAPK10P53779 464 aa18.25■□□□□ 0.51
RBFOX1-215ENST00000553186 ACY1Q03154 408 aa18.25■□□□□ 0.51
RBFOX1-215ENST00000553186 DUSP8Q13202 625 aa18.25■□□□□ 0.51
RBFOX1-215ENST00000553186 PRR23CQ6ZRP0 262 aa18.25■□□□□ 0.51
RBFOX1-215ENST00000553186 KRT73Q86Y46 540 aa18.25■□□□□ 0.51
RBFOX1-215ENST00000553186 GALNT12Q8IXK2 581 aa18.25■□□□□ 0.51
RBFOX1-215ENST00000553186 SLC9A6Q92581 669 aa18.25■□□□□ 0.51
RBFOX1-215ENST00000553186 CDS1Q92903 461 aa18.25■□□□□ 0.51
RBFOX1-215ENST00000553186 RIT1Q92963 219 aa18.25■□□□□ 0.51
RBFOX1-215ENST00000553186 OR1F2PQ96R84 312 aa18.25■□□□□ 0.51
RBFOX1-215ENST00000553186 BARD1Q99728 777 aaKnown RBP18.25■□□□□ 0.51
RBFOX1-215ENST00000553186 AMBRA1Q9C0C7 1298 aa18.25■□□□□ 0.51
RBFOX1-215ENST00000553186 SYNDIG1Q9H7V2 258 aa18.25■□□□□ 0.51
RBFOX1-215ENST00000553186 SMURF2Q9HAU4 748 aa18.25■□□□□ 0.51
RBFOX1-215ENST00000553186 UBAP1Q9NZ09 502 aa18.25■□□□□ 0.51
RBFOX1-215ENST00000553186 SEC14L3Q9UDX4 400 aa18.25■□□□□ 0.51
RBFOX1-215ENST00000553186 CDC14AQ9UNH5 594 aa18.25■□□□□ 0.51
RBFOX1-215ENST00000553186 DSPPQ9NZW4 1301 aa18.25■□□□□ 0.51
RBFOX1-215ENST00000553186 A0A1B0GX78 115 aa18.25■□□□□ 0.51
RBFOX1-215ENST00000553186 LNP1A1A4G5 178 aa18.25■□□□□ 0.51
RBFOX1-215ENST00000553186 NTN3O00634 580 aaPredicted RBP18.25■□□□□ 0.51
RBFOX1-215ENST00000553186 AGR2O95994 175 aa18.25■□□□□ 0.51
RBFOX1-215ENST00000553186 PRKACGP22612 351 aa18.25■□□□□ 0.51
RBFOX1-215ENST00000553186 GK3PQ14409 553 aa18.25■□□□□ 0.51
RBFOX1-215ENST00000553186 PDK3Q15120 406 aa18.25■□□□□ 0.51
RBFOX1-215ENST00000553186 CLPPQ16740 277 aaPredicted RBP18.25■□□□□ 0.51
RBFOX1-215ENST00000553186 ATAD3BQ5T9A4 648 aa18.25■□□□□ 0.51
RBFOX1-215ENST00000553186 ZCCHC12Q6PEW1 402 aa18.25■□□□□ 0.51
RBFOX1-215ENST00000553186 HIPK1Q86Z02 1210 aa18.25■□□□□ 0.51
RBFOX1-215ENST00000553186 SLITRK4Q8IW52 837 aa18.25■□□□□ 0.51
RBFOX1-215ENST00000553186 CHERPQ8IWX8 916 aaKnown RBP18.25■□□□□ 0.51
RBFOX1-215ENST00000553186 RASSF5Q8WWW0 418 aa18.25■□□□□ 0.51
RBFOX1-215ENST00000553186 SDCCAG3Q96C92 435 aa18.25■□□□□ 0.51
RBFOX1-215ENST00000553186 PIGUQ9H490 435 aa18.25■□□□□ 0.51
RBFOX1-215ENST00000553186 NECTIN3Q9NQS3 549 aa18.25■□□□□ 0.51
RBFOX1-215ENST00000553186 USE1Q9NZ43 259 aa18.25■□□□□ 0.51
RBFOX1-215ENST00000553186 SAMHD1Q9Y3Z3 626 aaKnown RBP18.25■□□□□ 0.51
RBFOX1-215ENST00000553186 PCDHGB5Q9Y5G0 923 aa18.25■□□□□ 0.51
RBFOX1-215ENST00000553186 SEC16AO15027 2179 aa18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 FAM86C2PA6NEL3 165 aa18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 A8MVJ9 347 aa18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 SNAP29O95721 258 aa18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 HPRP00739 348 aa18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 DNAJA1P31689 397 aaKnown RBP18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 STT3AP46977 705 aa18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 KCNC4Q03721 635 aa18.24■□□□□ 0.51
RBFOX1-215ENST00000553186 CHRNEQ04844 493 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms