RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 ACOX3O15254 700 aa17.04■□□□□ 0.32
PRPF40B-216ENST00000552301 ZIC2O95409 532 aaPredicted RBP17.04■□□□□ 0.32
PRPF40B-216ENST00000552301 CCL3P10147 92 aa17.04■□□□□ 0.32
PRPF40B-216ENST00000552301 KITP10721 976 aa17.04■□□□□ 0.32
PRPF40B-216ENST00000552301 LBPP18428 481 aa17.04■□□□□ 0.32
PRPF40B-216ENST00000552301 PRPS1L1P21108 318 aa17.04■□□□□ 0.32
PRPF40B-216ENST00000552301 EMDP50402 254 aa17.04■□□□□ 0.32
PRPF40B-216ENST00000552301 MANFP55145 182 aaKnown RBP17.04■□□□□ 0.32
PRPF40B-216ENST00000552301 RPP38P78345 283 aaKnown RBP17.04■□□□□ 0.32
PRPF40B-216ENST00000552301 SRSF11Q05519 484 aaKnown RBP17.04■□□□□ 0.32
PRPF40B-216ENST00000552301 DUSP8Q13202 625 aa17.04■□□□□ 0.32
PRPF40B-216ENST00000552301 RPS6KA2Q15349 733 aa17.04■□□□□ 0.32
PRPF40B-216ENST00000552301 ZNF791Q3KP31 576 aaPredicted RBP17.04■□□□□ 0.32
PRPF40B-216ENST00000552301 LYPD8Q6UX82 237 aa17.04■□□□□ 0.32
PRPF40B-216ENST00000552301 TMEM64Q6YI46 380 aa17.04■□□□□ 0.32
PRPF40B-216ENST00000552301 SIMC1Q8NDZ2 872 aa17.04■□□□□ 0.32
PRPF40B-216ENST00000552301 PRR7Q8TB68 274 aa17.04■□□□□ 0.32
PRPF40B-216ENST00000552301 LRRC8CQ8TDW0 803 aa17.04■□□□□ 0.32
PRPF40B-216ENST00000552301 CIDECQ96AQ7 238 aaPredicted RBP17.04■□□□□ 0.32
PRPF40B-216ENST00000552301 HSPBAP1Q96EW2 488 aa17.04■□□□□ 0.32
PRPF40B-216ENST00000552301 MAGED4Q96JG8 741 aa17.04■□□□□ 0.32
PRPF40B-216ENST00000552301 TSPAN10Q9H1Z9 355 aaPredicted RBP17.04■□□□□ 0.32
PRPF40B-216ENST00000552301 MEAF6Q9HAF1 191 aa17.04■□□□□ 0.32
PRPF40B-216ENST00000552301 SEC14L3Q9UDX4 400 aa17.04■□□□□ 0.32
PRPF40B-216ENST00000552301 MAPRE3Q9UPY8 281 aa17.04■□□□□ 0.32
PRPF40B-216ENST00000552301 TENM4Q6N022 2769 aa17.04■□□□□ 0.32
PRPF40B-216ENST00000552301 FRG2CA6NGY1 282 aa17.03■□□□□ 0.32
PRPF40B-216ENST00000552301 NPIPA5E9PKD4 350 aa17.03■□□□□ 0.32
PRPF40B-216ENST00000552301 KLF11O14901 512 aa17.03■□□□□ 0.32
PRPF40B-216ENST00000552301 HDAC3O15379 428 aa17.03■□□□□ 0.32
PRPF40B-216ENST00000552301 UNC5CO95185 931 aa17.03■□□□□ 0.32
PRPF40B-216ENST00000552301 G6PDP11413 515 aa17.03■□□□□ 0.32
PRPF40B-216ENST00000552301 MST1P26927 711 aa17.03■□□□□ 0.32
PRPF40B-216ENST00000552301 RFC3P40938 356 aa17.03■□□□□ 0.32
PRPF40B-216ENST00000552301 PPICP45877 212 aa17.03■□□□□ 0.32
PRPF40B-216ENST00000552301 TDGF1P3P51864 188 aa17.03■□□□□ 0.32
PRPF40B-216ENST00000552301 PPP2R2AP63151 447 aa17.03■□□□□ 0.32
PRPF40B-216ENST00000552301 OCRLQ01968 901 aa17.03■□□□□ 0.32
PRPF40B-216ENST00000552301 RBPJQ06330 500 aa17.03■□□□□ 0.32
PRPF40B-216ENST00000552301 PLCXD2Q0VAA5 305 aa17.03■□□□□ 0.32
PRPF40B-216ENST00000552301 NTRK2Q16620 822 aa17.03■□□□□ 0.32
PRPF40B-216ENST00000552301 EIF2S3LQ2VIR3 472 aaKnown RBP17.03■□□□□ 0.32
PRPF40B-216ENST00000552301 ZNF385BQ569K4 471 aa17.03■□□□□ 0.32
PRPF40B-216ENST00000552301 CPTPQ5TA50 214 aa17.03■□□□□ 0.32
PRPF40B-216ENST00000552301 FHL5Q5TD97 284 aa17.03■□□□□ 0.32
PRPF40B-216ENST00000552301 ZNF551Q7Z340 670 aaPredicted RBP17.03■□□□□ 0.32
PRPF40B-216ENST00000552301 SZRD1Q7Z422 152 aa17.03■□□□□ 0.32
PRPF40B-216ENST00000552301 PRR22Q8IZ63 422 aa17.03■□□□□ 0.32
PRPF40B-216ENST00000552301 OR2M7Q8NG81 312 aa17.03■□□□□ 0.32
PRPF40B-216ENST00000552301 OR10G3Q8NGC4 313 aa17.03■□□□□ 0.32
PRPF40B-216ENST00000552301 ZNF75CPQ92670 426 aaPredicted RBP17.03■□□□□ 0.32
PRPF40B-216ENST00000552301 FAM173AQ9BQD7 235 aa17.03■□□□□ 0.32
PRPF40B-216ENST00000552301 ANKRA2Q9H9E1 313 aa17.03■□□□□ 0.32
PRPF40B-216ENST00000552301 FOLH1BQ9HBA9 442 aa17.03■□□□□ 0.32
PRPF40B-216ENST00000552301 ACSS1Q9NUB1 689 aaPredicted RBP17.03■□□□□ 0.32
PRPF40B-216ENST00000552301 ASIC5Q9NY37 505 aa17.03■□□□□ 0.32
PRPF40B-216ENST00000552301 CNIH4Q9P003 139 aa17.03■□□□□ 0.32
PRPF40B-216ENST00000552301 ATP6V1HQ9UI12 483 aa17.03■□□□□ 0.32
PRPF40B-216ENST00000552301 NPIPA1Q9UND3 350 aa17.03■□□□□ 0.32
PRPF40B-216ENST00000552301 PLOD2O00469 737 aa17.02■□□□□ 0.32
PRPF40B-216ENST00000552301 ERN1O75460 977 aaKnown RBP17.02■□□□□ 0.32
PRPF40B-216ENST00000552301 SASH3O75995 380 aa17.02■□□□□ 0.32
PRPF40B-216ENST00000552301 CNR1P21554 472 aa17.02■□□□□ 0.32
PRPF40B-216ENST00000552301 DRD5P21918 477 aa17.02■□□□□ 0.32
PRPF40B-216ENST00000552301 ABCD3P28288 659 aa17.02■□□□□ 0.32
PRPF40B-216ENST00000552301 SOX18P35713 384 aa17.02■□□□□ 0.32
PRPF40B-216ENST00000552301 KRT20P35900 424 aa17.02■□□□□ 0.32
PRPF40B-216ENST00000552301 FBXW4P57775 412 aa17.02■□□□□ 0.32
PRPF40B-216ENST00000552301 KCNJ2P63252 427 aa17.02■□□□□ 0.32
PRPF40B-216ENST00000552301 PSPHP78330 225 aa17.02■□□□□ 0.32
PRPF40B-216ENST00000552301 ZNHIT3Q15649 155 aaPredicted RBP17.02■□□□□ 0.32
PRPF40B-216ENST00000552301 KRTCAP3Q53RY4 240 aa17.02■□□□□ 0.32
PRPF40B-216ENST00000552301 PRAMEF20Q5VT98 475 aa17.02■□□□□ 0.32
PRPF40B-216ENST00000552301 LRRC34Q8IZ02 419 aa17.02■□□□□ 0.32
PRPF40B-216ENST00000552301 SLC34A3Q8N130 599 aa17.02■□□□□ 0.32
PRPF40B-216ENST00000552301 FBXW8Q8N3Y1 598 aa17.02■□□□□ 0.32
PRPF40B-216ENST00000552301 NATD1Q8N6N6 113 aa17.02■□□□□ 0.32
PRPF40B-216ENST00000552301 ZFP62Q8NB50 900 aaPredicted RBP17.02■□□□□ 0.32
PRPF40B-216ENST00000552301 OR7A2PQ8NGA2 310 aa17.02■□□□□ 0.32
PRPF40B-216ENST00000552301 PAQR8Q8TEZ7 354 aa17.02■□□□□ 0.32
PRPF40B-216ENST00000552301 DIO2Q92813 273 aa17.02■□□□□ 0.32
PRPF40B-216ENST00000552301 OMA1Q96E52 524 aa17.02■□□□□ 0.32
PRPF40B-216ENST00000552301 ELP4Q96EB1 424 aa17.02■□□□□ 0.32
PRPF40B-216ENST00000552301 GPR137Q96N19 417 aa17.02■□□□□ 0.32
PRPF40B-216ENST00000552301 DEPPQ9NTK1 212 aa17.02■□□□□ 0.32
PRPF40B-216ENST00000552301 INTS9Q9NV88 658 aaKnown RBP17.02■□□□□ 0.32
PRPF40B-216ENST00000552301 C19orf53Q9UNZ5 99 aaPredicted RBP17.02■□□□□ 0.32
PRPF40B-216ENST00000552301 OR10H1Q9Y4A9 318 aa17.02■□□□□ 0.32
PRPF40B-216ENST00000552301 SETXQ7Z333 2677 aaKnown RBP17.01■□□□□ 0.31
PRPF40B-216ENST00000552301 UQCRHLA0A096LP55 91 aa17.01■□□□□ 0.31
PRPF40B-216ENST00000552301 A0A0G2JMM0 328 aa17.01■□□□□ 0.31
PRPF40B-216ENST00000552301 A0A1W2PPB8 328 aa17.01■□□□□ 0.31
PRPF40B-216ENST00000552301 A0A1W2PRS3 328 aa17.01■□□□□ 0.31
PRPF40B-216ENST00000552301 KIR3DP1A8MWS1 328 aa17.01■□□□□ 0.31
PRPF40B-216ENST00000552301 PPM1BO75688 479 aa17.01■□□□□ 0.31
PRPF40B-216ENST00000552301 IFI6P09912 130 aa17.01■□□□□ 0.31
PRPF40B-216ENST00000552301 NAGAP17050 411 aa17.01■□□□□ 0.31
PRPF40B-216ENST00000552301 DNASE1L1P49184 302 aa17.01■□□□□ 0.31
PRPF40B-216ENST00000552301 KCNK10P57789 538 aa17.01■□□□□ 0.31
PRPF40B-216ENST00000552301 TBCELQ5QJ74 424 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms