RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 GASTP01350 101 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 SNRPNP63162 240 aaKnown RBP9.36□□□□□ -0.91
RAB5B-206ENST00000549505 RACK1P63244 317 aaKnown RBP9.36□□□□□ -0.91
RAB5B-206ENST00000549505 SEC23BQ15437 767 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 C9orf43Q8TAL5 461 aaPredicted RBP9.36□□□□□ -0.91
RAB5B-206ENST00000549505 CNIH3Q8TBE1 160 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 DIO2Q92813 273 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 ZNF578Q96N58 590 aaPredicted RBP9.36□□□□□ -0.91
RAB5B-206ENST00000549505 CD180Q99467 661 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 LMF2Q9BU23 707 aaKnown RBP9.36□□□□□ -0.91
RAB5B-206ENST00000549505 MTHFD2LQ9H903 347 aaPredicted RBP9.36□□□□□ -0.91
RAB5B-206ENST00000549505 ERVMER34-1Q9H9K5 563 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 ACOT13Q9NPJ3 140 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 C5AR2Q9P296 337 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 MOSPD1Q9UJG1 213 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 SLC9A8Q9Y2E8 581 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 COL5A1P20908 1838 aaPredicted RBP9.36□□□□□ -0.91
RAB5B-206ENST00000549505 J3KTA2 159 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 SLC28A2O43868 658 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 ZIC2O95409 532 aaPredicted RBP9.36□□□□□ -0.91
RAB5B-206ENST00000549505 WNT1P04628 370 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 CDK1P06493 297 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 PORP16435 677 aaPredicted RBP9.36□□□□□ -0.91
RAB5B-206ENST00000549505 YAP1P46937 504 aaKnown RBP9.36□□□□□ -0.91
RAB5B-206ENST00000549505 OR1E2P47887 323 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 MASP1P48740 699 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 CDK5Q00535 292 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 IL5RAQ01344 420 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 FAM53BQ14153 422 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 CTF1Q16619 201 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 PRICKLE4Q2TBC4 344 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 FRRS1Q6ZNA5 592 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 GALNT5Q7Z7M9 940 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 CLVS1Q8IUQ0 354 aaPredicted RBP9.36□□□□□ -0.91
RAB5B-206ENST00000549505 ZDHHC1Q8WTX9 485 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 ANKRD9Q96BM1 317 aaPredicted RBP9.36□□□□□ -0.91
RAB5B-206ENST00000549505 DTNBP1Q96EV8 351 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 SLC35A4Q96G79 324 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 TCTN2Q96GX1 697 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.36□□□□□ -0.91
RAB5B-206ENST00000549505 UCK2Q9BZX2 261 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 TCEAL2Q9H3H9 227 aaPredicted RBP9.36□□□□□ -0.91
RAB5B-206ENST00000549505 CDC14AQ9UNH5 594 aa9.36□□□□□ -0.91
RAB5B-206ENST00000549505 LOC105369274A0A096LPK9 316 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 LOC102723532A0A0G2JNH3 316 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 H3BQ06 376 aaPredicted RBP9.35□□□□□ -0.91
RAB5B-206ENST00000549505 RGS10O43665 173 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 ATE1O95260 518 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 GPR75O95800 540 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 POLR2CP19387 275 aaPredicted RBP9.35□□□□□ -0.91
RAB5B-206ENST00000549505 GSTM3P21266 225 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 GSSP48637 474 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 RGS19P49795 217 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 RPS26P62854 115 aaKnown RBP9.35□□□□□ -0.91
RAB5B-206ENST00000549505 EEF1A1P68104 462 aaKnown RBP9.35□□□□□ -0.91
RAB5B-206ENST00000549505 PPP1R8Q12972 351 aaKnown RBP9.35□□□□□ -0.91
RAB5B-206ENST00000549505 ELOCQ15369 112 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 FAM214AQ32MH5 1076 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 MEDAGQ5VYS4 303 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 KLHL35Q6PF15 583 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 CCDC116Q8IYX3 515 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 OR4N4Q8N0Y3 316 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 OR7G2Q8NG99 324 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 MYDGFQ969H8 173 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 CRELD1Q96HD1 420 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 SHDQ96IW2 340 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 CSF3RQ99062 836 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 ZNF556Q9HAH1 456 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 LMAN1LQ9HAT1 526 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 ANKHQ9HCJ1 492 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 SEC14L3Q9UDX4 400 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 MKLN1Q9UL63 735 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 SNX5Q9Y5X3 404 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 CSNK1G3Q9Y6M4 447 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 TRBV4-1A0A0J9YWV2 114 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 OR5F1O95221 314 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 SLC35E2P0CK97 266 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 TNFRSF1BP20333 461 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 CPN2P22792 545 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 UGT2B10P36537 528 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 CAPZBP47756 277 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 NXPH1P58417 271 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 NFATC3Q12968 1075 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 DECR1Q16698 335 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 ANGPTL8Q6UXH0 198 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 GKN2Q86XP6 184 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 GRAMD2AQ8IUY3 354 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 LACC1Q8IV20 430 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 CCDC103Q8IW40 242 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 TRIM48Q8IWZ4 208 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 SPEM1Q8N4L4 309 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 C19orf47Q8N9M1 422 aaKnown RBP9.35□□□□□ -0.91
RAB5B-206ENST00000549505 TSTD1Q8NFU3 115 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 OR9A2Q8NGT5 310 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 RAB8BQ92930 207 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 RERGQ96A58 199 aaPredicted RBP9.35□□□□□ -0.91
RAB5B-206ENST00000549505 COL21A1Q96P44 957 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 ERVK-18Q9QC07 812 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 FBXL21Q9UKT6 434 aa9.35□□□□□ -0.91
RAB5B-206ENST00000549505 FBXW2Q9UKT8 454 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms