RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 SPRED3Q2MJR0 410 aa11.15□□□□□ -0.62
DDX54-206ENST00000549271 GGTA1PQ4G0N0 100 aa11.15□□□□□ -0.62
DDX54-206ENST00000549271 TEX35Q5T0J7 233 aa11.15□□□□□ -0.62
DDX54-206ENST00000549271 FRG2Q64ET8 278 aa11.15□□□□□ -0.62
DDX54-206ENST00000549271 LETMD1Q6P1Q0 360 aa11.15□□□□□ -0.62
DDX54-206ENST00000549271 MILR1Q7Z6M3 343 aa11.15□□□□□ -0.62
DDX54-206ENST00000549271 OR4N5Q8IXE1 308 aa11.15□□□□□ -0.62
DDX54-206ENST00000549271 ST13P4Q8IZP2 240 aaPredicted RBP11.15□□□□□ -0.62
DDX54-206ENST00000549271 OR4F6Q8NGB9 312 aa11.15□□□□□ -0.62
DDX54-206ENST00000549271 ACMSDQ8TDX5 336 aa11.15□□□□□ -0.62
DDX54-206ENST00000549271 UCN3Q969E3 161 aa11.15□□□□□ -0.62
DDX54-206ENST00000549271 PERPQ96FX8 193 aa11.15□□□□□ -0.62
DDX54-206ENST00000549271 RBM18Q96H35 190 aaKnown RBP11.15□□□□□ -0.62
DDX54-206ENST00000549271 FRG2BQ96QU4 278 aa11.15□□□□□ -0.62
DDX54-206ENST00000549271 PELOQ9BRX2 385 aaKnown RBP11.15□□□□□ -0.62
DDX54-206ENST00000549271 RPF2Q9H7B2 306 aaKnown RBP11.15□□□□□ -0.62
DDX54-206ENST00000549271 PROK2Q9HC23 129 aa11.15□□□□□ -0.62
DDX54-206ENST00000549271 PRM3Q9NNZ6 103 aa11.15□□□□□ -0.62
DDX54-206ENST00000549271 PSMC3IPQ9P2W1 217 aaPredicted RBP11.15□□□□□ -0.62
DDX54-206ENST00000549271 TBK1Q9UHD2 729 aa11.15□□□□□ -0.62
DDX54-206ENST00000549271 PHF11Q9UIL8 331 aa11.15□□□□□ -0.62
DDX54-206ENST00000549271 CHCHD2Q9Y6H1 151 aaPredicted RBP11.15□□□□□ -0.62
DDX54-206ENST00000549271 A0A1W2PR48 441 aa11.14□□□□□ -0.63
DDX54-206ENST00000549271 ANKRD33BA6NCL7 494 aa11.14□□□□□ -0.63
DDX54-206ENST00000549271 LRRC3CA6NJW4 275 aa11.14□□□□□ -0.63
DDX54-206ENST00000549271 OR6C76A6NM76 312 aa11.14□□□□□ -0.63
DDX54-206ENST00000549271 PRKRAO75569 313 aaKnown RBP11.14□□□□□ -0.63
DDX54-206ENST00000549271 RFPL3SP0C7P2 107 aa11.14□□□□□ -0.63
DDX54-206ENST00000549271 ALOX15P16050 662 aaPredicted RBP11.14□□□□□ -0.63
DDX54-206ENST00000549271 SERPINB3P29508 390 aa11.14□□□□□ -0.63
DDX54-206ENST00000549271 TLX1P31314 330 aaPredicted RBP11.14□□□□□ -0.63
DDX54-206ENST00000549271 WNT3P56703 355 aa11.14□□□□□ -0.63
DDX54-206ENST00000549271 HERVK_113P63132 956 aa11.14□□□□□ -0.63
DDX54-206ENST00000549271 PHEXP78562 749 aa11.14□□□□□ -0.63
DDX54-206ENST00000549271 TNFRSF17Q02223 184 aa11.14□□□□□ -0.63
DDX54-206ENST00000549271 CLCQ05315 142 aa11.14□□□□□ -0.63
DDX54-206ENST00000549271 ACSF3Q4G176 576 aaPredicted RBP11.14□□□□□ -0.63
DDX54-206ENST00000549271 ZNF678Q5SXM1 525 aa11.14□□□□□ -0.63
DDX54-206ENST00000549271 DGAT2L6Q6ZPD8 337 aa11.14□□□□□ -0.63
DDX54-206ENST00000549271 LCA5Q86VQ0 697 aa11.14□□□□□ -0.63
DDX54-206ENST00000549271 LACC1Q8IV20 430 aa11.14□□□□□ -0.63
DDX54-206ENST00000549271 PPP1R14CQ8TAE6 165 aa11.14□□□□□ -0.63
DDX54-206ENST00000549271 NEIL3Q8TAT5 605 aa11.14□□□□□ -0.63
DDX54-206ENST00000549271 TRPC4APQ8TEL6 797 aa11.14□□□□□ -0.63
DDX54-206ENST00000549271 SERPINI1Q99574 410 aa11.14□□□□□ -0.63
DDX54-206ENST00000549271 CENPKQ9BS16 269 aa11.14□□□□□ -0.63
DDX54-206ENST00000549271 ERVK-6Q9BXR3 956 aa11.14□□□□□ -0.63
DDX54-206ENST00000549271 ANKZF1Q9H8Y5 726 aa11.14□□□□□ -0.63
DDX54-206ENST00000549271 FARSBQ9NSD9 589 aaKnown RBP11.14□□□□□ -0.63
DDX54-206ENST00000549271 CNOT11Q9UKZ1 510 aaKnown RBP11.14□□□□□ -0.63
DDX54-206ENST00000549271 EMCNQ9ULC0 261 aa11.14□□□□□ -0.63
DDX54-206ENST00000549271 NPFFR2Q9Y5X5 522 aa11.14□□□□□ -0.63
DDX54-206ENST00000549271 HRKO00198 91 aa11.13□□□□□ -0.63
DDX54-206ENST00000549271 PGRMC2O15173 223 aa11.13□□□□□ -0.63
DDX54-206ENST00000549271 SEMA3DO95025 777 aa11.13□□□□□ -0.63
DDX54-206ENST00000549271 GPR75O95800 540 aa11.13□□□□□ -0.63
DDX54-206ENST00000549271 OTCP00480 354 aa11.13□□□□□ -0.63
DDX54-206ENST00000549271 PDYNP01213 254 aa11.13□□□□□ -0.63
DDX54-206ENST00000549271 IL2RAP01589 272 aa11.13□□□□□ -0.63
DDX54-206ENST00000549271 GBAP04062 536 aa11.13□□□□□ -0.63
DDX54-206ENST00000549271 GSTA1P08263 222 aa11.13□□□□□ -0.63
DDX54-206ENST00000549271 FAM58BPP0C7Q3 252 aa11.13□□□□□ -0.63
DDX54-206ENST00000549271 TAC1P20366 129 aa11.13□□□□□ -0.63
DDX54-206ENST00000549271 IMPDH1P20839 514 aa11.13□□□□□ -0.63
DDX54-206ENST00000549271 ATP5F1P24539 256 aaPredicted RBP11.13□□□□□ -0.63
DDX54-206ENST00000549271 ARL1P40616 181 aaPredicted RBP11.13□□□□□ -0.63
DDX54-206ENST00000549271 BUD31P41223 144 aaPredicted RBP11.13□□□□□ -0.63
DDX54-206ENST00000549271 PRKAA2P54646 552 aa11.13□□□□□ -0.63
DDX54-206ENST00000549271 SLC37A1P57057 533 aa11.13□□□□□ -0.63
DDX54-206ENST00000549271 KCNJ2P63252 427 aa11.13□□□□□ -0.63
DDX54-206ENST00000549271 EBPQ15125 230 aaKnown RBP11.13□□□□□ -0.63
DDX54-206ENST00000549271 NTRK2Q16620 822 aa11.13□□□□□ -0.63
DDX54-206ENST00000549271 SGO1Q5FBB7 561 aa11.13□□□□□ -0.63
DDX54-206ENST00000549271 TBCELQ5QJ74 424 aa11.13□□□□□ -0.63
DDX54-206ENST00000549271 HEPHL1Q6MZM0 1159 aa11.13□□□□□ -0.63
DDX54-206ENST00000549271 SLC29A4Q7RTT9 530 aa11.13□□□□□ -0.63
DDX54-206ENST00000549271 TDRPQ86YL5 185 aa11.13□□□□□ -0.63
DDX54-206ENST00000549271 ZNF441Q8N8Z8 693 aa11.13□□□□□ -0.63
DDX54-206ENST00000549271 SREK1Q8WXA9 508 aaKnown RBP11.13□□□□□ -0.63
DDX54-206ENST00000549271 TP53INP1Q96A56 240 aa11.13□□□□□ -0.63
DDX54-206ENST00000549271 PPWD1Q96BP3 646 aaKnown RBP11.13□□□□□ -0.63
DDX54-206ENST00000549271 TMEM237Q96Q45 408 aa11.13□□□□□ -0.63
DDX54-206ENST00000549271 GSX2Q9BZM3 304 aa11.13□□□□□ -0.63
DDX54-206ENST00000549271 WWTR1Q9GZV5 400 aa11.13□□□□□ -0.63
DDX54-206ENST00000549271 EXO5Q9H790 373 aa11.13□□□□□ -0.63
DDX54-206ENST00000549271 LYARQ9NX58 379 aaKnown RBP11.13□□□□□ -0.63
DDX54-206ENST00000549271 CR1P17927 2039 aa11.13□□□□□ -0.63
DDX54-206ENST00000549271 SH3D21A4FU49 640 aa11.12□□□□□ -0.63
DDX54-206ENST00000549271 GLOD5A6NK44 160 aa11.12□□□□□ -0.63
DDX54-206ENST00000549271 AHRRA9YTQ3 701 aa11.12□□□□□ -0.63
DDX54-206ENST00000549271 G3V2L1 256 aa11.12□□□□□ -0.63
DDX54-206ENST00000549271 PHF1O43189 567 aaPredicted RBP11.12□□□□□ -0.63
DDX54-206ENST00000549271 TRIM3O75382 744 aaPredicted RBP11.12□□□□□ -0.63
DDX54-206ENST00000549271 SUPT7LO94864 414 aa11.12□□□□□ -0.63
DDX54-206ENST00000549271 OR4F21O95013 312 aa11.12□□□□□ -0.63
DDX54-206ENST00000549271 AIFM1O95831 613 aa11.12□□□□□ -0.63
DDX54-206ENST00000549271 CLPSP04118 112 aa11.12□□□□□ -0.63
DDX54-206ENST00000549271 SLC35E2P0CK97 266 aa11.12□□□□□ -0.63
DDX54-206ENST00000549271 ERVK-8P63133 956 aa11.12□□□□□ -0.63
DDX54-206ENST00000549271 DMTNQ08495 405 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms