RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 MANBAO00462 879 aa15.88■□□□□ 0.13
CHMP1A-205ENST00000548650 DVL2O14641 736 aa15.88■□□□□ 0.13
CHMP1A-205ENST00000548650 GNB5O14775 395 aa15.88■□□□□ 0.13
CHMP1A-205ENST00000548650 SNPHO15079 494 aa15.88■□□□□ 0.13
CHMP1A-205ENST00000548650 ACOX3O15254 700 aa15.88■□□□□ 0.13
CHMP1A-205ENST00000548650 ABHD2P08910 425 aa15.88■□□□□ 0.13
CHMP1A-205ENST00000548650 HSD3B1P14060 373 aa15.88■□□□□ 0.13
CHMP1A-205ENST00000548650 PCSK2P16519 638 aa15.88■□□□□ 0.13
CHMP1A-205ENST00000548650 HSD3B2P26439 372 aa15.88■□□□□ 0.13
CHMP1A-205ENST00000548650 DNAJA1P31689 397 aaKnown RBP15.88■□□□□ 0.13
CHMP1A-205ENST00000548650 TIMP3P35625 211 aa15.88■□□□□ 0.13
CHMP1A-205ENST00000548650 DEKP35659 375 aaKnown RBP15.88■□□□□ 0.13
CHMP1A-205ENST00000548650 HSD17B3P37058 310 aa15.88■□□□□ 0.13
CHMP1A-205ENST00000548650 PTGDSP41222 190 aa15.88■□□□□ 0.13
CHMP1A-205ENST00000548650 ASCL1P50553 236 aa15.88■□□□□ 0.13
CHMP1A-205ENST00000548650 TRA2BP62995 288 aaKnown RBP15.88■□□□□ 0.13
CHMP1A-205ENST00000548650 MRPS35P82673 323 aaKnown RBP15.88■□□□□ 0.13
CHMP1A-205ENST00000548650 PLCXD2Q0VAA5 305 aa15.88■□□□□ 0.13
CHMP1A-205ENST00000548650 CSTF3Q12996 717 aaKnown RBP15.88■□□□□ 0.13
CHMP1A-205ENST00000548650 FBXL19-AS1Q494R0 122 aa15.88■□□□□ 0.13
CHMP1A-205ENST00000548650 TRMT12Q53H54 448 aaKnown RBP15.88■□□□□ 0.13
CHMP1A-205ENST00000548650 UNC50Q53HI1 259 aa15.88■□□□□ 0.13
CHMP1A-205ENST00000548650 WIPI1Q5MNZ9 446 aaPredicted RBP15.88■□□□□ 0.13
CHMP1A-205ENST00000548650 ZNF678Q5SXM1 525 aa15.88■□□□□ 0.13
CHMP1A-205ENST00000548650 ANGPTL8Q6UXH0 198 aa15.88■□□□□ 0.13
CHMP1A-205ENST00000548650 ZZZ3Q8IYH5 903 aa15.88■□□□□ 0.13
CHMP1A-205ENST00000548650 PM20D2Q8IYS1 436 aa15.88■□□□□ 0.13
CHMP1A-205ENST00000548650 MNS1Q8NEH6 495 aa15.88■□□□□ 0.13
CHMP1A-205ENST00000548650 OR52R1Q8NGF1 315 aa15.88■□□□□ 0.13
CHMP1A-205ENST00000548650 HSPBAP1Q96EW2 488 aa15.88■□□□□ 0.13
CHMP1A-205ENST00000548650 LCORQ96JN0 433 aaPredicted RBP15.88■□□□□ 0.13
CHMP1A-205ENST00000548650 NODALQ96S42 347 aa15.88■□□□□ 0.13
CHMP1A-205ENST00000548650 FAIM2Q9BWQ8 316 aa15.88■□□□□ 0.13
CHMP1A-205ENST00000548650 OSBPL11Q9BXB4 747 aa15.88■□□□□ 0.13
CHMP1A-205ENST00000548650 GALNT9Q9HCQ5 603 aa15.88■□□□□ 0.13
CHMP1A-205ENST00000548650 EHD3Q9NZN3 535 aa15.88■□□□□ 0.13
CHMP1A-205ENST00000548650 TMEM216Q9P0N5 145 aa15.88■□□□□ 0.13
CHMP1A-205ENST00000548650 HEY2Q9UBP5 337 aa15.88■□□□□ 0.13
CHMP1A-205ENST00000548650 BCAP29Q9UHQ4 241 aa15.88■□□□□ 0.13
CHMP1A-205ENST00000548650 PRRC2AP48634 2157 aaKnown RBP15.87■□□□□ 0.13
CHMP1A-205ENST00000548650 CDH16O75309 829 aa15.87■□□□□ 0.13
CHMP1A-205ENST00000548650 CTAG2O75638 210 aa15.87■□□□□ 0.13
CHMP1A-205ENST00000548650 RHOXF2BP0C7M4 288 aa15.87■□□□□ 0.13
CHMP1A-205ENST00000548650 CTAGE8P0CG41 777 aa15.87■□□□□ 0.13
CHMP1A-205ENST00000548650 CHN1P15882 459 aa15.87■□□□□ 0.13
CHMP1A-205ENST00000548650 BMP7P18075 431 aa15.87■□□□□ 0.13
CHMP1A-205ENST00000548650 ALDH9A1P49189 494 aa15.87■□□□□ 0.13
CHMP1A-205ENST00000548650 EMDP50402 254 aa15.87■□□□□ 0.13
CHMP1A-205ENST00000548650 HTR6P50406 440 aa15.87■□□□□ 0.13
CHMP1A-205ENST00000548650 ZNF136P52737 540 aa15.87■□□□□ 0.13
CHMP1A-205ENST00000548650 RASA2Q15283 850 aa15.87■□□□□ 0.13
CHMP1A-205ENST00000548650 GLE1Q53GS7 698 aaKnown RBP15.87■□□□□ 0.13
CHMP1A-205ENST00000548650 ZNF628Q5EBL2 1059 aa15.87■□□□□ 0.13
CHMP1A-205ENST00000548650 NSUN5P2Q63ZY6 315 aa15.87■□□□□ 0.13
CHMP1A-205ENST00000548650 TIFABQ6ZNK6 161 aa15.87■□□□□ 0.13
CHMP1A-205ENST00000548650 CTAGE4Q8IX94 777 aa15.87■□□□□ 0.13
CHMP1A-205ENST00000548650 FAM83FQ8NEG4 500 aaPredicted RBP15.87■□□□□ 0.13
CHMP1A-205ENST00000548650 ZNF675Q8TD23 568 aa15.87■□□□□ 0.13
CHMP1A-205ENST00000548650 ZNF592Q92610 1267 aa15.87■□□□□ 0.13
CHMP1A-205ENST00000548650 ACPTQ9BZG2 426 aa15.87■□□□□ 0.13
CHMP1A-205ENST00000548650 NMRK1Q9NWW6 199 aa15.87■□□□□ 0.13
CHMP1A-205ENST00000548650 DNAJB12Q9NXW2 375 aaKnown RBP15.87■□□□□ 0.13
CHMP1A-205ENST00000548650 CRIM1Q9NZV1 1036 aa15.87■□□□□ 0.13
CHMP1A-205ENST00000548650 VPS29Q9UBQ0 182 aa15.87■□□□□ 0.13
CHMP1A-205ENST00000548650 MCM8Q9UJA3 840 aa15.87■□□□□ 0.13
CHMP1A-205ENST00000548650 UTS2RQ9UKP6 389 aa15.87■□□□□ 0.13
CHMP1A-205ENST00000548650 CAMK2AQ9UQM7 478 aa15.87■□□□□ 0.13
CHMP1A-205ENST00000548650 MBD3L4A6NDZ8 208 aaPredicted RBP15.86■□□□□ 0.13
CHMP1A-205ENST00000548650 MBD3L3A6NE82 208 aaPredicted RBP15.86■□□□□ 0.13
CHMP1A-205ENST00000548650 FRG2CA6NGY1 282 aa15.86■□□□□ 0.13
CHMP1A-205ENST00000548650 MBD3L5A6NJ08 208 aaPredicted RBP15.86■□□□□ 0.13
CHMP1A-205ENST00000548650 CD8B2A6NJW9 211 aa15.86■□□□□ 0.13
CHMP1A-205ENST00000548650 SYT5O00445 386 aa15.86■□□□□ 0.13
CHMP1A-205ENST00000548650 TO15178 435 aa15.86■□□□□ 0.13
CHMP1A-205ENST00000548650 DLX3O60479 287 aa15.86■□□□□ 0.13
CHMP1A-205ENST00000548650 UGT2B11O75310 529 aa15.86■□□□□ 0.13
CHMP1A-205ENST00000548650 SUPT7LO94864 414 aa15.86■□□□□ 0.13
CHMP1A-205ENST00000548650 KRT6AP02538 564 aa15.86■□□□□ 0.13
CHMP1A-205ENST00000548650 KRT6BP04259 564 aa15.86■□□□□ 0.13
CHMP1A-205ENST00000548650 IL3P08700 152 aa15.86■□□□□ 0.13
CHMP1A-205ENST00000548650 TAC1P20366 129 aa15.86■□□□□ 0.13
CHMP1A-205ENST00000548650 UQCRC1P31930 480 aa15.86■□□□□ 0.13
CHMP1A-205ENST00000548650 KIR2DL3P43628 341 aa15.86■□□□□ 0.13
CHMP1A-205ENST00000548650 KRT6CP48668 564 aa15.86■□□□□ 0.13
CHMP1A-205ENST00000548650 ART1P52961 327 aa15.86■□□□□ 0.13
CHMP1A-205ENST00000548650 NAGLUP54802 743 aa15.86■□□□□ 0.13
CHMP1A-205ENST00000548650 RAE1P78406 368 aaKnown RBP15.86■□□□□ 0.13
CHMP1A-205ENST00000548650 SNTA1Q13424 505 aa15.86■□□□□ 0.13
CHMP1A-205ENST00000548650 TOMM20Q15388 145 aa15.86■□□□□ 0.13
CHMP1A-205ENST00000548650 TEX35Q5T0J7 233 aa15.86■□□□□ 0.13
CHMP1A-205ENST00000548650 SLC30A6Q6NXT4 461 aa15.86■□□□□ 0.13
CHMP1A-205ENST00000548650 GPRIN3Q6ZVF9 776 aa15.86■□□□□ 0.13
CHMP1A-205ENST00000548650 NUP54Q7Z3B4 507 aa15.86■□□□□ 0.13
CHMP1A-205ENST00000548650 OR1J4Q8NGS1 313 aa15.86■□□□□ 0.13
CHMP1A-205ENST00000548650 MBD3L2Q8NHZ7 208 aaPredicted RBP15.86■□□□□ 0.13
CHMP1A-205ENST00000548650 RNASE6Q93091 150 aaKnown RBP15.86■□□□□ 0.13
CHMP1A-205ENST00000548650 MTBPQ96DY7 904 aa15.86■□□□□ 0.13
CHMP1A-205ENST00000548650 WDYHV1Q96HA8 205 aa15.86■□□□□ 0.13
CHMP1A-205ENST00000548650 GPATCH1Q9BRR8 931 aaKnown RBP15.86■□□□□ 0.13
CHMP1A-205ENST00000548650 KLRF1Q9NZS2 232 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms