RNA–Protein interactions for RNA: ENST00000548259.1

VPS29-204, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-204ENST00000548259 GFRA1P56159 465 aa15.34■□□□□ 0.05
VPS29-204ENST00000548259 EEFSECP57772 596 aaKnown RBP15.34■□□□□ 0.05
VPS29-204ENST00000548259 LIPJQ5W064 366 aa15.34■□□□□ 0.05
VPS29-204ENST00000548259 MRM1Q6IN84 353 aaKnown RBP15.34■□□□□ 0.05
VPS29-204ENST00000548259 GBP7Q8N8V2 638 aaPredicted RBP15.34■□□□□ 0.05
VPS29-204ENST00000548259 FBXO36Q8NEA4 188 aa15.34■□□□□ 0.05
VPS29-204ENST00000548259 PPP1R14CQ8TAE6 165 aa15.34■□□□□ 0.05
VPS29-204ENST00000548259 TMEM158Q8WZ71 300 aa15.34■□□□□ 0.05
VPS29-204ENST00000548259 TMCO6Q96DC7 493 aa15.34■□□□□ 0.05
VPS29-204ENST00000548259 OMA1Q96E52 524 aa15.34■□□□□ 0.05
VPS29-204ENST00000548259 PGM2Q96G03 612 aa15.34■□□□□ 0.05
VPS29-204ENST00000548259 NXF5Q9H1B4 397 aaKnown RBP15.34■□□□□ 0.05
VPS29-204ENST00000548259 CAB39LQ9H9S4 337 aa15.34■□□□□ 0.05
VPS29-204ENST00000548259 DKKL1Q9UK85 242 aa15.34■□□□□ 0.05
VPS29-204ENST00000548259 NCKAP5O14513 1909 aa15.34■□□□□ 0.05
VPS29-204ENST00000548259 MXRA5Q9NR99 2828 aa15.34■□□□□ 0.05
VPS29-204ENST00000548259 UQCRHLA0A096LP55 91 aa15.33■□□□□ 0.04
VPS29-204ENST00000548259 SLC22A20A6NK97 555 aa15.33■□□□□ 0.04
VPS29-204ENST00000548259 WASHC1A8K0Z3 465 aa15.33■□□□□ 0.04
VPS29-204ENST00000548259 TMPRSS11DO60235 418 aa15.33■□□□□ 0.04
VPS29-204ENST00000548259 PAX1P15863 534 aa15.33■□□□□ 0.04
VPS29-204ENST00000548259 GPX3P22352 226 aa15.33■□□□□ 0.04
VPS29-204ENST00000548259 LHX2P50458 406 aa15.33■□□□□ 0.04
VPS29-204ENST00000548259 XKP51811 444 aa15.33■□□□□ 0.04
VPS29-204ENST00000548259 PDIA2Q13087 525 aaKnown RBP15.33■□□□□ 0.04
VPS29-204ENST00000548259 BCL2A1Q16548 175 aa15.33■□□□□ 0.04
VPS29-204ENST00000548259 HEPHL1Q6MZM0 1159 aa15.33■□□□□ 0.04
VPS29-204ENST00000548259 HMBOX1Q6NT76 420 aa15.33■□□□□ 0.04
VPS29-204ENST00000548259 PLCZ1Q86YW0 608 aa15.33■□□□□ 0.04
VPS29-204ENST00000548259 CTHRC1Q96CG8 243 aa15.33■□□□□ 0.04
VPS29-204ENST00000548259 STARD4Q96DR4 205 aa15.33■□□□□ 0.04
VPS29-204ENST00000548259 LCORQ96JN0 433 aaPredicted RBP15.33■□□□□ 0.04
VPS29-204ENST00000548259 ALG9Q9H6U8 611 aa15.33■□□□□ 0.04
VPS29-204ENST00000548259 GALNT9Q9HCQ5 603 aa15.33■□□□□ 0.04
VPS29-204ENST00000548259 PSD3Q9NYI0 1048 aa15.33■□□□□ 0.04
VPS29-204ENST00000548259 BCAP29Q9UHQ4 241 aa15.33■□□□□ 0.04
VPS29-204ENST00000548259 MTO1Q9Y2Z2 717 aaKnown RBP15.33■□□□□ 0.04
VPS29-204ENST00000548259 MRPS18CQ9Y3D5 142 aaKnown RBP15.33■□□□□ 0.04
VPS29-204ENST00000548259 DOCK7Q96N67 2140 aa15.32■□□□□ 0.04
VPS29-204ENST00000548259 GOLGA6L10A6NI86 522 aa15.32■□□□□ 0.04
VPS29-204ENST00000548259 SIAH2O43255 324 aa15.32■□□□□ 0.04
VPS29-204ENST00000548259 HCRTR2O43614 444 aa15.32■□□□□ 0.04
VPS29-204ENST00000548259 ABCB7O75027 752 aa15.32■□□□□ 0.04
VPS29-204ENST00000548259 GUCY1B2O75343 617 aa15.32■□□□□ 0.04
VPS29-204ENST00000548259 EEDO75530 441 aaKnown RBP15.32■□□□□ 0.04
VPS29-204ENST00000548259 WISP3O95389 354 aaPredicted RBP15.32■□□□□ 0.04
VPS29-204ENST00000548259 PORP16435 677 aaPredicted RBP15.32■□□□□ 0.04
VPS29-204ENST00000548259 ZNF708P17019 499 aa15.32■□□□□ 0.04
VPS29-204ENST00000548259 BSGP35613 385 aa15.32■□□□□ 0.04
VPS29-204ENST00000548259 DEKP35659 375 aaKnown RBP15.32■□□□□ 0.04
VPS29-204ENST00000548259 STARP49675 285 aa15.32■□□□□ 0.04
VPS29-204ENST00000548259 NR1H2P55055 460 aa15.32■□□□□ 0.04
VPS29-204ENST00000548259 ATP5J2P56134 94 aa15.32■□□□□ 0.04
VPS29-204ENST00000548259 NNATQ16517 81 aa15.32■□□□□ 0.04
VPS29-204ENST00000548259 BEX5Q5H9J7 111 aa15.32■□□□□ 0.04
VPS29-204ENST00000548259 RAPH1Q70E73 1250 aa15.32■□□□□ 0.04
VPS29-204ENST00000548259 MILR1Q7Z6M3 343 aa15.32■□□□□ 0.04
VPS29-204ENST00000548259 RNF175Q8N4F7 328 aa15.32■□□□□ 0.04
VPS29-204ENST00000548259 TEX9Q8N6V9 391 aa15.32■□□□□ 0.04
VPS29-204ENST00000548259 UBTD2Q8WUN7 234 aa15.32■□□□□ 0.04
VPS29-204ENST00000548259 HGDQ93099 445 aa15.32■□□□□ 0.04
VPS29-204ENST00000548259 ZC3HAV1LQ96H79 300 aaKnown RBP15.32■□□□□ 0.04
VPS29-204ENST00000548259 ZNF845Q96IR2 970 aaPredicted RBP15.32■□□□□ 0.04
VPS29-204ENST00000548259 OSBPL9Q96SU4 736 aa15.32■□□□□ 0.04
VPS29-204ENST00000548259 G6PC3Q9BUM1 346 aa15.32■□□□□ 0.04
VPS29-204ENST00000548259 DDX47Q9H0S4 455 aaKnown RBP15.32■□□□□ 0.04
VPS29-204ENST00000548259 NMRAL1Q9HBL8 299 aa15.32■□□□□ 0.04
VPS29-204ENST00000548259 FANCFQ9NPI8 374 aa15.32■□□□□ 0.04
VPS29-204ENST00000548259 PRODH2Q9UF12 536 aa15.32■□□□□ 0.04
VPS29-204ENST00000548259 KIAA1549Q9HCM3 1950 aa15.31■□□□□ 0.04
VPS29-204ENST00000548259 C2orf72A6NCS6 295 aa15.31■□□□□ 0.04
VPS29-204ENST00000548259 SYCE1LA8MT33 242 aa15.31■□□□□ 0.04
VPS29-204ENST00000548259 H0YIV9 168 aa15.31■□□□□ 0.04
VPS29-204ENST00000548259 PGRMC2O15173 223 aa15.31■□□□□ 0.04
VPS29-204ENST00000548259 UGDHO60701 494 aa15.31■□□□□ 0.04
VPS29-204ENST00000548259 TGM6O95932 706 aa15.31■□□□□ 0.04
VPS29-204ENST00000548259 CT62P0C5K7 136 aa15.31■□□□□ 0.04
VPS29-204ENST00000548259 PEPDP12955 493 aa15.31■□□□□ 0.04
VPS29-204ENST00000548259 CPMP14384 443 aa15.31■□□□□ 0.04
VPS29-204ENST00000548259 PPP3CBP16298 524 aa15.31■□□□□ 0.04
VPS29-204ENST00000548259 CNTFP26441 200 aa15.31■□□□□ 0.04
VPS29-204ENST00000548259 KRT20P35900 424 aa15.31■□□□□ 0.04
VPS29-204ENST00000548259 RAB10P61026 200 aa15.31■□□□□ 0.04
VPS29-204ENST00000548259 ETFDHQ16134 617 aa15.31■□□□□ 0.04
VPS29-204ENST00000548259 PLXDC2Q6UX71 529 aa15.31■□□□□ 0.04
VPS29-204ENST00000548259 PAGE2Q7Z2X7 111 aa15.31■□□□□ 0.04
VPS29-204ENST00000548259 BTLAQ7Z6A9 289 aa15.31■□□□□ 0.04
VPS29-204ENST00000548259 TBC1D1Q86TI0 1168 aaPredicted RBP15.31■□□□□ 0.04
VPS29-204ENST00000548259 WDSUB1Q8N9V3 476 aa15.31■□□□□ 0.04
VPS29-204ENST00000548259 ADCY4Q8NFM4 1077 aa15.31■□□□□ 0.04
VPS29-204ENST00000548259 UBXN10Q96LJ8 280 aa15.31■□□□□ 0.04
VPS29-204ENST00000548259 NODALQ96S42 347 aa15.31■□□□□ 0.04
VPS29-204ENST00000548259 SERPINI1Q99574 410 aa15.31■□□□□ 0.04
VPS29-204ENST00000548259 GPR22Q99680 433 aa15.31■□□□□ 0.04
VPS29-204ENST00000548259 CPNE1Q99829 537 aa15.31■□□□□ 0.04
VPS29-204ENST00000548259 MCMBPQ9BTE3 642 aa15.31■□□□□ 0.04
VPS29-204ENST00000548259 BRINP2Q9C0B6 783 aa15.31■□□□□ 0.04
VPS29-204ENST00000548259 ZNF701Q9NV72 531 aaPredicted RBP15.31■□□□□ 0.04
VPS29-204ENST00000548259 AHSPQ9NZD4 102 aa15.31■□□□□ 0.04
VPS29-204ENST00000548259 PSME2Q9UL46 239 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms