RNA–Protein interactions for RNA: ENST00000547614.5

CHMP1A-203, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-203ENST00000547614 C16orf78Q8WTQ4 265 aa17.1■□□□□ 0.33
CHMP1A-203ENST00000547614 RILPQ96NA2 401 aa17.1■□□□□ 0.33
CHMP1A-203ENST00000547614 KCNA7Q96RP8 456 aa17.1■□□□□ 0.33
CHMP1A-203ENST00000547614 TTYH2Q9BSA4 534 aa17.1■□□□□ 0.33
CHMP1A-203ENST00000547614 TRIM8Q9BZR9 551 aa17.1■□□□□ 0.33
CHMP1A-203ENST00000547614 OXSMQ9NWU1 459 aa17.1■□□□□ 0.33
CHMP1A-203ENST00000547614 ENO4A6NNW6 628 aa17.09■□□□□ 0.33
CHMP1A-203ENST00000547614 FOXO6A8MYZ6 492 aa17.09■□□□□ 0.33
CHMP1A-203ENST00000547614 COPEO14579 308 aa17.09■□□□□ 0.33
CHMP1A-203ENST00000547614 LRATO95237 230 aa17.09■□□□□ 0.33
CHMP1A-203ENST00000547614 ANXA4P09525 319 aaPredicted RBP17.09■□□□□ 0.33
CHMP1A-203ENST00000547614 CPA3P15088 417 aa17.09■□□□□ 0.33
CHMP1A-203ENST00000547614 EMDP50402 254 aa17.09■□□□□ 0.33
CHMP1A-203ENST00000547614 CEBPEQ15744 281 aa17.09■□□□□ 0.33
CHMP1A-203ENST00000547614 CFAP157Q5JU67 520 aa17.09■□□□□ 0.33
CHMP1A-203ENST00000547614 FAM180BQ6P0A1 224 aa17.09■□□□□ 0.33
CHMP1A-203ENST00000547614 TRIM46Q7Z4K8 759 aa17.09■□□□□ 0.33
CHMP1A-203ENST00000547614 CCDC116Q8IYX3 515 aa17.09■□□□□ 0.33
CHMP1A-203ENST00000547614 ZNF295-AS1Q8N0V1 137 aa17.09■□□□□ 0.33
CHMP1A-203ENST00000547614 OR52R1Q8NGF1 315 aa17.09■□□□□ 0.33
CHMP1A-203ENST00000547614 TREX2Q9BQ50 279 aaPredicted RBP17.09■□□□□ 0.33
CHMP1A-203ENST00000547614 ITPAQ9BY32 194 aa17.09■□□□□ 0.33
CHMP1A-203ENST00000547614 UBQLN3Q9H347 655 aa17.09■□□□□ 0.33
CHMP1A-203ENST00000547614 KCNJ16Q9NPI9 418 aa17.09■□□□□ 0.33
CHMP1A-203ENST00000547614 SLC35C2Q9NQQ7 365 aa17.09■□□□□ 0.33
CHMP1A-203ENST00000547614 GIMAP4Q9NUV9 329 aa17.09■□□□□ 0.33
CHMP1A-203ENST00000547614 SPRR3Q9UBC9 169 aa17.09■□□□□ 0.33
CHMP1A-203ENST00000547614 TNFRSF10DQ9UBN6 386 aa17.09■□□□□ 0.33
CHMP1A-203ENST00000547614 WBP11Q9Y2W2 641 aaKnown RBP17.09■□□□□ 0.33
CHMP1A-203ENST00000547614 PLLPQ9Y342 182 aa17.09■□□□□ 0.33
CHMP1A-203ENST00000547614 FAM215AQ9Y5M1 114 aa17.09■□□□□ 0.33
CHMP1A-203ENST00000547614 FAM47E-STBD1D6RA91 191 aa17.08■□□□□ 0.32
CHMP1A-203ENST00000547614 TO15178 435 aa17.08■□□□□ 0.32
CHMP1A-203ENST00000547614 GLI4P10075 376 aa17.08■□□□□ 0.32
CHMP1A-203ENST00000547614 PCSK2P16519 638 aa17.08■□□□□ 0.32
CHMP1A-203ENST00000547614 KRT4P19013 534 aa17.08■□□□□ 0.32
CHMP1A-203ENST00000547614 ELAVL4P26378 380 aaKnown RBP17.08■□□□□ 0.32
CHMP1A-203ENST00000547614 GDF1P27539 372 aa17.08■□□□□ 0.32
CHMP1A-203ENST00000547614 SSTR2P30874 369 aa17.08■□□□□ 0.32
CHMP1A-203ENST00000547614 MPIP34949 423 aa17.08■□□□□ 0.32
CHMP1A-203ENST00000547614 FOXA1P55317 472 aa17.08■□□□□ 0.32
CHMP1A-203ENST00000547614 MRPS35P82673 323 aaKnown RBP17.08■□□□□ 0.32
CHMP1A-203ENST00000547614 SLC18A2Q05940 514 aa17.08■□□□□ 0.32
CHMP1A-203ENST00000547614 BTKQ06187 659 aa17.08■□□□□ 0.32
CHMP1A-203ENST00000547614 SNTA1Q13424 505 aa17.08■□□□□ 0.32
CHMP1A-203ENST00000547614 LTB4RQ15722 352 aa17.08■□□□□ 0.32
CHMP1A-203ENST00000547614 ZNF628Q5EBL2 1059 aa17.08■□□□□ 0.32
CHMP1A-203ENST00000547614 SPDYAQ5MJ70 313 aa17.08■□□□□ 0.32
CHMP1A-203ENST00000547614 FNDC7Q5VTL7 733 aa17.08■□□□□ 0.32
CHMP1A-203ENST00000547614 BICRALQ6AI39 1079 aa17.08■□□□□ 0.32
CHMP1A-203ENST00000547614 RTL6Q6ICC9 239 aa17.08■□□□□ 0.32
CHMP1A-203ENST00000547614 SCIMPQ6UWF3 145 aa17.08■□□□□ 0.32
CHMP1A-203ENST00000547614 CCDC71Q8IV32 467 aaPredicted RBP17.08■□□□□ 0.32
CHMP1A-203ENST00000547614 PRR22Q8IZ63 422 aa17.08■□□□□ 0.32
CHMP1A-203ENST00000547614 LIX1Q8N485 282 aa17.08■□□□□ 0.32
CHMP1A-203ENST00000547614 SIMC1Q8NDZ2 872 aa17.08■□□□□ 0.32
CHMP1A-203ENST00000547614 FAM76AQ8TAV0 307 aa17.08■□□□□ 0.32
CHMP1A-203ENST00000547614 TMEM41AQ96HV5 264 aa17.08■□□□□ 0.32
CHMP1A-203ENST00000547614 METTL2AQ96IZ6 378 aaKnown RBP17.08■□□□□ 0.32
CHMP1A-203ENST00000547614 SLC6A15Q9H2J7 730 aa17.08■□□□□ 0.32
CHMP1A-203ENST00000547614 PFDN4Q9NQP4 134 aa17.08■□□□□ 0.32
CHMP1A-203ENST00000547614 GPR55Q9Y2T6 319 aaPredicted RBP17.08■□□□□ 0.32
CHMP1A-203ENST00000547614 NCKAP5O14513 1909 aa17.08■□□□□ 0.32
CHMP1A-203ENST00000547614 FRG2CA6NGY1 282 aa17.07■□□□□ 0.32
CHMP1A-203ENST00000547614 SMIM23A6NLE4 172 aa17.07■□□□□ 0.32
CHMP1A-203ENST00000547614 PLOD3O60568 738 aa17.07■□□□□ 0.32
CHMP1A-203ENST00000547614 TOXO94900 526 aa17.07■□□□□ 0.32
CHMP1A-203ENST00000547614 HPNP05981 417 aa17.07■□□□□ 0.32
CHMP1A-203ENST00000547614 DDCP20711 480 aa17.07■□□□□ 0.32
CHMP1A-203ENST00000547614 MASP1P48740 699 aa17.07■□□□□ 0.32
CHMP1A-203ENST00000547614 PSPHP78330 225 aa17.07■□□□□ 0.32
CHMP1A-203ENST00000547614 ZNF763Q0D2J5 394 aa17.07■□□□□ 0.32
CHMP1A-203ENST00000547614 IMPG1Q17R60 797 aa17.07■□□□□ 0.32
CHMP1A-203ENST00000547614 C1orf185Q5T7R7 199 aa17.07■□□□□ 0.32
CHMP1A-203ENST00000547614 TIGD3Q6B0B8 471 aa17.07■□□□□ 0.32
CHMP1A-203ENST00000547614 SLC30A6Q6NXT4 461 aa17.07■□□□□ 0.32
CHMP1A-203ENST00000547614 CCDC63Q8NA47 563 aa17.07■□□□□ 0.32
CHMP1A-203ENST00000547614 OR10Q1Q8NGQ4 319 aa17.07■□□□□ 0.32
CHMP1A-203ENST00000547614 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.07■□□□□ 0.32
CHMP1A-203ENST00000547614 EPS8L3Q8TE67 593 aaKnown RBP17.07■□□□□ 0.32
CHMP1A-203ENST00000547614 HGDQ93099 445 aa17.07■□□□□ 0.32
CHMP1A-203ENST00000547614 EXOSC8Q96B26 276 aaKnown RBP17.07■□□□□ 0.32
CHMP1A-203ENST00000547614 OMA1Q96E52 524 aa17.07■□□□□ 0.32
CHMP1A-203ENST00000547614 C14orf79Q96F83 325 aa17.07■□□□□ 0.32
CHMP1A-203ENST00000547614 GNRHR2Q96P88 292 aa17.07■□□□□ 0.32
CHMP1A-203ENST00000547614 RRAGDQ9NQL2 400 aaPredicted RBP17.07■□□□□ 0.32
CHMP1A-203ENST00000547614 TAS2R7Q9NYW3 318 aa17.07■□□□□ 0.32
CHMP1A-203ENST00000547614 MID2Q9UJV3 735 aa17.07■□□□□ 0.32
CHMP1A-203ENST00000547614 C15orf41Q9Y2V0 281 aa17.07■□□□□ 0.32
CHMP1A-203ENST00000547614 EXPH5Q8NEV8 1989 aa17.06■□□□□ 0.32
CHMP1A-203ENST00000547614 FBN2P35556 2912 aa17.06■□□□□ 0.32
CHMP1A-203ENST00000547614 CRCPO75575 148 aa17.06■□□□□ 0.32
CHMP1A-203ENST00000547614 UROSP10746 265 aa17.06■□□□□ 0.32
CHMP1A-203ENST00000547614 IGFBP2P18065 325 aa17.06■□□□□ 0.32
CHMP1A-203ENST00000547614 ZFP36L2P47974 494 aaKnown RBP17.06■□□□□ 0.32
CHMP1A-203ENST00000547614 TRPC1P48995 793 aa17.06■□□□□ 0.32
CHMP1A-203ENST00000547614 CDK9P50750 372 aaKnown RBP17.06■□□□□ 0.32
CHMP1A-203ENST00000547614 TFF3Q07654 80 aa17.06■□□□□ 0.32
CHMP1A-203ENST00000547614 PLCXD2Q0VAA5 305 aa17.06■□□□□ 0.32
CHMP1A-203ENST00000547614 NNATQ16517 81 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms