RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 ANXA8L1Q5VT79 327 aa15.53■□□□□ 0.08
CCDC38-203ENST00000546803 LYPD8Q6UX82 237 aa15.53■□□□□ 0.08
CCDC38-203ENST00000546803 IL20RBQ6UXL0 311 aa15.53■□□□□ 0.08
CCDC38-203ENST00000546803 RTL4Q6ZR62 310 aa15.53■□□□□ 0.08
CCDC38-203ENST00000546803 ZNF605Q86T29 641 aa15.53■□□□□ 0.08
CCDC38-203ENST00000546803 GOLM1Q8NBJ4 401 aa15.53■□□□□ 0.08
CCDC38-203ENST00000546803 GLB1L3Q8NCI6 653 aaPredicted RBP15.53■□□□□ 0.08
CCDC38-203ENST00000546803 VPS37AQ8NEZ2 397 aa15.53■□□□□ 0.08
CCDC38-203ENST00000546803 PSMA8Q8TAA3 256 aa15.53■□□□□ 0.08
CCDC38-203ENST00000546803 SPACA9Q96E40 222 aaPredicted RBP15.53■□□□□ 0.08
CCDC38-203ENST00000546803 VSTM2LQ96N03 204 aa15.53■□□□□ 0.08
CCDC38-203ENST00000546803 BTBD9Q96Q07 612 aa15.53■□□□□ 0.08
CCDC38-203ENST00000546803 ITPAQ9BY32 194 aa15.53■□□□□ 0.08
CCDC38-203ENST00000546803 NXF5Q9H1B4 397 aaKnown RBP15.53■□□□□ 0.08
CCDC38-203ENST00000546803 ANKRA2Q9H9E1 313 aa15.53■□□□□ 0.08
CCDC38-203ENST00000546803 NEUROD4Q9HD90 331 aa15.53■□□□□ 0.08
CCDC38-203ENST00000546803 DTX4Q9Y2E6 619 aa15.53■□□□□ 0.08
CCDC38-203ENST00000546803 GPR55Q9Y2T6 319 aaPredicted RBP15.53■□□□□ 0.08
CCDC38-203ENST00000546803 KLF13Q9Y2Y9 288 aaPredicted RBP15.53■□□□□ 0.08
CCDC38-203ENST00000546803 FRG2CA6NGY1 282 aa15.52■□□□□ 0.08
CCDC38-203ENST00000546803 TTC36A6NLP5 189 aa15.52■□□□□ 0.08
CCDC38-203ENST00000546803 RNASET2O00584 256 aaKnown RBP15.52■□□□□ 0.08
CCDC38-203ENST00000546803 TO15178 435 aa15.52■□□□□ 0.08
CCDC38-203ENST00000546803 ZNF354AO60765 605 aaPredicted RBP15.52■□□□□ 0.08
CCDC38-203ENST00000546803 PSMG1O95456 288 aa15.52■□□□□ 0.08
CCDC38-203ENST00000546803 NAGAP17050 411 aa15.52■□□□□ 0.08
CCDC38-203ENST00000546803 S100A3P33764 101 aa15.52■□□□□ 0.08
CCDC38-203ENST00000546803 TMED10P49755 219 aaKnown RBP15.52■□□□□ 0.08
CCDC38-203ENST00000546803 CDK9P50750 372 aaKnown RBP15.52■□□□□ 0.08
CCDC38-203ENST00000546803 UFM1P61960 85 aa15.52■□□□□ 0.08
CCDC38-203ENST00000546803 IRX1P78414 480 aaPredicted RBP15.52■□□□□ 0.08
CCDC38-203ENST00000546803 INPP5JQ15735 1006 aaPredicted RBP15.52■□□□□ 0.08
CCDC38-203ENST00000546803 MAPKAPK3Q16644 382 aa15.52■□□□□ 0.08
CCDC38-203ENST00000546803 TMEM198Q66K66 360 aa15.52■□□□□ 0.08
CCDC38-203ENST00000546803 CISD2Q8N5K1 135 aaKnown RBP15.52■□□□□ 0.08
CCDC38-203ENST00000546803 FAM98AQ8NCA5 519 aaKnown RBP15.52■□□□□ 0.08
CCDC38-203ENST00000546803 CPT1CQ8TCG5 803 aa15.52■□□□□ 0.08
CCDC38-203ENST00000546803 NUDT8Q8WV74 236 aa15.52■□□□□ 0.08
CCDC38-203ENST00000546803 MAGED4Q96JG8 741 aa15.52■□□□□ 0.08
CCDC38-203ENST00000546803 EBF4Q9BQW3 602 aa15.52■□□□□ 0.08
CCDC38-203ENST00000546803 FOLH1BQ9HBA9 442 aa15.52■□□□□ 0.08
CCDC38-203ENST00000546803 KLHL1Q9NR64 748 aa15.52■□□□□ 0.08
CCDC38-203ENST00000546803 SDR39U1Q9NRG7 319 aaPredicted RBP15.52■□□□□ 0.08
CCDC38-203ENST00000546803 ZIM2Q9NZV7 527 aa15.52■□□□□ 0.08
CCDC38-203ENST00000546803 NPFFR2Q9Y5X5 522 aa15.52■□□□□ 0.08
CCDC38-203ENST00000546803 COPG1Q9Y678 874 aaKnown RBP15.52■□□□□ 0.08
CCDC38-203ENST00000546803 IGSF10Q6WRI0 2623 aa15.52■□□□□ 0.07
CCDC38-203ENST00000546803 ATRXP46100 2492 aa15.51■□□□□ 0.07
CCDC38-203ENST00000546803 DOCK10Q96BY6 2186 aa15.51■□□□□ 0.07
CCDC38-203ENST00000546803 PRSS51A0A1B0GVH4 220 aa15.51■□□□□ 0.07
CCDC38-203ENST00000546803 EMC8O43402 210 aa15.51■□□□□ 0.07
CCDC38-203ENST00000546803 NME2P1O60361 137 aa15.51■□□□□ 0.07
CCDC38-203ENST00000546803 ERN1O75460 977 aaKnown RBP15.51■□□□□ 0.07
CCDC38-203ENST00000546803 RASAL1O95294 804 aa15.51■□□□□ 0.07
CCDC38-203ENST00000546803 VIMP08670 466 aaKnown RBP15.51■□□□□ 0.07
CCDC38-203ENST00000546803 CT45A8P0DMV1 189 aa15.51■□□□□ 0.07
CCDC38-203ENST00000546803 CT45A9P0DMV2 189 aa15.51■□□□□ 0.07
CCDC38-203ENST00000546803 TROVE2P10155 538 aaKnown RBP eCLIP15.51■□□□□ 0.07
CCDC38-203ENST00000546803 EFNA1P20827 205 aaPredicted RBP15.51■□□□□ 0.07
CCDC38-203ENST00000546803 NME2P22392 152 aa15.51■□□□□ 0.07
CCDC38-203ENST00000546803 MRPL19P49406 292 aaKnown RBP15.51■□□□□ 0.07
CCDC38-203ENST00000546803 MLLT10P55197 1068 aa15.51■□□□□ 0.07
CCDC38-203ENST00000546803 PRR5P85299 388 aa15.51■□□□□ 0.07
CCDC38-203ENST00000546803 TLE1Q04724 770 aa15.51■□□□□ 0.07
CCDC38-203ENST00000546803 ZNHIT3Q15649 155 aaPredicted RBP15.51■□□□□ 0.07
CCDC38-203ENST00000546803 NTRK2Q16620 822 aa15.51■□□□□ 0.07
CCDC38-203ENST00000546803 CT45A2Q5DJT8 189 aa15.51■□□□□ 0.07
CCDC38-203ENST00000546803 SPANXN4Q5MJ08 99 aa15.51■□□□□ 0.07
CCDC38-203ENST00000546803 OR4F3Q6IEY1 312 aa15.51■□□□□ 0.07
CCDC38-203ENST00000546803 TMEM64Q6YI46 380 aa15.51■□□□□ 0.07
CCDC38-203ENST00000546803 GALNTL5Q7Z4T8 443 aa15.51■□□□□ 0.07
CCDC38-203ENST00000546803 PSD4Q8NDX1 1056 aa15.51■□□□□ 0.07
CCDC38-203ENST00000546803 SNRNP40Q96DI7 357 aaKnown RBP15.51■□□□□ 0.07
CCDC38-203ENST00000546803 TEX37Q96LM6 180 aa15.51■□□□□ 0.07
CCDC38-203ENST00000546803 SIRT3Q9NTG7 399 aaPredicted RBP15.51■□□□□ 0.07
CCDC38-203ENST00000546803 FAM120CQ9NX05 1096 aaKnown RBP15.51■□□□□ 0.07
CCDC38-203ENST00000546803 PCDHGB4Q9UN71 923 aa15.51■□□□□ 0.07
CCDC38-203ENST00000546803 CHD6Q8TD26 2715 aa15.5■□□□□ 0.07
CCDC38-203ENST00000546803 KLRC4-KLRK1H3BQV0 150 aa15.5■□□□□ 0.07
CCDC38-203ENST00000546803 CFLARO15519 480 aa15.5■□□□□ 0.07
CCDC38-203ENST00000546803 SLC22A3O75751 556 aa15.5■□□□□ 0.07
CCDC38-203ENST00000546803 C6orf47O95873 294 aa15.5■□□□□ 0.07
CCDC38-203ENST00000546803 ABCD3P28288 659 aa15.5■□□□□ 0.07
CCDC38-203ENST00000546803 NME5P56597 212 aa15.5■□□□□ 0.07
CCDC38-203ENST00000546803 WNT3P56703 355 aa15.5■□□□□ 0.07
CCDC38-203ENST00000546803 STX1BP61266 288 aa15.5■□□□□ 0.07
CCDC38-203ENST00000546803 LRRC74AQ0VAA2 488 aa15.5■□□□□ 0.07
CCDC38-203ENST00000546803 ZNF155Q12901 538 aaPredicted RBP15.5■□□□□ 0.07
CCDC38-203ENST00000546803 FAM174BQ3ZCQ3 159 aa15.5■□□□□ 0.07
CCDC38-203ENST00000546803 SLC22A10Q63ZE4 541 aa15.5■□□□□ 0.07
CCDC38-203ENST00000546803 ZCCHC12Q6PEW1 402 aa15.5■□□□□ 0.07
CCDC38-203ENST00000546803 FAM180AQ6UWF9 173 aa15.5■□□□□ 0.07
CCDC38-203ENST00000546803 MDGA2Q7Z553 956 aa15.5■□□□□ 0.07
CCDC38-203ENST00000546803 MIER2Q8N344 545 aa15.5■□□□□ 0.07
CCDC38-203ENST00000546803 NUP43Q8NFH3 380 aa15.5■□□□□ 0.07
CCDC38-203ENST00000546803 DNAJB8Q8NHS0 232 aa15.5■□□□□ 0.07
CCDC38-203ENST00000546803 MOAP1Q96BY2 351 aa15.5■□□□□ 0.07
CCDC38-203ENST00000546803 MS4A4EQ96PG1 132 aa15.5■□□□□ 0.07
CCDC38-203ENST00000546803 SECISBP2Q96T21 854 aaKnown RBP15.5■□□□□ 0.07
CCDC38-203ENST00000546803 BARD1Q99728 777 aaKnown RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms