RNA–Protein interactions for RNA: ENST00000546735.5

TROAP-203, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 1,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-203ENST00000546735 C17orf47Q8NEP4 570 aa13.07□□□□□ -0.32
TROAP-203ENST00000546735 NTNG2Q96CW9 530 aa13.07□□□□□ -0.32
TROAP-203ENST00000546735 OMA1Q96E52 524 aa13.07□□□□□ -0.32
TROAP-203ENST00000546735 LCORQ96JN0 433 aaPredicted RBP13.07□□□□□ -0.32
TROAP-203ENST00000546735 ZNF681Q96N22 645 aa13.07□□□□□ -0.32
TROAP-203ENST00000546735 TMEM237Q96Q45 408 aa13.07□□□□□ -0.32
TROAP-203ENST00000546735 TRIB1Q96RU8 372 aa13.07□□□□□ -0.32
TROAP-203ENST00000546735 UGT2B28Q9BY64 529 aa13.07□□□□□ -0.32
TROAP-203ENST00000546735 PRDM14Q9GZV8 571 aa13.07□□□□□ -0.32
TROAP-203ENST00000546735 BRF2Q9HAW0 419 aa13.07□□□□□ -0.32
TROAP-203ENST00000546735 PFDN4Q9NQP4 134 aa13.07□□□□□ -0.32
TROAP-203ENST00000546735 VPS29Q9UBQ0 182 aa13.07□□□□□ -0.32
TROAP-203ENST00000546735 UTS2RQ9UKP6 389 aa13.07□□□□□ -0.32
TROAP-203ENST00000546735 NFU1Q9UMS0 254 aa13.07□□□□□ -0.32
TROAP-203ENST00000546735 MAPRE3Q9UPY8 281 aa13.07□□□□□ -0.32
TROAP-203ENST00000546735 ICOSLGO75144 302 aa13.06□□□□□ -0.32
TROAP-203ENST00000546735 UGT2B11O75310 529 aa13.06□□□□□ -0.32
TROAP-203ENST00000546735 IL3P08700 152 aa13.06□□□□□ -0.32
TROAP-203ENST00000546735 TAC1P20366 129 aa13.06□□□□□ -0.32
TROAP-203ENST00000546735 DNAJA1P31689 397 aaKnown RBP13.06□□□□□ -0.32
TROAP-203ENST00000546735 CEACAM8P31997 349 aaPredicted RBP13.06□□□□□ -0.32
TROAP-203ENST00000546735 ZNF136P52737 540 aa13.06□□□□□ -0.32
TROAP-203ENST00000546735 ART1P52961 327 aa13.06□□□□□ -0.32
TROAP-203ENST00000546735 NAGLUP54802 743 aa13.06□□□□□ -0.32
TROAP-203ENST00000546735 RAE1P78406 368 aaKnown RBP13.06□□□□□ -0.32
TROAP-203ENST00000546735 POMZP3Q6PJE2 187 aa13.06□□□□□ -0.32
TROAP-203ENST00000546735 SPNS3Q6ZMD2 512 aa13.06□□□□□ -0.32
TROAP-203ENST00000546735 NUP54Q7Z3B4 507 aa13.06□□□□□ -0.32
TROAP-203ENST00000546735 LACC1Q8IV20 430 aa13.06□□□□□ -0.32
TROAP-203ENST00000546735 CCDC116Q8IYX3 515 aa13.06□□□□□ -0.32
TROAP-203ENST00000546735 MNS1Q8NEH6 495 aa13.06□□□□□ -0.32
TROAP-203ENST00000546735 OR1J4Q8NGS1 313 aa13.06□□□□□ -0.32
TROAP-203ENST00000546735 RDH11Q8TC12 318 aa13.06□□□□□ -0.32
TROAP-203ENST00000546735 METTL6Q8TCB7 284 aa13.06□□□□□ -0.32
TROAP-203ENST00000546735 CTHRC1Q96CG8 243 aa13.06□□□□□ -0.32
TROAP-203ENST00000546735 WDYHV1Q96HA8 205 aa13.06□□□□□ -0.32
TROAP-203ENST00000546735 SH3GL2Q99962 352 aa13.06□□□□□ -0.32
TROAP-203ENST00000546735 GPATCH1Q9BRR8 931 aaKnown RBP13.06□□□□□ -0.32
TROAP-203ENST00000546735 FAIM2Q9BWQ8 316 aa13.06□□□□□ -0.32
TROAP-203ENST00000546735 EPB41L4BQ9H329 900 aa13.06□□□□□ -0.32
TROAP-203ENST00000546735 LIME1Q9H400 295 aa13.06□□□□□ -0.32
TROAP-203ENST00000546735 SERHLQ9NQF3 203 aa13.06□□□□□ -0.32
TROAP-203ENST00000546735 NMRK1Q9NWW6 199 aa13.06□□□□□ -0.32
TROAP-203ENST00000546735 DNAJB12Q9NXW2 375 aaKnown RBP13.06□□□□□ -0.32
TROAP-203ENST00000546735 KLRF1Q9NZS2 232 aa13.06□□□□□ -0.32
TROAP-203ENST00000546735 CRIM1Q9NZV1 1036 aa13.06□□□□□ -0.32
TROAP-203ENST00000546735 PSME2Q9UL46 239 aa13.06□□□□□ -0.32
TROAP-203ENST00000546735 CFL2Q9Y281 166 aa13.06□□□□□ -0.32
TROAP-203ENST00000546735 ZNF780BQ9Y6R6 833 aa13.06□□□□□ -0.32
TROAP-203ENST00000546735 TACC2O95359 2948 aa13.06□□□□□ -0.32
TROAP-203ENST00000546735 GOLGA8RI6L899 631 aa13.05□□□□□ -0.32
TROAP-203ENST00000546735 SYT5O00445 386 aa13.05□□□□□ -0.32
TROAP-203ENST00000546735 DVL2O14641 736 aa13.05□□□□□ -0.32
TROAP-203ENST00000546735 CTAG2O75638 210 aa13.05□□□□□ -0.32
TROAP-203ENST00000546735 KRT6AP02538 564 aa13.05□□□□□ -0.32
TROAP-203ENST00000546735 KRT6BP04259 564 aa13.05□□□□□ -0.32
TROAP-203ENST00000546735 NAGAP17050 411 aa13.05□□□□□ -0.32
TROAP-203ENST00000546735 HMOX2P30519 316 aa13.05□□□□□ -0.32
TROAP-203ENST00000546735 KIR2DL3P43628 341 aa13.05□□□□□ -0.32
TROAP-203ENST00000546735 KRT6CP48668 564 aa13.05□□□□□ -0.32
TROAP-203ENST00000546735 EMDP50402 254 aa13.05□□□□□ -0.32
TROAP-203ENST00000546735 TRA2BP62995 288 aaKnown RBP13.05□□□□□ -0.32
TROAP-203ENST00000546735 HMGCS1Q01581 520 aa13.05□□□□□ -0.32
TROAP-203ENST00000546735 BTKQ06187 659 aa13.05□□□□□ -0.32
TROAP-203ENST00000546735 RASA2Q15283 850 aa13.05□□□□□ -0.32
TROAP-203ENST00000546735 GLE1Q53GS7 698 aaKnown RBP13.05□□□□□ -0.32
TROAP-203ENST00000546735 ZNF628Q5EBL2 1059 aa13.05□□□□□ -0.32
TROAP-203ENST00000546735 SCIMPQ6UWF3 145 aa13.05□□□□□ -0.32
TROAP-203ENST00000546735 PLXDC2Q6UX71 529 aa13.05□□□□□ -0.32
TROAP-203ENST00000546735 TIFABQ6ZNK6 161 aa13.05□□□□□ -0.32
TROAP-203ENST00000546735 GPRIN3Q6ZVF9 776 aa13.05□□□□□ -0.32
TROAP-203ENST00000546735 PM20D2Q8IYS1 436 aa13.05□□□□□ -0.32
TROAP-203ENST00000546735 FAM83FQ8NEG4 500 aaPredicted RBP13.05□□□□□ -0.32
TROAP-203ENST00000546735 KAT2AQ92830 837 aa13.05□□□□□ -0.32
TROAP-203ENST00000546735 ABTB1Q969K4 478 aaPredicted RBP13.05□□□□□ -0.32
TROAP-203ENST00000546735 TMBIM1Q969X1 311 aa13.05□□□□□ -0.32
TROAP-203ENST00000546735 EXOSC8Q96B26 276 aaKnown RBP13.05□□□□□ -0.32
TROAP-203ENST00000546735 HSPBAP1Q96EW2 488 aa13.05□□□□□ -0.32
TROAP-203ENST00000546735 APIPQ96GX9 242 aa13.05□□□□□ -0.32
TROAP-203ENST00000546735 KCNA7Q96RP8 456 aa13.05□□□□□ -0.32
TROAP-203ENST00000546735 OSBPL11Q9BXB4 747 aa13.05□□□□□ -0.32
TROAP-203ENST00000546735 EBPLQ9BY08 206 aa13.05□□□□□ -0.32
TROAP-203ENST00000546735 ACPTQ9BZG2 426 aa13.05□□□□□ -0.32
TROAP-203ENST00000546735 SLC24A3Q9HC58 644 aa13.05□□□□□ -0.32
TROAP-203ENST00000546735 MCM8Q9UJA3 840 aa13.05□□□□□ -0.32
TROAP-203ENST00000546735 DLGAP4Q9Y2H0 992 aa13.05□□□□□ -0.32
TROAP-203ENST00000546735 TIMM22Q9Y584 194 aa13.05□□□□□ -0.32
TROAP-203ENST00000546735 PRAMEF25A6NGN4 478 aa13.04□□□□□ -0.32
TROAP-203ENST00000546735 SNPHO15079 494 aa13.04□□□□□ -0.32
TROAP-203ENST00000546735 PCDH7O60245 1069 aa13.04□□□□□ -0.32
TROAP-203ENST00000546735 IL2RAP01589 272 aa13.04□□□□□ -0.32
TROAP-203ENST00000546735 ABHD2P08910 425 aa13.04□□□□□ -0.32
TROAP-203ENST00000546735 TIMP3P35625 211 aa13.04□□□□□ -0.32
TROAP-203ENST00000546735 ASCL1P50553 236 aa13.04□□□□□ -0.32
TROAP-203ENST00000546735 IST1P53990 364 aa13.04□□□□□ -0.32
TROAP-203ENST00000546735 CSTF3Q12996 717 aaKnown RBP13.04□□□□□ -0.32
TROAP-203ENST00000546735 NHSL2Q5HYW2 709 aa13.04□□□□□ -0.32
TROAP-203ENST00000546735 LGSNQ5TDP6 509 aa13.04□□□□□ -0.32
TROAP-203ENST00000546735 NSUN5P2Q63ZY6 315 aa13.04□□□□□ -0.32
TROAP-203ENST00000546735 SLC30A6Q6NXT4 461 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms