RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 ZCCHC7Q8N3Z6 543 aaKnown RBP11.53□□□□□ -0.56
SCAF11-208ENST00000546534 CNEP1R1Q8N9A8 125 aa11.53□□□□□ -0.56
SCAF11-208ENST00000546534 HGDQ93099 445 aa11.53□□□□□ -0.56
SCAF11-208ENST00000546534 UBE2E3Q969T4 207 aa11.53□□□□□ -0.56
SCAF11-208ENST00000546534 ITPKCQ96DU7 683 aa11.53□□□□□ -0.56
SCAF11-208ENST00000546534 MS4A14Q96JA4 679 aa11.53□□□□□ -0.56
SCAF11-208ENST00000546534 OSBPL11Q9BXB4 747 aa11.53□□□□□ -0.56
SCAF11-208ENST00000546534 DERL2Q9GZP9 239 aa11.53□□□□□ -0.56
SCAF11-208ENST00000546534 NXF5Q9H1B4 397 aaKnown RBP11.53□□□□□ -0.56
SCAF11-208ENST00000546534 OR10A5Q9H207 317 aa11.53□□□□□ -0.56
SCAF11-208ENST00000546534 CXorf56Q9H5V9 222 aa11.53□□□□□ -0.56
SCAF11-208ENST00000546534 ACTR8Q9H981 624 aa11.53□□□□□ -0.56
SCAF11-208ENST00000546534 LZTFL1Q9NQ48 299 aa11.53□□□□□ -0.56
SCAF11-208ENST00000546534 TAS2R10Q9NYW0 307 aa11.53□□□□□ -0.56
SCAF11-208ENST00000546534 CD274Q9NZQ7 290 aa11.53□□□□□ -0.56
SCAF11-208ENST00000546534 HEY2Q9UBP5 337 aa11.53□□□□□ -0.56
SCAF11-208ENST00000546534 PTBP2Q9UKA9 531 aaKnown RBP11.53□□□□□ -0.56
SCAF11-208ENST00000546534 CHMP2BQ9UQN3 213 aa11.53□□□□□ -0.56
SCAF11-208ENST00000546534 DTX4Q9Y2E6 619 aa11.53□□□□□ -0.56
SCAF11-208ENST00000546534 DLGAP4Q9Y2H0 992 aa11.53□□□□□ -0.56
SCAF11-208ENST00000546534 ASB4Q9Y574 426 aa11.53□□□□□ -0.56
SCAF11-208ENST00000546534 USF3Q68DE3 2245 aa11.53□□□□□ -0.56
SCAF11-208ENST00000546534 MED12LQ86YW9 2145 aa11.53□□□□□ -0.56
SCAF11-208ENST00000546534 LRRC14BA6NHZ5 514 aa11.52□□□□□ -0.57
SCAF11-208ENST00000546534 TMPRSS11DO60235 418 aa11.52□□□□□ -0.57
SCAF11-208ENST00000546534 EEDO75530 441 aaKnown RBP11.52□□□□□ -0.57
SCAF11-208ENST00000546534 PPM1BO75688 479 aa11.52□□□□□ -0.57
SCAF11-208ENST00000546534 RHOXF2BP0C7M4 288 aa11.52□□□□□ -0.57
SCAF11-208ENST00000546534 NR2F6P10588 404 aa11.52□□□□□ -0.57
SCAF11-208ENST00000546534 ZNF708P17019 499 aa11.52□□□□□ -0.57
SCAF11-208ENST00000546534 NAGAP17050 411 aa11.52□□□□□ -0.57
SCAF11-208ENST00000546534 GPX3P22352 226 aa11.52□□□□□ -0.57
SCAF11-208ENST00000546534 SERPINB1P30740 379 aa11.52□□□□□ -0.57
SCAF11-208ENST00000546534 ELK3P41970 407 aa11.52□□□□□ -0.57
SCAF11-208ENST00000546534 KIR2DL2P43627 348 aaPredicted RBP11.52□□□□□ -0.57
SCAF11-208ENST00000546534 KCNJ5P48544 419 aa11.52□□□□□ -0.57
SCAF11-208ENST00000546534 DDX39BQ13838 428 aaKnown RBP11.52□□□□□ -0.57
SCAF11-208ENST00000546534 OR4D1Q15615 310 aa11.52□□□□□ -0.57
SCAF11-208ENST00000546534 NNATQ16517 81 aa11.52□□□□□ -0.57
SCAF11-208ENST00000546534 STEAP4Q687X5 459 aa11.52□□□□□ -0.57
SCAF11-208ENST00000546534 NUP54Q7Z3B4 507 aa11.52□□□□□ -0.57
SCAF11-208ENST00000546534 P4HA3Q7Z4N8 544 aa11.52□□□□□ -0.57
SCAF11-208ENST00000546534 IFNEQ86WN2 208 aa11.52□□□□□ -0.57
SCAF11-208ENST00000546534 GALNT12Q8IXK2 581 aa11.52□□□□□ -0.57
SCAF11-208ENST00000546534 WDSUB1Q8N9V3 476 aa11.52□□□□□ -0.57
SCAF11-208ENST00000546534 C17orf47Q8NEP4 570 aa11.52□□□□□ -0.57
SCAF11-208ENST00000546534 SLC39A3Q9BRY0 314 aa11.52□□□□□ -0.57
SCAF11-208ENST00000546534 POPDC3Q9HBV1 291 aa11.52□□□□□ -0.57
SCAF11-208ENST00000546534 YAE1D1Q9NRH1 226 aa11.52□□□□□ -0.57
SCAF11-208ENST00000546534 ELOVL5Q9NYP7 299 aa11.52□□□□□ -0.57
SCAF11-208ENST00000546534 RNF112Q9ULX5 631 aa11.52□□□□□ -0.57
SCAF11-208ENST00000546534 ROS1P08922 2347 aa11.52□□□□□ -0.57
SCAF11-208ENST00000546534 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.51□□□□□ -0.57
SCAF11-208ENST00000546534 DNALI1O14645 258 aaPredicted RBP11.51□□□□□ -0.57
SCAF11-208ENST00000546534 PGRMC2O15173 223 aa11.51□□□□□ -0.57
SCAF11-208ENST00000546534 PHF1O43189 567 aaPredicted RBP11.51□□□□□ -0.57
SCAF11-208ENST00000546534 KLF4O43474 513 aa11.51□□□□□ -0.57
SCAF11-208ENST00000546534 LILRA1O75019 489 aa11.51□□□□□ -0.57
SCAF11-208ENST00000546534 WISP3O95389 354 aaPredicted RBP11.51□□□□□ -0.57
SCAF11-208ENST00000546534 AIFM1O95831 613 aa11.51□□□□□ -0.57
SCAF11-208ENST00000546534 PLAUP00749 431 aa11.51□□□□□ -0.57
SCAF11-208ENST00000546534 CGAP01215 116 aa11.51□□□□□ -0.57
SCAF11-208ENST00000546534 TP53P04637 393 aaPredicted RBP11.51□□□□□ -0.57
SCAF11-208ENST00000546534 FAM58BPP0C7Q3 252 aa11.51□□□□□ -0.57
SCAF11-208ENST00000546534 CNTFP26441 200 aa11.51□□□□□ -0.57
SCAF11-208ENST00000546534 BSGP35613 385 aa11.51□□□□□ -0.57
SCAF11-208ENST00000546534 SIRPAP78324 504 aa11.51□□□□□ -0.57
SCAF11-208ENST00000546534 SNTA1Q13424 505 aa11.51□□□□□ -0.57
SCAF11-208ENST00000546534 VEZF1Q14119 521 aa11.51□□□□□ -0.57
SCAF11-208ENST00000546534 CLEC12BQ2HXU8 276 aa11.51□□□□□ -0.57
SCAF11-208ENST00000546534 OR2A2Q6IF42 318 aa11.51□□□□□ -0.57
SCAF11-208ENST00000546534 AAGABQ6PD74 315 aa11.51□□□□□ -0.57
SCAF11-208ENST00000546534 ZNF704Q6ZNC4 412 aaPredicted RBP11.51□□□□□ -0.57
SCAF11-208ENST00000546534 PDPRQ8NCN5 879 aa11.51□□□□□ -0.57
SCAF11-208ENST00000546534 HUS1BQ8NHY5 278 aa11.51□□□□□ -0.57
SCAF11-208ENST00000546534 SFXN2Q96NB2 322 aa11.51□□□□□ -0.57
SCAF11-208ENST00000546534 MTERF1Q99551 399 aaKnown RBP11.51□□□□□ -0.57
SCAF11-208ENST00000546534 CENPKQ9BS16 269 aa11.51□□□□□ -0.57
SCAF11-208ENST00000546534 ZNF717Q9BY31 904 aaPredicted RBP11.51□□□□□ -0.57
SCAF11-208ENST00000546534 REG4Q9BYZ8 158 aa11.51□□□□□ -0.57
SCAF11-208ENST00000546534 CD244Q9BZW8 370 aa11.51□□□□□ -0.57
SCAF11-208ENST00000546534 LYARQ9NX58 379 aaKnown RBP11.51□□□□□ -0.57
SCAF11-208ENST00000546534 KLRF1Q9NZS2 232 aa11.51□□□□□ -0.57
SCAF11-208ENST00000546534 ANK3Q12955 4377 aaKnown RBP11.51□□□□□ -0.57
SCAF11-208ENST00000546534 A0A0A6YYD5 115 aa11.5□□□□□ -0.57
SCAF11-208ENST00000546534 PRAMEF25A6NGN4 478 aa11.5□□□□□ -0.57
SCAF11-208ENST00000546534 SLC22A20A6NK97 555 aa11.5□□□□□ -0.57
SCAF11-208ENST00000546534 TLX2O43763 284 aaPredicted RBP11.5□□□□□ -0.57
SCAF11-208ENST00000546534 TMCC2O75069 709 aa11.5□□□□□ -0.57
SCAF11-208ENST00000546534 UGT2B11O75310 529 aa11.5□□□□□ -0.57
SCAF11-208ENST00000546534 THBDP07204 575 aa11.5□□□□□ -0.57
SCAF11-208ENST00000546534 CCDC166P0CW27 439 aa11.5□□□□□ -0.57
SCAF11-208ENST00000546534 EPB42P16452 691 aa11.5□□□□□ -0.57
SCAF11-208ENST00000546534 S1PR1P21453 382 aa11.5□□□□□ -0.57
SCAF11-208ENST00000546534 SRD5A2P31213 254 aa11.5□□□□□ -0.57
SCAF11-208ENST00000546534 GMPRP36959 345 aa11.5□□□□□ -0.57
SCAF11-208ENST00000546534 SMCPP49901 116 aaPredicted RBP11.5□□□□□ -0.57
SCAF11-208ENST00000546534 MGAT5Q09328 741 aa11.5□□□□□ -0.57
SCAF11-208ENST00000546534 OXLD1Q5BKU9 147 aa11.5□□□□□ -0.57
SCAF11-208ENST00000546534 BEX5Q5H9J7 111 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms