RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 ARSGQ96EG1 525 aa11.42□□□□□ -0.58
COPS7A-221ENST00000546229 ZNF681Q96N22 645 aa11.42□□□□□ -0.58
COPS7A-221ENST00000546229 FRG2BQ96QU4 278 aa11.42□□□□□ -0.58
COPS7A-221ENST00000546229 SERPINI1Q99574 410 aa11.42□□□□□ -0.58
COPS7A-221ENST00000546229 NTMT1Q9BV86 223 aa11.42□□□□□ -0.58
COPS7A-221ENST00000546229 ZDHHC18Q9NUE0 388 aa11.42□□□□□ -0.58
COPS7A-221ENST00000546229 GALNT8Q9NY28 637 aa11.42□□□□□ -0.58
COPS7A-221ENST00000546229 ZNF225Q9UK10 706 aa11.42□□□□□ -0.58
COPS7A-221ENST00000546229 PCDHA9Q9Y5H5 950 aa11.42□□□□□ -0.58
COPS7A-221ENST00000546229 A0A096LPK6 155 aa11.41□□□□□ -0.58
COPS7A-221ENST00000546229 CAPN14A8MX76 684 aa11.41□□□□□ -0.58
COPS7A-221ENST00000546229 EEF1E1-BLOC1S5C9J1V9 151 aa11.41□□□□□ -0.58
COPS7A-221ENST00000546229 TO15178 435 aa11.41□□□□□ -0.58
COPS7A-221ENST00000546229 EEF1E1O43324 174 aaKnown RBP11.41□□□□□ -0.58
COPS7A-221ENST00000546229 HCRTR2O43614 444 aa11.41□□□□□ -0.58
COPS7A-221ENST00000546229 ICOSLGO75144 302 aa11.41□□□□□ -0.58
COPS7A-221ENST00000546229 TRAPPC6AO75865 159 aa11.41□□□□□ -0.58
COPS7A-221ENST00000546229 CLDN9O95484 217 aa11.41□□□□□ -0.58
COPS7A-221ENST00000546229 ACTL6AO96019 429 aa11.41□□□□□ -0.58
COPS7A-221ENST00000546229 RPS17P08708 135 aaKnown RBP11.41□□□□□ -0.58
COPS7A-221ENST00000546229 SBK3P0C264 359 aa11.41□□□□□ -0.58
COPS7A-221ENST00000546229 TMIGD3P0DMS9 266 aaPredicted RBP11.41□□□□□ -0.58
COPS7A-221ENST00000546229 PIK3R1P27986 724 aa11.41□□□□□ -0.58
COPS7A-221ENST00000546229 PAFAH1B1P43034 410 aa11.41□□□□□ -0.58
COPS7A-221ENST00000546229 MASP1P48740 699 aa11.41□□□□□ -0.58
COPS7A-221ENST00000546229 EMDP50402 254 aa11.41□□□□□ -0.58
COPS7A-221ENST00000546229 LHX2P50458 406 aa11.41□□□□□ -0.58
COPS7A-221ENST00000546229 XKP51811 444 aa11.41□□□□□ -0.58
COPS7A-221ENST00000546229 GAS1P54826 345 aa11.41□□□□□ -0.58
COPS7A-221ENST00000546229 PLTPP55058 493 aa11.41□□□□□ -0.58
COPS7A-221ENST00000546229 CLDN18P56856 261 aa11.41□□□□□ -0.58
COPS7A-221ENST00000546229 DCAF7P61962 342 aa11.41□□□□□ -0.58
COPS7A-221ENST00000546229 PHEXP78562 749 aa11.41□□□□□ -0.58
COPS7A-221ENST00000546229 SNTA1Q13424 505 aa11.41□□□□□ -0.58
COPS7A-221ENST00000546229 EXOSC7Q15024 291 aaKnown RBP11.41□□□□□ -0.58
COPS7A-221ENST00000546229 LTB4RQ15722 352 aa11.41□□□□□ -0.58
COPS7A-221ENST00000546229 FAM83EQ2M2I3 478 aa11.41□□□□□ -0.58
COPS7A-221ENST00000546229 MROH9Q5TGP6 573 aa11.41□□□□□ -0.58
COPS7A-221ENST00000546229 RPS27LQ71UM5 84 aaKnown RBP11.41□□□□□ -0.58
COPS7A-221ENST00000546229 PACS2Q86VP3 889 aa11.41□□□□□ -0.58
COPS7A-221ENST00000546229 TMEM151AQ8N4L1 468 aa11.41□□□□□ -0.58
COPS7A-221ENST00000546229 PTGR2Q8N8N7 351 aaPredicted RBP11.41□□□□□ -0.58
COPS7A-221ENST00000546229 OR4K14Q8NGD5 310 aa11.41□□□□□ -0.58
COPS7A-221ENST00000546229 SMPDL3BQ92485 455 aa11.41□□□□□ -0.58
COPS7A-221ENST00000546229 OMA1Q96E52 524 aa11.41□□□□□ -0.58
COPS7A-221ENST00000546229 CNRIP1Q96F85 164 aaPredicted RBP11.41□□□□□ -0.58
COPS7A-221ENST00000546229 MARK4Q96L34 752 aa11.41□□□□□ -0.58
COPS7A-221ENST00000546229 SFXN3Q9BWM7 321 aa11.41□□□□□ -0.58
COPS7A-221ENST00000546229 OSBPL11Q9BXB4 747 aa11.41□□□□□ -0.58
COPS7A-221ENST00000546229 FUT8Q9BYC5 575 aa11.41□□□□□ -0.58
COPS7A-221ENST00000546229 NOL11Q9H8H0 719 aaKnown RBP11.41□□□□□ -0.58
COPS7A-221ENST00000546229 WDR41Q9HAD4 459 aa11.41□□□□□ -0.58
COPS7A-221ENST00000546229 SERHLQ9NQF3 203 aa11.41□□□□□ -0.58
COPS7A-221ENST00000546229 FARSBQ9NSD9 589 aaKnown RBP11.41□□□□□ -0.58
COPS7A-221ENST00000546229 PLLPQ9Y342 182 aa11.41□□□□□ -0.58
COPS7A-221ENST00000546229 TESMINQ9Y4I5 508 aa11.41□□□□□ -0.58
COPS7A-221ENST00000546229 CUBNO60494 3623 aa11.41□□□□□ -0.58
COPS7A-221ENST00000546229 C2orf72A6NCS6 295 aa11.4□□□□□ -0.58
COPS7A-221ENST00000546229 C17orf51A8MQB3 221 aa11.4□□□□□ -0.58
COPS7A-221ENST00000546229 STX16-NPEPL1H3BU86 382 aa11.4□□□□□ -0.58
COPS7A-221ENST00000546229 PPP6CO00743 305 aa11.4□□□□□ -0.58
COPS7A-221ENST00000546229 STX16O14662 325 aa11.4□□□□□ -0.58
COPS7A-221ENST00000546229 ACOX3O15254 700 aa11.4□□□□□ -0.58
COPS7A-221ENST00000546229 RCBTB2O95199 551 aa11.4□□□□□ -0.58
COPS7A-221ENST00000546229 KLK1P06870 262 aa11.4□□□□□ -0.58
COPS7A-221ENST00000546229 PORP16435 677 aaPredicted RBP11.4□□□□□ -0.58
COPS7A-221ENST00000546229 CNTFP26441 200 aa11.4□□□□□ -0.58
COPS7A-221ENST00000546229 LOXP28300 417 aaPredicted RBP11.4□□□□□ -0.58
COPS7A-221ENST00000546229 DGKQP52824 942 aa11.4□□□□□ -0.58
COPS7A-221ENST00000546229 NRG3P56975 720 aa11.4□□□□□ -0.58
COPS7A-221ENST00000546229 B3GALT5-AS1P59052 145 aa11.4□□□□□ -0.58
COPS7A-221ENST00000546229 ZNF628Q5EBL2 1059 aa11.4□□□□□ -0.58
COPS7A-221ENST00000546229 C10orf62Q5T681 223 aaPredicted RBP11.4□□□□□ -0.58
COPS7A-221ENST00000546229 SLC30A6Q6NXT4 461 aa11.4□□□□□ -0.58
COPS7A-221ENST00000546229 LETMD1Q6P1Q0 360 aa11.4□□□□□ -0.58
COPS7A-221ENST00000546229 NPSR1Q6W5P4 371 aa11.4□□□□□ -0.58
COPS7A-221ENST00000546229 BIVMQ86UB2 503 aa11.4□□□□□ -0.58
COPS7A-221ENST00000546229 KIF18BQ86Y91 864 aa11.4□□□□□ -0.58
COPS7A-221ENST00000546229 OR1J4Q8NGS1 313 aa11.4□□□□□ -0.58
COPS7A-221ENST00000546229 TRPC4APQ8TEL6 797 aa11.4□□□□□ -0.58
COPS7A-221ENST00000546229 TM4SF18Q96CE8 201 aa11.4□□□□□ -0.58
COPS7A-221ENST00000546229 ZFP3Q96NJ6 502 aa11.4□□□□□ -0.58
COPS7A-221ENST00000546229 DACH2Q96NX9 599 aa11.4□□□□□ -0.58
COPS7A-221ENST00000546229 BTBD9Q96Q07 612 aa11.4□□□□□ -0.58
COPS7A-221ENST00000546229 C1QTNF3Q9BXJ4 246 aa11.4□□□□□ -0.58
COPS7A-221ENST00000546229 EHD3Q9NZN3 535 aa11.4□□□□□ -0.58
COPS7A-221ENST00000546229 CPSF2Q9P2I0 782 aaKnown RBP11.4□□□□□ -0.58
COPS7A-221ENST00000546229 EXO1Q9UQ84 846 aaKnown RBP11.4□□□□□ -0.58
COPS7A-221ENST00000546229 ANGPTL3Q9Y5C1 460 aa11.4□□□□□ -0.58
COPS7A-221ENST00000546229 TNPO3Q9Y5L0 923 aaKnown RBP11.4□□□□□ -0.58
COPS7A-221ENST00000546229 FBN1P35555 2871 aaKnown RBP11.4□□□□□ -0.58
COPS7A-221ENST00000546229 JMJD1CQ15652 2540 aa11.4□□□□□ -0.59
COPS7A-221ENST00000546229 PRAMEF25A6NGN4 478 aa11.39□□□□□ -0.59
COPS7A-221ENST00000546229 FRG2CA6NGY1 282 aa11.39□□□□□ -0.59
COPS7A-221ENST00000546229 A8MXE2 369 aa11.39□□□□□ -0.59
COPS7A-221ENST00000546229 DEFB108AA8MXU0 73 aa11.39□□□□□ -0.59
COPS7A-221ENST00000546229 TSPAN2O60636 221 aa11.39□□□□□ -0.59
COPS7A-221ENST00000546229 CDH16O75309 829 aa11.39□□□□□ -0.59
COPS7A-221ENST00000546229 CT45A8P0DMV1 189 aa11.39□□□□□ -0.59
COPS7A-221ENST00000546229 CT45A9P0DMV2 189 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms