RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 OR9I1Q8NGQ6 314 aa18.93■□□□□ 0.62
HMGA2-211ENST00000545998 PNPLA2Q96AD5 504 aa18.93■□□□□ 0.62
HMGA2-211ENST00000545998 MAGED4Q96JG8 741 aa18.93■□□□□ 0.62
HMGA2-211ENST00000545998 VSTM2LQ96N03 204 aa18.93■□□□□ 0.62
HMGA2-211ENST00000545998 SIGLEC12Q96PQ1 595 aa18.93■□□□□ 0.62
HMGA2-211ENST00000545998 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.93■□□□□ 0.62
HMGA2-211ENST00000545998 COPG1Q9Y678 874 aaKnown RBP18.93■□□□□ 0.62
HMGA2-211ENST00000545998 EXPH5Q8NEV8 1989 aa18.93■□□□□ 0.62
HMGA2-211ENST00000545998 PRSS51A0A1B0GVH4 220 aa18.93■□□□□ 0.62
HMGA2-211ENST00000545998 NEURL1O76050 574 aa18.93■□□□□ 0.62
HMGA2-211ENST00000545998 OR6B1O95007 311 aa18.93■□□□□ 0.62
HMGA2-211ENST00000545998 PGRP06401 933 aa18.93■□□□□ 0.62
HMGA2-211ENST00000545998 CASRP41180 1078 aa18.93■□□□□ 0.62
HMGA2-211ENST00000545998 SOX3P41225 446 aa18.93■□□□□ 0.62
HMGA2-211ENST00000545998 CYB561P49447 251 aa18.93■□□□□ 0.62
HMGA2-211ENST00000545998 ATP4BP51164 291 aa18.93■□□□□ 0.62
HMGA2-211ENST00000545998 NR0B1P51843 470 aaKnown RBP18.93■□□□□ 0.62
HMGA2-211ENST00000545998 DGKQP52824 942 aa18.93■□□□□ 0.62
HMGA2-211ENST00000545998 STX1BP61266 288 aa18.93■□□□□ 0.62
HMGA2-211ENST00000545998 HBA1P69905 142 aa18.93■□□□□ 0.62
HMGA2-211ENST00000545998 IRX1P78414 480 aaPredicted RBP18.93■□□□□ 0.62
HMGA2-211ENST00000545998 OC90Q02509 493 aaPredicted RBP18.93■□□□□ 0.62
HMGA2-211ENST00000545998 TLR1Q15399 786 aa18.93■□□□□ 0.62
HMGA2-211ENST00000545998 OR1C1Q15619 314 aa18.93■□□□□ 0.62
HMGA2-211ENST00000545998 PLEKHN1Q494U1 663 aaPredicted RBP18.93■□□□□ 0.62
HMGA2-211ENST00000545998 ANXA8L1Q5VT79 327 aa18.93■□□□□ 0.62
HMGA2-211ENST00000545998 ZNF227Q86WZ6 799 aa18.93■□□□□ 0.62
HMGA2-211ENST00000545998 CLECL1Q8IZS7 167 aa18.93■□□□□ 0.62
HMGA2-211ENST00000545998 MDS2Q8NDY4 140 aa18.93■□□□□ 0.62
HMGA2-211ENST00000545998 SLC22A8Q8TCC7 542 aa18.93■□□□□ 0.62
HMGA2-211ENST00000545998 ASB15Q8WXK1 588 aa18.93■□□□□ 0.62
HMGA2-211ENST00000545998 TRIM4Q9C037 500 aa18.93■□□□□ 0.62
HMGA2-211ENST00000545998 NXF5Q9H1B4 397 aaKnown RBP18.93■□□□□ 0.62
HMGA2-211ENST00000545998 CXorf36Q9H7Y0 433 aa18.93■□□□□ 0.62
HMGA2-211ENST00000545998 FOLH1BQ9HBA9 442 aa18.93■□□□□ 0.62
HMGA2-211ENST00000545998 NEUROD4Q9HD90 331 aa18.93■□□□□ 0.62
HMGA2-211ENST00000545998 RYDENQ9NUL5 291 aaKnown RBP18.93■□□□□ 0.62
HMGA2-211ENST00000545998 FAM120CQ9NX05 1096 aaKnown RBP18.93■□□□□ 0.62
HMGA2-211ENST00000545998 LRFN1Q9P244 771 aa18.93■□□□□ 0.62
HMGA2-211ENST00000545998 KLHL14Q9P2G3 628 aa18.93■□□□□ 0.62
HMGA2-211ENST00000545998 ERVK-11Q9UQG0 969 aa18.93■□□□□ 0.62
HMGA2-211ENST00000545998 GPR55Q9Y2T6 319 aaPredicted RBP18.93■□□□□ 0.62
HMGA2-211ENST00000545998 C1QL1O75973 258 aa18.92■□□□□ 0.62
HMGA2-211ENST00000545998 LSP1P33241 339 aa18.92■□□□□ 0.62
HMGA2-211ENST00000545998 ARFIP2P53365 341 aa18.92■□□□□ 0.62
HMGA2-211ENST00000545998 DCAF7P61962 342 aa18.92■□□□□ 0.62
HMGA2-211ENST00000545998 SF3A3Q12874 501 aaKnown RBP eCLIP18.92■□□□□ 0.62
HMGA2-211ENST00000545998 ZNF169Q14929 603 aaPredicted RBP18.92■□□□□ 0.62
HMGA2-211ENST00000545998 SPINK14Q6IE38 97 aa18.92■□□□□ 0.62
HMGA2-211ENST00000545998 LYPD8Q6UX82 237 aa18.92■□□□□ 0.62
HMGA2-211ENST00000545998 Q8NA96 180 aa18.92■□□□□ 0.62
HMGA2-211ENST00000545998 VPS37AQ8NEZ2 397 aa18.92■□□□□ 0.62
HMGA2-211ENST00000545998 NUP43Q8NFH3 380 aa18.92■□□□□ 0.62
HMGA2-211ENST00000545998 FAM120BQ96EK7 910 aaKnown RBP18.92■□□□□ 0.62
HMGA2-211ENST00000545998 LCORQ96JN0 433 aaPredicted RBP18.92■□□□□ 0.62
HMGA2-211ENST00000545998 BTBD9Q96Q07 612 aa18.92■□□□□ 0.62
HMGA2-211ENST00000545998 ZNF385DQ9H6B1 395 aa18.92■□□□□ 0.62
HMGA2-211ENST00000545998 C3orf14Q9HBI5 128 aa18.92■□□□□ 0.62
HMGA2-211ENST00000545998 TRIM33Q9UPN9 1127 aa18.92■□□□□ 0.62
HMGA2-211ENST00000545998 EML6Q6ZMW3 1958 aa18.91■□□□□ 0.62
HMGA2-211ENST00000545998 TRAV17A0A0B4J275 112 aa18.91■□□□□ 0.62
HMGA2-211ENST00000545998 EMC8O43402 210 aa18.91■□□□□ 0.62
HMGA2-211ENST00000545998 IL6P05231 212 aa18.91■□□□□ 0.62
HMGA2-211ENST00000545998 DRD5P21918 477 aa18.91■□□□□ 0.62
HMGA2-211ENST00000545998 PPICP45877 212 aa18.91■□□□□ 0.62
HMGA2-211ENST00000545998 POLR2JP52435 117 aaKnown RBP18.91■□□□□ 0.62
HMGA2-211ENST00000545998 SEC24CP53992 1094 aa18.91■□□□□ 0.62
HMGA2-211ENST00000545998 COLEC12Q5KU26 742 aa18.91■□□□□ 0.62
HMGA2-211ENST00000545998 METTL21CQ5VZV1 264 aa18.91■□□□□ 0.62
HMGA2-211ENST00000545998 OPN5Q6U736 354 aa18.91■□□□□ 0.62
HMGA2-211ENST00000545998 TMEM64Q6YI46 380 aa18.91■□□□□ 0.62
HMGA2-211ENST00000545998 ANKRD46Q86W74 232 aa18.91■□□□□ 0.62
HMGA2-211ENST00000545998 GPALPP1Q8IXQ4 340 aa18.91■□□□□ 0.62
HMGA2-211ENST00000545998 TAGAPQ8N103 731 aa18.91■□□□□ 0.62
HMGA2-211ENST00000545998 ZNF843Q8N446 348 aa18.91■□□□□ 0.62
HMGA2-211ENST00000545998 HORMAD2Q8N7B1 307 aa18.91■□□□□ 0.62
HMGA2-211ENST00000545998 ANAPC2Q9UJX6 822 aa18.91■□□□□ 0.62
HMGA2-211ENST00000545998 SNX8Q9Y5X2 465 aa18.91■□□□□ 0.62
HMGA2-211ENST00000545998 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.9■□□□□ 0.62
HMGA2-211ENST00000545998 FAM234BA2RU67 622 aa18.9■□□□□ 0.62
HMGA2-211ENST00000545998 FRG2CA6NGY1 282 aa18.9■□□□□ 0.62
HMGA2-211ENST00000545998 A8MVJ9 347 aa18.9■□□□□ 0.62
HMGA2-211ENST00000545998 ACOX3O15254 700 aa18.9■□□□□ 0.62
HMGA2-211ENST00000545998 CFLARO15519 480 aa18.9■□□□□ 0.62
HMGA2-211ENST00000545998 ERN1O75460 977 aaKnown RBP18.9■□□□□ 0.62
HMGA2-211ENST00000545998 ABCB1P08183 1280 aaPredicted RBP18.9■□□□□ 0.62
HMGA2-211ENST00000545998 CT45A8P0DMV1 189 aa18.9■□□□□ 0.62
HMGA2-211ENST00000545998 CT45A9P0DMV2 189 aa18.9■□□□□ 0.62
HMGA2-211ENST00000545998 NCF2P19878 526 aaPredicted RBP18.9■□□□□ 0.62
HMGA2-211ENST00000545998 ZNF155Q12901 538 aaPredicted RBP18.9■□□□□ 0.62
HMGA2-211ENST00000545998 SQLEQ14534 574 aa18.9■□□□□ 0.62
HMGA2-211ENST00000545998 NNATQ16517 81 aa18.9■□□□□ 0.62
HMGA2-211ENST00000545998 CT45A2Q5DJT8 189 aa18.9■□□□□ 0.62
HMGA2-211ENST00000545998 IL20RBQ6UXL0 311 aa18.9■□□□□ 0.62
HMGA2-211ENST00000545998 CYP4Z2PQ8N1L4 340 aa18.9■□□□□ 0.62
HMGA2-211ENST00000545998 GIMAP5Q96F15 307 aa18.9■□□□□ 0.62
HMGA2-211ENST00000545998 CCDC115Q96NT0 180 aa18.9■□□□□ 0.62
HMGA2-211ENST00000545998 MS4A4EQ96PG1 132 aa18.9■□□□□ 0.62
HMGA2-211ENST00000545998 OR52E6Q96RD3 313 aa18.9■□□□□ 0.62
HMGA2-211ENST00000545998 HPF1Q9NWY4 346 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms