RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 SLC9A3R1O14745 358 aaPredicted RBP14.39□□□□□ -0.11
CNN3-207ENST00000545882 HOXC11O43248 304 aaPredicted RBP14.39□□□□□ -0.11
CNN3-207ENST00000545882 NTN1O95631 604 aa14.39□□□□□ -0.11
CNN3-207ENST00000545882 ACP2P11117 423 aa14.39□□□□□ -0.11
CNN3-207ENST00000545882 TPBGQ13641 420 aa14.39□□□□□ -0.11
CNN3-207ENST00000545882 SNAPC1Q16533 368 aa14.39□□□□□ -0.11
CNN3-207ENST00000545882 GAB4Q2WGN9 574 aa14.39□□□□□ -0.11
CNN3-207ENST00000545882 FNDC3BQ53EP0 1204 aaKnown RBP14.39□□□□□ -0.11
CNN3-207ENST00000545882 KLHL22Q53GT1 634 aa14.39□□□□□ -0.11
CNN3-207ENST00000545882 NDUFAF5Q5TEU4 345 aa14.39□□□□□ -0.11
CNN3-207ENST00000545882 ZNF485Q8NCK3 441 aa14.39□□□□□ -0.11
CNN3-207ENST00000545882 BBS10Q8TAM1 723 aa14.39□□□□□ -0.11
CNN3-207ENST00000545882 TMEM163Q8TC26 289 aa14.39□□□□□ -0.11
CNN3-207ENST00000545882 GATAD2BQ8WXI9 593 aa14.39□□□□□ -0.11
CNN3-207ENST00000545882 RNFT2Q96EX2 444 aa14.39□□□□□ -0.11
CNN3-207ENST00000545882 PHOX2BQ99453 314 aa14.39□□□□□ -0.11
CNN3-207ENST00000545882 MED18Q9BUE0 208 aa14.39□□□□□ -0.11
CNN3-207ENST00000545882 KATNB1Q9BVA0 655 aa14.39□□□□□ -0.11
CNN3-207ENST00000545882 C11orf54Q9H0W9 315 aaPredicted RBP14.39□□□□□ -0.11
CNN3-207ENST00000545882 KLHL31Q9H511 634 aa14.39□□□□□ -0.11
CNN3-207ENST00000545882 SLC35C2Q9NQQ7 365 aa14.39□□□□□ -0.11
CNN3-207ENST00000545882 A0A087WUU8 490 aa14.38□□□□□ -0.11
CNN3-207ENST00000545882 EDDM13A0A1B0GTR0 161 aa14.38□□□□□ -0.11
CNN3-207ENST00000545882 TMEM129A0AVI4 362 aa14.38□□□□□ -0.11
CNN3-207ENST00000545882 RFXAPO00287 272 aa14.38□□□□□ -0.11
CNN3-207ENST00000545882 STATHP02808 62 aa14.38□□□□□ -0.11
CNN3-207ENST00000545882 EPCAMP16422 314 aa14.38□□□□□ -0.11
CNN3-207ENST00000545882 GPC1P35052 558 aa14.38□□□□□ -0.11
CNN3-207ENST00000545882 SLC9A3P48764 834 aa14.38□□□□□ -0.11
CNN3-207ENST00000545882 TRA2BP62995 288 aaKnown RBP14.38□□□□□ -0.11
CNN3-207ENST00000545882 SCN1BQ07699 218 aa14.38□□□□□ -0.11
CNN3-207ENST00000545882 ZNF750Q32MQ0 723 aa14.38□□□□□ -0.11
CNN3-207ENST00000545882 ZNF697Q5TEC3 545 aa14.38□□□□□ -0.11
CNN3-207ENST00000545882 ADAMTSL4Q6UY14 1074 aa14.38□□□□□ -0.11
CNN3-207ENST00000545882 HSDL2Q6YN16 418 aa14.38□□□□□ -0.11
CNN3-207ENST00000545882 QSOX2Q6ZRP7 698 aa14.38□□□□□ -0.11
CNN3-207ENST00000545882 PRICKLE2Q7Z3G6 844 aa14.38□□□□□ -0.11
CNN3-207ENST00000545882 LAPTM4BQ86VI4 370 aa14.38□□□□□ -0.11
CNN3-207ENST00000545882 RDH10Q8IZV5 341 aa14.38□□□□□ -0.11
CNN3-207ENST00000545882 LINC00471Q8N535 108 aa14.38□□□□□ -0.11
CNN3-207ENST00000545882 POF1BQ8WVV4 589 aa14.38□□□□□ -0.11
CNN3-207ENST00000545882 DMRTB1Q96MA1 342 aa14.38□□□□□ -0.11
CNN3-207ENST00000545882 C17orf62Q9BQA9 187 aa14.38□□□□□ -0.11
CNN3-207ENST00000545882 SAP130Q9H0E3 1048 aa14.38□□□□□ -0.11
CNN3-207ENST00000545882 QRSL1Q9H0R6 528 aaKnown RBP14.38□□□□□ -0.11
CNN3-207ENST00000545882 RERGLQ9H628 205 aa14.38□□□□□ -0.11
CNN3-207ENST00000545882 CXXC1Q9P0U4 656 aaPredicted RBP14.38□□□□□ -0.11
CNN3-207ENST00000545882 SLC9A8Q9Y2E8 581 aa14.38□□□□□ -0.11
CNN3-207ENST00000545882 GPR52Q9Y2T5 361 aa14.38□□□□□ -0.11
CNN3-207ENST00000545882 NOX1Q9Y5S8 564 aa14.38□□□□□ -0.11
CNN3-207ENST00000545882 GOLGA4Q13439 2230 aaKnown RBP14.37□□□□□ -0.11
CNN3-207ENST00000545882 A0A0B4J293 547 aa14.37□□□□□ -0.11
CNN3-207ENST00000545882 FAM172BPA6NC97 362 aa14.37□□□□□ -0.11
CNN3-207ENST00000545882 FABP12A6NFH5 140 aa14.37□□□□□ -0.11
CNN3-207ENST00000545882 OTOL1A6NHN0 477 aaPredicted RBP14.37□□□□□ -0.11
CNN3-207ENST00000545882 GLOD5A6NK44 160 aa14.37□□□□□ -0.11
CNN3-207ENST00000545882 MAN2B1O00754 1011 aa14.37□□□□□ -0.11
CNN3-207ENST00000545882 TFECO14948 347 aaPredicted RBP14.37□□□□□ -0.11
CNN3-207ENST00000545882 POLR1CO15160 346 aaPredicted RBP14.37□□□□□ -0.11
CNN3-207ENST00000545882 PLA2G10O15496 165 aa14.37□□□□□ -0.11
CNN3-207ENST00000545882 PRODHO43272 600 aa14.37□□□□□ -0.11
CNN3-207ENST00000545882 TSPAN19P0C672 248 aa14.37□□□□□ -0.11
CNN3-207ENST00000545882 LIMS3P0CW19 117 aa14.37□□□□□ -0.11
CNN3-207ENST00000545882 LIMS4P0CW20 117 aa14.37□□□□□ -0.11
CNN3-207ENST00000545882 ALPPL2P10696 532 aa14.37□□□□□ -0.11
CNN3-207ENST00000545882 DRD2P14416 443 aa14.37□□□□□ -0.11
CNN3-207ENST00000545882 HSD17B2P37059 387 aa14.37□□□□□ -0.11
CNN3-207ENST00000545882 RPS5P46782 204 aaKnown RBP14.37□□□□□ -0.11
CNN3-207ENST00000545882 KHKP50053 298 aa14.37□□□□□ -0.11
CNN3-207ENST00000545882 NCBP2P52298 156 aaKnown RBP eCLIP14.37□□□□□ -0.11
CNN3-207ENST00000545882 SMSP52788 366 aa14.37□□□□□ -0.11
CNN3-207ENST00000545882 FABP5Q01469 135 aa14.37□□□□□ -0.11
CNN3-207ENST00000545882 RAB40BQ12829 278 aa14.37□□□□□ -0.11
CNN3-207ENST00000545882 MAP4K2Q12851 820 aa14.37□□□□□ -0.11
CNN3-207ENST00000545882 TBRG1Q3YBR2 411 aa14.37□□□□□ -0.11
CNN3-207ENST00000545882 ZNF628Q5EBL2 1059 aa14.37□□□□□ -0.11
CNN3-207ENST00000545882 C6orf183Q5T699 404 aa14.37□□□□□ -0.11
CNN3-207ENST00000545882 FAM46CQ5VWP2 391 aa14.37□□□□□ -0.11
CNN3-207ENST00000545882 LRRTM4Q86VH4 590 aa14.37□□□□□ -0.11
CNN3-207ENST00000545882 SUN3Q8TAQ9 357 aa14.37□□□□□ -0.11
CNN3-207ENST00000545882 SPPL3Q8TCT6 385 aa14.37□□□□□ -0.11
CNN3-207ENST00000545882 RNF31Q96EP0 1072 aa14.37□□□□□ -0.11
CNN3-207ENST00000545882 C16orf58Q96GQ5 468 aa14.37□□□□□ -0.11
CNN3-207ENST00000545882 DIRAS2Q96HU8 199 aa14.37□□□□□ -0.11
CNN3-207ENST00000545882 RNF170Q96K19 258 aa14.37□□□□□ -0.11
CNN3-207ENST00000545882 KCTD7Q96MP8 289 aa14.37□□□□□ -0.11
CNN3-207ENST00000545882 TM9SF2Q99805 663 aa14.37□□□□□ -0.11
CNN3-207ENST00000545882 PITHD1Q9GZP4 211 aaPredicted RBP14.37□□□□□ -0.11
CNN3-207ENST00000545882 PCBD2Q9H0N5 130 aa14.37□□□□□ -0.11
CNN3-207ENST00000545882 POLMQ9NP87 494 aaPredicted RBP14.37□□□□□ -0.11
CNN3-207ENST00000545882 ISYNA1Q9NPH2 558 aa14.37□□□□□ -0.11
CNN3-207ENST00000545882 A0A1W2PS29 197 aa14.37□□□□□ -0.11
CNN3-207ENST00000545882 LRIT2A6NDA9 550 aa14.37□□□□□ -0.11
CNN3-207ENST00000545882 TTC36A6NLP5 189 aa14.37□□□□□ -0.11
CNN3-207ENST00000545882 PGRMC2O15173 223 aa14.37□□□□□ -0.11
CNN3-207ENST00000545882 CLEC3AO75596 197 aa14.37□□□□□ -0.11
CNN3-207ENST00000545882 LALBAP00709 142 aa14.37□□□□□ -0.11
CNN3-207ENST00000545882 SERPIND1P05546 499 aa14.37□□□□□ -0.11
CNN3-207ENST00000545882 PPP2R1BP30154 601 aa14.37□□□□□ -0.11
CNN3-207ENST00000545882 BUD31P41223 144 aaPredicted RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms