RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 INSL4Q14641 139 aa14.88□□□□□ -0.03
LDLR-204ENST00000545707 FAM46CQ5VWP2 391 aa14.88□□□□□ -0.03
LDLR-204ENST00000545707 TYW3Q6IPR3 259 aaKnown RBP14.88□□□□□ -0.03
LDLR-204ENST00000545707 OR8K5Q8NH50 307 aa14.88□□□□□ -0.03
LDLR-204ENST00000545707 CXorf40AQ8TE69 158 aa14.88□□□□□ -0.03
LDLR-204ENST00000545707 BBS4Q96RK4 519 aa14.88□□□□□ -0.03
LDLR-204ENST00000545707 CFHR5Q9BXR6 569 aa14.88□□□□□ -0.03
LDLR-204ENST00000545707 SAP130Q9H0E3 1048 aa14.88□□□□□ -0.03
LDLR-204ENST00000545707 SLC35C2Q9NQQ7 365 aa14.88□□□□□ -0.03
LDLR-204ENST00000545707 PLSCR3Q9NRY6 295 aa14.88□□□□□ -0.03
LDLR-204ENST00000545707 NTNG1Q9Y2I2 539 aa14.88□□□□□ -0.03
LDLR-204ENST00000545707 COL4A3Q01955 1670 aa14.88□□□□□ -0.03
LDLR-204ENST00000545707 IQCMA0A1B0GVH7 501 aa14.88□□□□□ -0.03
LDLR-204ENST00000545707 RB1P06400 928 aa14.88□□□□□ -0.03
LDLR-204ENST00000545707 CPEP16870 476 aa14.88□□□□□ -0.03
LDLR-204ENST00000545707 PPP2R1BP30154 601 aa14.88□□□□□ -0.03
LDLR-204ENST00000545707 P2RY2P41231 377 aa14.88□□□□□ -0.03
LDLR-204ENST00000545707 MRPS15P82914 257 aaKnown RBP14.88□□□□□ -0.03
LDLR-204ENST00000545707 ZNF234Q14588 700 aa14.88□□□□□ -0.03
LDLR-204ENST00000545707 ZFP69Q49AA0 526 aa14.88□□□□□ -0.03
LDLR-204ENST00000545707 PYDC2Q56P42 97 aa14.88□□□□□ -0.03
LDLR-204ENST00000545707 ZNF765Q7L2R6 523 aa14.88□□□□□ -0.03
LDLR-204ENST00000545707 GLCCI1Q86VQ1 547 aa14.88□□□□□ -0.03
LDLR-204ENST00000545707 TRIM48Q8IWZ4 208 aa14.88□□□□□ -0.03
LDLR-204ENST00000545707 OR52P1PQ8NH57 321 aa14.88□□□□□ -0.03
LDLR-204ENST00000545707 SETD6Q8TBK2 473 aa14.88□□□□□ -0.03
LDLR-204ENST00000545707 RASSF5Q8WWW0 418 aa14.88□□□□□ -0.03
LDLR-204ENST00000545707 FGF11Q92914 225 aa14.88□□□□□ -0.03
LDLR-204ENST00000545707 PPP1R16AQ96I34 528 aa14.88□□□□□ -0.03
LDLR-204ENST00000545707 WDFY2Q96P53 400 aa14.88□□□□□ -0.03
LDLR-204ENST00000545707 KATNB1Q9BVA0 655 aa14.88□□□□□ -0.03
LDLR-204ENST00000545707 ZSCAN32Q9NX65 697 aa14.88□□□□□ -0.03
LDLR-204ENST00000545707 COMMD3Q9UBI1 195 aa14.88□□□□□ -0.03
LDLR-204ENST00000545707 NUFIP1Q9UHK0 495 aaKnown RBP14.88□□□□□ -0.03
LDLR-204ENST00000545707 SLC9A8Q9Y2E8 581 aa14.88□□□□□ -0.03
LDLR-204ENST00000545707 NOX1Q9Y5S8 564 aa14.88□□□□□ -0.03
LDLR-204ENST00000545707 DNMT3AQ9Y6K1 912 aaPredicted RBP14.88□□□□□ -0.03
LDLR-204ENST00000545707 NUMA1Q14980 2115 aa14.88□□□□□ -0.03
LDLR-204ENST00000545707 CPSF4LA6NMK7 179 aaKnown RBP14.87□□□□□ -0.03
LDLR-204ENST00000545707 TBX19O60806 448 aa14.87□□□□□ -0.03
LDLR-204ENST00000545707 NCR1O76036 304 aa14.87□□□□□ -0.03
LDLR-204ENST00000545707 LGI1O95970 557 aa14.87□□□□□ -0.03
LDLR-204ENST00000545707 LALBAP00709 142 aa14.87□□□□□ -0.03
LDLR-204ENST00000545707 EIF2S1P05198 315 aaKnown RBP14.87□□□□□ -0.03
LDLR-204ENST00000545707 ERGP11308 486 aa14.87□□□□□ -0.03
LDLR-204ENST00000545707 MYL12AP19105 171 aa14.87□□□□□ -0.03
LDLR-204ENST00000545707 MAN2A2P49641 1150 aa14.87□□□□□ -0.03
LDLR-204ENST00000545707 WNT4P56705 351 aa14.87□□□□□ -0.03
LDLR-204ENST00000545707 EFNB1P98172 346 aa14.87□□□□□ -0.03
LDLR-204ENST00000545707 FABP5Q01469 135 aa14.87□□□□□ -0.03
LDLR-204ENST00000545707 SCN1BQ07699 218 aa14.87□□□□□ -0.03
LDLR-204ENST00000545707 METRNLQ641Q3 311 aa14.87□□□□□ -0.03
LDLR-204ENST00000545707 C1orf94Q6P1W5 598 aa14.87□□□□□ -0.03
LDLR-204ENST00000545707 TMEM107Q6UX40 140 aa14.87□□□□□ -0.03
LDLR-204ENST00000545707 ERN2Q76MJ5 926 aaKnown RBP14.87□□□□□ -0.03
LDLR-204ENST00000545707 LRRTM4Q86VH4 590 aa14.87□□□□□ -0.03
LDLR-204ENST00000545707 VRK2Q86Y07 508 aa14.87□□□□□ -0.03
LDLR-204ENST00000545707 TMIEQ8NEW7 156 aa14.87□□□□□ -0.03
LDLR-204ENST00000545707 POF1BQ8WVV4 589 aa14.87□□□□□ -0.03
LDLR-204ENST00000545707 OTUB2Q96DC9 234 aa14.87□□□□□ -0.03
LDLR-204ENST00000545707 QRFPRQ96P65 431 aa14.87□□□□□ -0.03
LDLR-204ENST00000545707 FYTTD1Q96QD9 318 aaKnown RBP14.87□□□□□ -0.03
LDLR-204ENST00000545707 FERD3LQ96RJ6 166 aa14.87□□□□□ -0.03
LDLR-204ENST00000545707 ACSS1Q9NUB1 689 aaPredicted RBP14.87□□□□□ -0.03
LDLR-204ENST00000545707 MRPS23Q9Y3D9 190 aaKnown RBP14.87□□□□□ -0.03
LDLR-204ENST00000545707 A0A0C4DFX4 3053 aa14.87□□□□□ -0.03
LDLR-204ENST00000545707 KIAA1549LQ6ZVL6 1849 aa14.87□□□□□ -0.03
LDLR-204ENST00000545707 A0A0A6YYD5 115 aa14.87□□□□□ -0.03
LDLR-204ENST00000545707 SLC35F4A4IF30 521 aa14.87□□□□□ -0.03
LDLR-204ENST00000545707 LRIT2A6NDA9 550 aa14.87□□□□□ -0.03
LDLR-204ENST00000545707 IL1AP01583 271 aa14.87□□□□□ -0.03
LDLR-204ENST00000545707 COX10Q12887 443 aa14.87□□□□□ -0.03
LDLR-204ENST00000545707 ELAVL3Q14576 367 aaKnown RBP14.87□□□□□ -0.03
LDLR-204ENST00000545707 PDZK1Q5T2W1 519 aa14.87□□□□□ -0.03
LDLR-204ENST00000545707 C18orf63Q68DL7 685 aa14.87□□□□□ -0.03
LDLR-204ENST00000545707 COX14Q96I36 57 aa14.87□□□□□ -0.03
LDLR-204ENST00000545707 FAM46AQ96IP4 442 aaKnown RBP14.87□□□□□ -0.03
LDLR-204ENST00000545707 KCTD7Q96MP8 289 aa14.87□□□□□ -0.03
LDLR-204ENST00000545707 DDX31Q9H8H2 851 aaKnown RBP14.87□□□□□ -0.03
LDLR-204ENST00000545707 ATG4BQ9Y4P1 393 aa14.87□□□□□ -0.03
LDLR-204ENST00000545707 RANBP2P49792 3224 aaKnown RBP14.87□□□□□ -0.03
LDLR-204ENST00000545707 EDDM13A0A1B0GTR0 161 aa14.86□□□□□ -0.03
LDLR-204ENST00000545707 NR2F6P10588 404 aa14.86□□□□□ -0.03
LDLR-204ENST00000545707 APEX1P27695 318 aaKnown RBP14.86□□□□□ -0.03
LDLR-204ENST00000545707 SMSP52788 366 aa14.86□□□□□ -0.03
LDLR-204ENST00000545707 CDK3Q00526 305 aa14.86□□□□□ -0.03
LDLR-204ENST00000545707 ALDH6A1Q02252 535 aaKnown RBP14.86□□□□□ -0.03
LDLR-204ENST00000545707 MLF2Q15773 248 aaPredicted RBP14.86□□□□□ -0.03
LDLR-204ENST00000545707 C12orf76Q8N812 135 aaPredicted RBP14.86□□□□□ -0.03
LDLR-204ENST00000545707 ATP6V1C2Q8NEY4 427 aa14.86□□□□□ -0.03
LDLR-204ENST00000545707 OR4F15Q8NGB8 312 aa14.86□□□□□ -0.03
LDLR-204ENST00000545707 CNRIP1Q96F85 164 aaPredicted RBP14.86□□□□□ -0.03
LDLR-204ENST00000545707 C12orf66Q96MD2 445 aa14.86□□□□□ -0.03
LDLR-204ENST00000545707 RANGRFQ9HD47 186 aaPredicted RBP14.86□□□□□ -0.03
LDLR-204ENST00000545707 MBNL1Q9NR56 388 aaKnown RBP14.86□□□□□ -0.03
LDLR-204ENST00000545707 IMP3Q9NV31 184 aaKnown RBP14.86□□□□□ -0.03
LDLR-204ENST00000545707 SF3B6Q9Y3B4 125 aaKnown RBP14.86□□□□□ -0.03
LDLR-204ENST00000545707 GRIP1Q9Y3R0 1128 aa14.86□□□□□ -0.03
LDLR-204ENST00000545707 PLEKHM1Q9Y4G2 1056 aa14.86□□□□□ -0.03
LDLR-204ENST00000545707 HEATR5BQ9P2D3 2071 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms