RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 OMA1Q96E52 524 aa19.33■□□□□ 0.68
SCARB1-210ENST00000545493 TMEM41AQ96HV5 264 aa19.33■□□□□ 0.68
SCARB1-210ENST00000545493 EBPLQ9BY08 206 aa19.33■□□□□ 0.68
SCARB1-210ENST00000545493 MCCC2Q9HCC0 563 aa19.33■□□□□ 0.68
SCARB1-210ENST00000545493 EHD3Q9NZN3 535 aa19.33■□□□□ 0.68
SCARB1-210ENST00000545493 CFL2Q9Y281 166 aa19.33■□□□□ 0.68
SCARB1-210ENST00000545493 STK38LQ9Y2H1 464 aa19.33■□□□□ 0.68
SCARB1-210ENST00000545493 TIMM22Q9Y584 194 aa19.33■□□□□ 0.68
SCARB1-210ENST00000545493 PCDHGB3Q9Y5G1 929 aa19.33■□□□□ 0.68
SCARB1-210ENST00000545493 KIAA1549Q9HCM3 1950 aa19.32■□□□□ 0.68
SCARB1-210ENST00000545493 C15orf38-AP3S2A0A0A6YYH1 394 aa19.32■□□□□ 0.68
SCARB1-210ENST00000545493 G3V2L1 256 aa19.32■□□□□ 0.68
SCARB1-210ENST00000545493 ULK1O75385 1050 aa19.32■□□□□ 0.68
SCARB1-210ENST00000545493 ESRRBO95718 433 aa19.32■□□□□ 0.68
SCARB1-210ENST00000545493 ENO1P06733 434 aaKnown RBP19.32■□□□□ 0.68
SCARB1-210ENST00000545493 GABRA1P14867 456 aa19.32■□□□□ 0.68
SCARB1-210ENST00000545493 TIA1P31483 386 aaKnown RBP eCLIP19.32■□□□□ 0.68
SCARB1-210ENST00000545493 PTGDSP41222 190 aa19.32■□□□□ 0.68
SCARB1-210ENST00000545493 MASP1P48740 699 aa19.32■□□□□ 0.68
SCARB1-210ENST00000545493 EMDP50402 254 aa19.32■□□□□ 0.68
SCARB1-210ENST00000545493 FOXA1P55317 472 aa19.32■□□□□ 0.68
SCARB1-210ENST00000545493 PKNOX1P55347 436 aa19.32■□□□□ 0.68
SCARB1-210ENST00000545493 PLCXD2Q0VAA5 305 aa19.32■□□□□ 0.68
SCARB1-210ENST00000545493 SPIN4Q56A73 249 aa19.32■□□□□ 0.68
SCARB1-210ENST00000545493 RIPPLY2Q5TAB7 128 aa19.32■□□□□ 0.68
SCARB1-210ENST00000545493 DMRTC2Q8IXT2 367 aaPredicted RBP19.32■□□□□ 0.68
SCARB1-210ENST00000545493 GBP7Q8N8V2 638 aaPredicted RBP19.32■□□□□ 0.68
SCARB1-210ENST00000545493 ZNF675Q8TD23 568 aa19.32■□□□□ 0.68
SCARB1-210ENST00000545493 C11orf24Q96F05 449 aaPredicted RBP19.32■□□□□ 0.68
SCARB1-210ENST00000545493 LCORQ96JN0 433 aaPredicted RBP19.32■□□□□ 0.68
SCARB1-210ENST00000545493 NODALQ96S42 347 aa19.32■□□□□ 0.68
SCARB1-210ENST00000545493 ANKRA2Q9H9E1 313 aa19.32■□□□□ 0.68
SCARB1-210ENST00000545493 ALKBH4Q9NXW9 302 aa19.32■□□□□ 0.68
SCARB1-210ENST00000545493 DLGAP4Q9Y2H0 992 aa19.32■□□□□ 0.68
SCARB1-210ENST00000545493 ANKRD17O75179 2603 aaKnown RBP19.32■□□□□ 0.68
SCARB1-210ENST00000545493 CCDC168Q8NDH2 2452 aa19.31■□□□□ 0.68
SCARB1-210ENST00000545493 A0A1W2PPM1 405 aa19.31■□□□□ 0.68
SCARB1-210ENST00000545493 UBFD1O14562 309 aaKnown RBP19.31■□□□□ 0.68
SCARB1-210ENST00000545493 SNX4O95219 450 aa19.31■□□□□ 0.68
SCARB1-210ENST00000545493 SHBGP04278 402 aa19.31■□□□□ 0.68
SCARB1-210ENST00000545493 KRT15P19012 456 aa19.31■□□□□ 0.68
SCARB1-210ENST00000545493 RPP38P78345 283 aaKnown RBP19.31■□□□□ 0.68
SCARB1-210ENST00000545493 ACSF3Q4G176 576 aaPredicted RBP19.31■□□□□ 0.68
SCARB1-210ENST00000545493 DCST1Q5T197 706 aa19.31■□□□□ 0.68
SCARB1-210ENST00000545493 TMEM81Q6P7N7 255 aa19.31■□□□□ 0.68
SCARB1-210ENST00000545493 SH2D5Q6ZV89 423 aa19.31■□□□□ 0.68
SCARB1-210ENST00000545493 OR9A2Q8NGT5 310 aa19.31■□□□□ 0.68
SCARB1-210ENST00000545493 EXOSC8Q96B26 276 aaKnown RBP19.31■□□□□ 0.68
SCARB1-210ENST00000545493 HSPBAP1Q96EW2 488 aa19.31■□□□□ 0.68
SCARB1-210ENST00000545493 GNRHR2Q96P88 292 aa19.31■□□□□ 0.68
SCARB1-210ENST00000545493 PSME2Q9UL46 239 aa19.31■□□□□ 0.68
SCARB1-210ENST00000545493 ZNF780BQ9Y6R6 833 aa19.31■□□□□ 0.68
SCARB1-210ENST00000545493 TEP1Q99973 2627 aaKnown RBP19.31■□□□□ 0.68
SCARB1-210ENST00000545493 GNG14A0A1W2PPG7 69 aa19.3■□□□□ 0.68
SCARB1-210ENST00000545493 GNB5O14775 395 aa19.3■□□□□ 0.68
SCARB1-210ENST00000545493 ACOX3O15254 700 aa19.3■□□□□ 0.68
SCARB1-210ENST00000545493 UGT2B11O75310 529 aa19.3■□□□□ 0.68
SCARB1-210ENST00000545493 GLRA3O75311 464 aa19.3■□□□□ 0.68
SCARB1-210ENST00000545493 TRAPPC6AO75865 159 aa19.3■□□□□ 0.68
SCARB1-210ENST00000545493 HOXD4P09016 255 aaPredicted RBP19.3■□□□□ 0.68
SCARB1-210ENST00000545493 NAGAP17050 411 aa19.3■□□□□ 0.68
SCARB1-210ENST00000545493 PTPN6P29350 595 aa19.3■□□□□ 0.68
SCARB1-210ENST00000545493 WNT3P56703 355 aa19.3■□□□□ 0.68
SCARB1-210ENST00000545493 ACSM2AQ08AH3 577 aa19.3■□□□□ 0.68
SCARB1-210ENST00000545493 CEBPEQ15744 281 aa19.3■□□□□ 0.68
SCARB1-210ENST00000545493 EIPR1Q53HC9 387 aa19.3■□□□□ 0.68
SCARB1-210ENST00000545493 ACSM2BQ68CK6 577 aa19.3■□□□□ 0.68
SCARB1-210ENST00000545493 GALNT18Q6P9A2 607 aa19.3■□□□□ 0.68
SCARB1-210ENST00000545493 SCIMPQ6UWF3 145 aa19.3■□□□□ 0.68
SCARB1-210ENST00000545493 ZYG11AQ6WRX3 759 aa19.3■□□□□ 0.68
SCARB1-210ENST00000545493 PACS2Q86VP3 889 aa19.3■□□□□ 0.68
SCARB1-210ENST00000545493 NAXEQ8NCW5 288 aa19.3■□□□□ 0.68
SCARB1-210ENST00000545493 C16orf78Q8WTQ4 265 aa19.3■□□□□ 0.68
SCARB1-210ENST00000545493 OSBPL11Q9BXB4 747 aa19.3■□□□□ 0.68
SCARB1-210ENST00000545493 PRDM14Q9GZV8 571 aa19.3■□□□□ 0.68
SCARB1-210ENST00000545493 METTL7AQ9H8H3 244 aa19.3■□□□□ 0.68
SCARB1-210ENST00000545493 GALNT9Q9HCQ5 603 aa19.3■□□□□ 0.68
SCARB1-210ENST00000545493 MID1IP1Q9NPA3 183 aa19.3■□□□□ 0.68
SCARB1-210ENST00000545493 PFDN4Q9NQP4 134 aa19.3■□□□□ 0.68
SCARB1-210ENST00000545493 PRODH2Q9UF12 536 aa19.3■□□□□ 0.68
SCARB1-210ENST00000545493 SLC6A5Q9Y345 797 aa19.3■□□□□ 0.68
SCARB1-210ENST00000545493 ZNF469Q96JG9 3925 aaPredicted RBP19.3■□□□□ 0.68
SCARB1-210ENST00000545493 SERTM1A2A2V5 107 aa19.29■□□□□ 0.68
SCARB1-210ENST00000545493 FRG2CA6NGY1 282 aa19.29■□□□□ 0.68
SCARB1-210ENST00000545493 SNPHO15079 494 aa19.29■□□□□ 0.68
SCARB1-210ENST00000545493 TO15178 435 aa19.29■□□□□ 0.68
SCARB1-210ENST00000545493 NME6O75414 186 aaPredicted RBP19.29■□□□□ 0.68
SCARB1-210ENST00000545493 PROCP04070 461 aa19.29■□□□□ 0.68
SCARB1-210ENST00000545493 DRD2P14416 443 aa19.29■□□□□ 0.68
SCARB1-210ENST00000545493 POU3F2P20265 443 aaPredicted RBP19.29■□□□□ 0.68
SCARB1-210ENST00000545493 NHSL2Q5HYW2 709 aa19.29■□□□□ 0.68
SCARB1-210ENST00000545493 TIGD3Q6B0B8 471 aa19.29■□□□□ 0.68
SCARB1-210ENST00000545493 ANGPTL8Q6UXH0 198 aa19.29■□□□□ 0.68
SCARB1-210ENST00000545493 NPSR1Q6W5P4 371 aa19.29■□□□□ 0.68
SCARB1-210ENST00000545493 WDR53Q7Z5U6 358 aaPredicted RBP19.29■□□□□ 0.68
SCARB1-210ENST00000545493 CCDC116Q8IYX3 515 aa19.29■□□□□ 0.68
SCARB1-210ENST00000545493 RELL2Q8NC24 303 aaPredicted RBP19.29■□□□□ 0.68
SCARB1-210ENST00000545493 KAT2AQ92830 837 aa19.29■□□□□ 0.68
SCARB1-210ENST00000545493 BTBD9Q96Q07 612 aa19.29■□□□□ 0.68
SCARB1-210ENST00000545493 TIMP4Q99727 224 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms