RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 FAM227AF5H4B4 570 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 APOC1P02654 83 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 FGF4P08620 206 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 DCKP27707 260 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 ZBTB8BQ8NAP8 495 aaPredicted RBP12.16□□□□□ -0.46
CHD4-211ENST00000544484 KLHDC9Q8NEP7 349 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 PELOQ9BRX2 385 aaKnown RBP12.16□□□□□ -0.46
CHD4-211ENST00000544484 MAGIXQ9H6Y5 334 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 EMCNQ9ULC0 261 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 UBR2Q8IWV8 1755 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 EEF1E1O43324 174 aaKnown RBP12.15□□□□□ -0.46
CHD4-211ENST00000544484 COQ5Q5HYK3 327 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 OGFRL1Q5TC84 451 aaPredicted RBP12.15□□□□□ -0.46
CHD4-211ENST00000544484 NADSYN1Q6IA69 706 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 PLCZ1Q86YW0 608 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 HS3ST5Q8IZT8 346 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 GRPEL2Q8TAA5 225 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 TRIM43Q96BQ3 446 aaPredicted RBP12.15□□□□□ -0.46
CHD4-211ENST00000544484 HS6ST2Q96MM7 605 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 ACTRT3Q9BYD9 372 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 KIAA0100Q14667 2235 aaKnown RBP12.15□□□□□ -0.46
CHD4-211ENST00000544484 NPIPA5A0A0B4J1W7 369 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 LOC285095A0A1B0GVY8 99 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 LRRN3E7EW58 273 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 NPIPA7E9PJI5 369 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 NPC1O15118 1278 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 RDH16O75452 317 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 ZNF806P0C7X5 589 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 NPIPA8P0DM63 369 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 DPPA4Q7L190 304 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 ZNF420Q8TAQ5 688 aaPredicted RBP12.15□□□□□ -0.46
CHD4-211ENST00000544484 THAP6Q8TBB0 222 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 DTD2Q96FN9 168 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 ALOXE3Q9BYJ1 711 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 ATG5Q9H1Y0 275 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 MMP27Q9H306 513 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 LRRN3Q9H3W5 708 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 DMRT3Q9NQL9 472 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 C14orf166Q9Y224 244 aaKnown RBP12.15□□□□□ -0.46
CHD4-211ENST00000544484 PCDHGB6Q9Y5F9 930 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 A0A0A6YYC8 382 aaPredicted RBP12.15□□□□□ -0.46
CHD4-211ENST00000544484 FAM171A2A8MVW0 826 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 I3L1I5 382 aaPredicted RBP12.15□□□□□ -0.46
CHD4-211ENST00000544484 SGK494L7N484 410 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 RPS17P08708 135 aaKnown RBP12.15□□□□□ -0.46
CHD4-211ENST00000544484 STOMP27105 288 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 TMBIM6P55061 237 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 CDK3Q00526 305 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 ZNF791Q3KP31 576 aaPredicted RBP12.15□□□□□ -0.46
CHD4-211ENST00000544484 WDR53Q7Z5U6 358 aaPredicted RBP12.15□□□□□ -0.46
CHD4-211ENST00000544484 CENPSQ8N2Z9 138 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 ACBD7Q8N6N7 88 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.15□□□□□ -0.46
CHD4-211ENST00000544484 OR2L2Q8NH16 312 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 SCGB3A2Q96PL1 93 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 ACPTQ9BZG2 426 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 SMURF1Q9HCE7 757 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 ACTR10Q9NZ32 417 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 CNIH4Q9P003 139 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 EBF1Q9UH73 591 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 DHDHQ9UQ10 334 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 CA5BQ9Y2D0 317 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 KNL1Q8NG31 2342 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 FOSL2P15408 326 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 PSMB5P28074 263 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 GLP1RP43220 463 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 ZNF84P51523 738 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 GALNT11Q8NCW6 608 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 SLC41A3Q96GZ6 507 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 LPAR4Q99677 370 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 PELI2Q9HAT8 420 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 RXFP3Q9NSD7 469 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 GDE1Q9NZC3 331 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 PADI2Q9Y2J8 665 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 ENPP4Q9Y6X5 453 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 DSC1Q08554 894 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 GBX1Q14549 363 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 SLC25A25Q6KCM7 469 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 RPL13AP3Q6NVV1 102 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 PDZD3Q86UT5 571 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 CPXM2Q8N436 756 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 OR52E1Q8NGJ3 308 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 EGLN2Q96KS0 407 aa12.15□□□□□ -0.46
CHD4-211ENST00000544484 MTHFD2LQ9H903 347 aaPredicted RBP12.15□□□□□ -0.46
CHD4-211ENST00000544484 A0A0G2JPF8 293 aa12.15□□□□□ -0.47
CHD4-211ENST00000544484 HNRNPCL3B7ZW38 293 aa12.15□□□□□ -0.47
CHD4-211ENST00000544484 LDB3O75112 727 aa12.15□□□□□ -0.47
CHD4-211ENST00000544484 ADAMTS4O75173 837 aa12.15□□□□□ -0.47
CHD4-211ENST00000544484 CYP17A1P05093 508 aa12.15□□□□□ -0.47
CHD4-211ENST00000544484 HNRNPCL4P0DMR1 293 aa12.15□□□□□ -0.47
CHD4-211ENST00000544484 T-ENOLP0DO92 83 aa12.15□□□□□ -0.47
CHD4-211ENST00000544484 E2F1Q01094 437 aa12.15□□□□□ -0.47
CHD4-211ENST00000544484 MAB21L1Q13394 359 aa12.15□□□□□ -0.47
CHD4-211ENST00000544484 APOFQ13790 326 aa12.15□□□□□ -0.47
CHD4-211ENST00000544484 LRRC37A5PQ49AS3 106 aa12.15□□□□□ -0.47
CHD4-211ENST00000544484 LEG1Q6P5S2 330 aa12.15□□□□□ -0.47
CHD4-211ENST00000544484 OR4C15Q8NGM1 316 aa12.15□□□□□ -0.47
CHD4-211ENST00000544484 CIB4A0PJX0 185 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 VSTM2BA6NLU5 285 aa12.14□□□□□ -0.47
CHD4-211ENST00000544484 TSPAN4O14817 238 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms